##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088448_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 689348 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.38434288632157 31.0 31.0 34.0 30.0 34.0 2 31.610900445058228 31.0 31.0 34.0 30.0 34.0 3 31.726155729762034 31.0 31.0 34.0 30.0 34.0 4 35.427685291028624 37.0 35.0 37.0 33.0 37.0 5 35.29517166946158 37.0 35.0 37.0 33.0 37.0 6 35.34676534928657 37.0 35.0 37.0 33.0 37.0 7 35.19578355199406 37.0 35.0 37.0 32.0 37.0 8 35.227632487509936 37.0 35.0 37.0 32.0 37.0 9 36.77830355640402 39.0 37.0 39.0 32.0 39.0 10 36.6104986160836 39.0 35.0 39.0 32.0 39.0 11 36.64915543383023 39.0 35.0 39.0 32.0 39.0 12 36.507338818709854 38.0 35.0 39.0 32.0 39.0 13 36.5227780453414 38.0 35.0 39.0 32.0 39.0 14 37.49260170479932 39.0 36.0 41.0 32.0 41.0 15 37.50434468512275 39.0 36.0 41.0 32.0 41.0 16 37.37490063074093 39.0 36.0 41.0 32.0 41.0 17 37.439779327712564 39.0 36.0 41.0 32.0 41.0 18 37.31345996506844 39.0 36.0 41.0 32.0 41.0 19 37.397181104463925 39.0 36.0 41.0 32.0 41.0 20 37.31378781109106 39.0 36.0 41.0 31.0 41.0 21 37.141664297278005 39.0 36.0 40.0 31.0 41.0 22 37.05351288463882 39.0 36.0 40.0 31.0 41.0 23 36.868552603329526 39.0 36.0 40.0 30.0 41.0 24 37.0626737148726 39.0 36.0 40.0 31.0 41.0 25 37.02226886855406 39.0 36.0 41.0 31.0 41.0 26 36.85853299059401 39.0 36.0 40.0 30.0 41.0 27 36.79202521803211 39.0 35.0 40.0 30.0 41.0 28 36.614667773026106 39.0 35.0 40.0 30.0 41.0 29 36.45048944800014 39.0 35.0 40.0 30.0 41.0 30 36.26846092249488 38.0 35.0 40.0 30.0 41.0 31 36.00566042115158 38.0 35.0 40.0 29.0 41.0 32 35.876526805038964 38.0 35.0 40.0 29.0 41.0 33 35.66192257031282 38.0 34.0 40.0 27.0 41.0 34 35.54845883356447 38.0 34.0 40.0 27.0 41.0 35 35.303436000394576 38.0 34.0 40.0 26.0 41.0 36 35.16239257965498 38.0 34.0 40.0 25.0 41.0 37 35.00085152927114 38.0 33.0 40.0 25.0 41.0 38 34.94209310827043 38.0 33.0 40.0 25.0 41.0 39 34.84616913373216 38.0 33.0 40.0 24.0 41.0 40 34.73528754707347 38.0 33.0 40.0 24.0 41.0 41 34.53858718673297 38.0 33.0 40.0 23.0 41.0 42 34.320903230298775 38.0 33.0 40.0 22.0 41.0 43 33.99505764867672 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 1.0 14 1.0 15 3.0 16 9.0 17 24.0 18 62.0 19 138.0 20 295.0 21 562.0 22 1128.0 23 1908.0 24 3023.0 25 4609.0 26 6822.0 27 9325.0 28 12820.0 29 16421.0 30 20751.0 31 25843.0 32 31552.0 33 38704.0 34 46906.0 35 57321.0 36 72072.0 37 95162.0 38 122417.0 39 121468.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.61439505155597 21.292873846011013 13.374086818268857 23.718644284164167 2 19.070048799735403 23.41531418093619 34.785913645937896 22.72872337339051 3 19.616217063079898 25.117647400152027 32.25758252725764 23.008553009510436 4 13.70120751782844 16.452793074035174 36.824796764478904 33.02120264365748 5 12.496590981623216 38.65812332813035 35.348474210413315 13.496811479833118 6 32.21174210993576 37.92757794321591 13.832490991487608 16.02818895536072 7 26.3219738071337 32.70365620847526 21.857610379663104 19.116759604727946 8 27.093282347957782 34.35652239507477 19.132861776635313 19.41733348033214 9 24.875969756929734 14.367779408948747 21.42720367651752 39.329047157603995 10 16.476148476531446 27.395306869679754 33.74318921647702 22.38535543731178 11 33.544740827564596 22.61049571479137 23.282725125771016 20.562038331873016 12 21.14360236049136 27.279980503316175 30.67956968033562 20.896847455856836 13 30.937059366241726 21.086591968062578 26.0895802990652 21.886768366630495 14 20.7680300805979 22.698985127976 27.506571426913546 29.026413364512553 15 23.016531563158228 29.5576399728439 25.19598229051219 22.229846173485672 16 22.293964731891585 28.2741082878314 26.150942629847336 23.28098435042968 17 21.947985632800847 26.93574217956678 26.750204541102608 24.366067646529764 18 22.80444710073867 25.88010699965765 29.10677915943761 22.20866674016607 19 22.873787985168594 25.137521251965627 29.879683410991255 22.109007351874524 20 23.654235596534697 25.023935660943387 29.815419787973564 21.506408954548355 21 22.78022131057173 25.67846718928611 30.095684617928825 21.445626882213336 22 21.74097843179352 26.272506774517367 29.628721632615168 22.357793161073943 23 22.622971271404282 26.213030283688354 30.404527176404372 20.759471268502992 24 22.534481858219653 26.40524089429432 28.204622338789697 22.855654908696334 25 22.347638638249474 26.4570289606991 29.446665544833667 21.74866685621776 26 22.254362092876168 27.02104017129229 29.338592409058993 21.386005326772544 27 21.475945386074958 27.072393043861737 28.778643007595583 22.67301856246772 28 21.668010932069144 26.8250578807801 29.221090073518745 22.285841113632014 29 22.238695114804134 26.767177100680644 28.65388744146643 22.340240343048794 30 21.972356487579567 26.822301653156316 29.94960455386829 21.255737305395822 31 22.496619994545572 26.76064919315063 29.698642775492207 21.044088036811594 32 21.962927287813994 26.482850461595596 28.95779780314152 22.596424447448893 33 21.645670981855318 26.574676360851125 29.644968869134313 22.134683788159247 34 21.378026773124752 26.90005628506937 30.020976342863108 21.70094059894277 35 20.93528957797803 28.784590656678482 28.90644493057208 21.373674834771407 36 22.87712447123949 26.86248455061885 28.78821727197294 21.472173706168725 37 21.820328774436135 27.346565160122317 28.76210564185288 22.071000423588664 38 21.687594654659183 26.121349449044608 29.985145383753924 22.20591051254229 39 21.24094071499446 26.103796631019456 30.651427145650672 22.003835508335413 40 20.35329035552435 26.829699948357 30.254965561661162 22.562044134457487 41 21.57052751295427 25.377022926011243 30.417002733017284 22.6354468280172 42 20.342990768088107 27.27229207889194 29.951200264597848 22.433516888422105 43 20.895396809739058 26.620516778173 29.332064501528983 23.15202191055896 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 40.0 1 73.0 2 106.0 3 279.5 4 453.0 5 453.0 6 720.0 7 987.0 8 1089.5 9 1192.0 10 1808.0 11 2424.0 12 2424.0 13 4609.0 14 6794.0 15 10838.5 16 14883.0 17 13720.5 18 12558.0 19 12558.0 20 13396.0 21 14234.0 22 11498.0 23 8762.0 24 9997.0 25 11232.0 26 11232.0 27 12617.5 28 14003.0 29 15710.5 30 17418.0 31 19381.0 32 21344.0 33 21344.0 34 24016.5 35 26689.0 36 29563.5 37 32438.0 38 34881.0 39 37324.0 40 37324.0 41 38445.5 42 39567.0 43 42042.5 44 44518.0 45 45567.0 46 46616.0 47 46616.0 48 56856.0 49 67096.0 50 64117.0 51 61138.0 52 56658.0 53 52178.0 54 52178.0 55 47027.5 56 41877.0 57 36009.5 58 30142.0 59 26733.0 60 23324.0 61 23324.0 62 20719.5 63 18115.0 64 15663.0 65 13211.0 66 11387.5 67 9564.0 68 9564.0 69 8232.5 70 6901.0 71 5727.5 72 4554.0 73 3875.0 74 3196.0 75 3196.0 76 2594.5 77 1993.0 78 1570.5 79 1148.0 80 891.0 81 634.0 82 634.0 83 483.5 84 333.0 85 256.5 86 180.0 87 135.5 88 91.0 89 91.0 90 74.5 91 58.0 92 38.5 93 19.0 94 14.5 95 10.0 96 10.0 97 6.0 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 689348.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.25247261576359 #Duplication Level Percentage of deduplicated Percentage of total 1 87.14183927163567 52.505112844015 2 7.355850912829371 8.864164113817825 3 1.9511910421642151 3.526922545083677 4 0.8997555658449454 2.1684999036781374 5 0.5155580068477913 1.5531822344717097 6 0.35385499015318383 1.2792382862493603 7 0.275851593869634 1.16345184239514 8 0.2097275429179911 1.0109282429150113 9 0.15266256363445233 0.8278467241353396 >10 0.989940296212473 11.237992944489752 >50 0.08993996100949586 3.720534780452796 >100 0.058025684437138826 6.488202053376855 >500 0.003384831592146445 1.307866769236465 >1k 0.0016924157960732226 1.6143661769523845 >5k 7.253210554599525E-4 2.7316905387304735 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7366 1.0685459303573812 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6101 0.8850391964581024 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5285 0.7666664732471843 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2660 0.3858718673297087 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1676 0.24312828934007205 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1561 0.2264458589855922 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1426 0.20686213639555057 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1368 0.1984483889124216 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1259 0.18263634622861022 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1132 0.16421314053279332 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 884 0.128237116811828 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 799 0.11590662481069068 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 721 0.10459158509199998 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 697 0.10111003440932591 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.4506461177808596E-4 0.0 2 0.0 0.0 0.0 1.4506461177808596E-4 0.0 3 0.0 0.0 0.0 1.4506461177808596E-4 0.0 4 0.0 0.0 0.0 2.901292235561719E-4 0.0 5 0.0 0.0 0.0 4.351938353342579E-4 0.0 6 0.0 0.0 0.0 4.351938353342579E-4 0.0 7 0.0 0.0 0.0 4.351938353342579E-4 0.0 8 0.0 0.0 0.0 4.351938353342579E-4 0.0 9 2.901292235561719E-4 0.0 0.0 5.802584471123438E-4 0.0 10 4.351938353342579E-4 0.0 0.0 5.802584471123438E-4 0.0 11 4.351938353342579E-4 0.0 0.0 8.703876706685158E-4 0.0 12 4.351938353342579E-4 0.0 0.0 0.0010154522824466017 0.0 13 4.351938353342579E-4 0.0 0.0 0.0011605168942246877 0.0 14 4.351938353342579E-4 0.0 0.0 0.0014506461177808596 0.0 15 4.351938353342579E-4 0.0 0.0 0.0014506461177808596 0.0 16 4.351938353342579E-4 0.0 0.0 0.0018858399531151175 1.4506461177808596E-4 17 4.351938353342579E-4 0.0 0.0 0.0026111630120055473 1.4506461177808596E-4 18 4.351938353342579E-4 0.0 0.0 0.003046356847339805 1.4506461177808596E-4 19 4.351938353342579E-4 0.0 0.0 0.004061809129786407 1.4506461177808596E-4 20 4.351938353342579E-4 0.0 0.0 0.006382842918235782 1.4506461177808596E-4 21 4.351938353342579E-4 0.0 0.0 0.011024910495134533 1.4506461177808596E-4 22 4.351938353342579E-4 0.0 0.0 0.01682749496625797 1.4506461177808596E-4 23 4.351938353342579E-4 0.0 0.0 0.019583722590041604 1.4506461177808596E-4 24 5.802584471123438E-4 0.0 0.0 0.02553137167294313 1.4506461177808596E-4 25 5.802584471123438E-4 0.0 0.0 0.030028374638063793 1.4506461177808596E-4 26 5.802584471123438E-4 0.0 0.0 0.03626615294452149 1.4506461177808596E-4 27 5.802584471123438E-4 0.0 0.0 0.07630398579527321 1.4506461177808596E-4 28 5.802584471123438E-4 0.0 0.0 0.1621822359679001 1.4506461177808596E-4 29 5.802584471123438E-4 0.0 0.0 0.2718510824721331 1.4506461177808596E-4 30 5.802584471123438E-4 0.0 0.0 0.4111131097790956 1.4506461177808596E-4 31 5.802584471123438E-4 0.0 0.0 0.5725700226881053 1.4506461177808596E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGAGC 40 0.0019304068 23.125002 37 GCGCTAT 45 0.0038242787 20.555555 6 TGCACCG 65 6.89701E-5 19.923077 5 GGTATCA 2040 0.0 19.860294 1 GTAAGAT 105 2.2555469E-8 19.38095 3 CTAATAC 225 0.0 18.911112 3 CATATAG 60 9.2317007E-4 18.5 3 ATTAGAC 60 9.2317007E-4 18.5 3 CGAGTAA 60 9.2317007E-4 18.5 10 CGTAGTA 90 2.1496744E-6 18.5 2 AATACTG 260 0.0 18.5 5 CTTACTC 60 9.2317007E-4 18.5 3 TTGCGAT 50 0.007032096 18.499998 11 GCGATAA 50 0.007032096 18.499998 13 ACCGTTA 100 2.8707836E-7 18.499998 8 AGTAACG 50 0.007032096 18.499998 12 TAATCGG 50 0.007032096 18.499998 16 TAATACT 260 0.0 17.788462 4 CTACACT 95 3.6021502E-6 17.526316 4 TAAGATT 160 3.45608E-11 17.34375 4 >>END_MODULE