##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088438_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3377056 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.310921109984555 31.0 31.0 34.0 30.0 34.0 2 31.523993679702084 31.0 31.0 34.0 30.0 34.0 3 31.629710907962437 31.0 31.0 34.0 30.0 34.0 4 35.339737333345965 37.0 35.0 37.0 33.0 37.0 5 35.20646118986478 37.0 35.0 37.0 33.0 37.0 6 35.26782617759374 37.0 35.0 37.0 32.0 37.0 7 35.10109308225863 37.0 35.0 37.0 32.0 37.0 8 35.1466460727924 37.0 35.0 37.0 32.0 37.0 9 36.67195657993234 39.0 35.0 39.0 32.0 39.0 10 36.51887472401997 38.0 35.0 39.0 32.0 39.0 11 36.56141799247629 38.0 35.0 39.0 32.0 39.0 12 36.413698203405566 38.0 35.0 39.0 32.0 39.0 13 36.43916950148295 38.0 35.0 39.0 32.0 39.0 14 37.363908682592175 39.0 36.0 41.0 32.0 41.0 15 37.38252756246861 39.0 36.0 41.0 32.0 41.0 16 37.239941830991256 39.0 36.0 40.0 32.0 41.0 17 37.33294502667412 39.0 36.0 40.0 32.0 41.0 18 37.21230089166422 39.0 36.0 40.0 31.0 41.0 19 37.299451652563654 39.0 36.0 40.0 31.0 41.0 20 37.212301483896034 39.0 36.0 40.0 31.0 41.0 21 37.063539366833126 39.0 36.0 40.0 31.0 41.0 22 36.97551269508116 39.0 36.0 40.0 31.0 41.0 23 36.79204075976235 39.0 35.0 40.0 30.0 41.0 24 36.9713481209669 39.0 36.0 40.0 31.0 41.0 25 36.93751895141804 39.0 36.0 40.0 31.0 41.0 26 36.75668540882947 39.0 35.0 40.0 30.0 41.0 27 36.6793180213772 39.0 35.0 40.0 30.0 41.0 28 36.490218107132364 39.0 35.0 40.0 30.0 41.0 29 36.3083164744677 38.0 35.0 40.0 30.0 41.0 30 36.133513036206686 38.0 35.0 40.0 30.0 41.0 31 35.87196214691139 38.0 35.0 40.0 29.0 41.0 32 35.71835113187344 38.0 34.0 40.0 28.0 41.0 33 35.50953552443312 38.0 34.0 40.0 27.0 41.0 34 35.390475609524984 38.0 34.0 40.0 27.0 41.0 35 35.16120401912198 38.0 34.0 40.0 26.0 41.0 36 35.00593001715103 38.0 33.0 40.0 25.0 41.0 37 34.82764662475245 38.0 33.0 40.0 25.0 41.0 38 34.747874183904564 38.0 33.0 40.0 24.0 41.0 39 34.65054799209726 38.0 33.0 40.0 24.0 41.0 40 34.525459157325194 38.0 33.0 40.0 23.0 41.0 41 34.31032887817081 38.0 33.0 40.0 22.0 41.0 42 34.080566919826026 38.0 33.0 40.0 21.0 41.0 43 33.743949463674866 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 2.0 14 14.0 15 23.0 16 46.0 17 134.0 18 342.0 19 767.0 20 1609.0 21 3360.0 22 6185.0 23 10186.0 24 16256.0 25 24339.0 26 35422.0 27 48814.0 28 65796.0 29 86322.0 30 107776.0 31 131397.0 32 160497.0 33 194120.0 34 234031.0 35 282730.0 36 354213.0 37 465203.0 38 585117.0 39 562351.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.55338259122739 21.41400675618053 13.875310329470402 23.157300323121678 2 19.145522016809906 23.8138485118399 34.60034420513015 22.440285266220044 3 19.963246093638958 24.94915689878995 32.419835501691416 22.667761505879678 4 14.053779386542598 16.4798273999602 35.98237636568656 33.484016847810636 5 12.713114618176306 38.76308240076563 34.6507135208892 13.873089460168858 6 32.46650336861456 37.36426046828954 13.510495532203198 16.65874063089271 7 26.186447604066977 32.93113883808856 21.437133408507293 19.445280149337172 8 27.40472766812277 34.25009831048108 18.816093070413995 19.52908095098216 9 24.835981399183193 14.393276273772186 21.497896392597575 39.27284593444704 10 16.61938682686932 27.675259160641698 33.104721982697356 22.60063202979163 11 33.36939038026021 22.692309514559426 23.18862938606881 20.749670719111556 12 21.288720115982677 27.298807008234395 30.630762415547743 20.781710460235185 13 31.562876067201728 21.026065306586567 26.050382344858953 21.360676281352752 14 20.726129504515175 22.97299778268409 27.651569888091878 28.64930282470886 15 22.983894848057005 29.528026778353688 25.34891337306814 22.139165000521164 16 22.006593909014242 28.233319198734048 26.46601063174552 23.29407626050619 17 21.94861441444856 26.787947845697552 26.98815181033421 24.275285929519676 18 23.049484521429317 25.494395118114717 29.37520135881667 22.080919001639298 19 23.02401855343826 24.894908464650868 30.344596003145934 21.736476978764934 20 23.71835113187344 24.70930301422304 30.188661366586757 21.383684487316764 21 22.5753437313447 25.550509082467094 30.623448352647987 21.25069883354022 22 21.548265708356627 25.991692172116775 30.132280897918186 22.32776122160841 23 22.415974150265793 26.08748566799011 30.969548624600833 20.526991557143262 24 22.354056314138706 26.15396368908304 28.753121061658437 22.738858935119822 25 22.291427799835123 26.235158670747538 29.77614229672235 21.697271232694987 26 22.031971042233234 26.847230250253475 29.805931556953745 21.31486715055954 27 21.21007173111728 26.957888764651816 29.36178730823534 22.470252195995567 28 21.560761799626658 26.64732240152369 29.538598116229046 22.2533176826206 29 21.83863696663603 26.62185643353264 29.081424767608237 22.458081832223094 30 21.72081244729137 26.828486113348433 30.542993660750668 20.907707778609534 31 22.27602977267774 26.4769965318905 30.389487174627845 20.85748652080392 32 21.867241763239935 26.38312778941184 29.424030871859983 22.325599575488237 33 21.56342684278851 26.43154274018553 29.945106033183933 22.059924383842024 34 20.94489993651275 26.92374660058939 30.454810343683963 21.676543119213896 35 20.62627922071769 28.67059355841301 29.41517700624449 21.28795021462481 36 22.609959680858122 26.489996020202213 29.401674120891098 21.498370178048575 37 21.561650147347276 27.008702254271178 29.3635047804952 22.066142817886348 38 21.362156860887115 25.813430396179392 30.669672045710822 22.154740697222667 39 20.90818156406053 25.7049927510826 31.317188699269423 22.069636985587447 40 19.990103806392312 26.331396340481177 31.033628106848095 22.644871746278415 41 21.103706897368596 25.25815384761165 31.15476912434973 22.48337013067003 42 19.948617967839443 26.938552395933023 30.62036874721651 22.49246088901102 43 20.228891673694484 26.655880151232314 30.080993622847828 23.03423455222537 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 320.0 1 510.0 2 700.0 3 1680.5 4 2661.0 5 2661.0 6 4142.0 7 5623.0 8 6347.0 9 7071.0 10 10700.5 11 14330.0 12 14330.0 13 27214.5 14 40099.0 15 63337.0 16 86575.0 17 79031.0 18 71487.0 19 71487.0 20 75016.5 21 78546.0 22 62730.5 23 46915.0 24 52402.5 25 57890.0 26 57890.0 27 63213.5 28 68537.0 29 75289.0 30 82041.0 31 90339.5 32 98638.0 33 98638.0 34 110003.5 35 121369.0 36 132664.5 37 143960.0 38 153978.0 39 163996.0 40 163996.0 41 170515.5 42 177035.0 43 189788.0 44 202541.0 45 213354.0 46 224167.0 47 224167.0 48 282203.0 49 340239.0 50 323442.0 51 306645.0 52 283633.0 53 260621.0 54 260621.0 55 233812.5 56 207004.0 57 178179.5 58 149355.0 59 133013.5 60 116672.0 61 116672.0 62 103717.5 63 90763.0 64 78959.0 65 67155.0 66 57691.5 67 48228.0 68 48228.0 69 41433.0 70 34638.0 71 29409.0 72 24180.0 73 19885.5 74 15591.0 75 15591.0 76 12671.0 77 9751.0 78 7553.5 79 5356.0 80 4267.0 81 3178.0 82 3178.0 83 2373.5 84 1569.0 85 1184.0 86 799.0 87 609.0 88 419.0 89 419.0 90 332.5 91 246.0 92 163.0 93 80.0 94 62.0 95 44.0 96 44.0 97 29.5 98 15.0 99 11.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3377056.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.945555654057344 #Duplication Level Percentage of deduplicated Percentage of total 1 78.43330179883063 36.82094934728479 2 11.953659577163803 11.223423818987976 3 4.0270578326203275 5.671574028101553 4 1.697032598199786 3.1867255314215024 5 0.9530415198733282 2.2370531855920364 6 0.5629813985687052 1.5857684747223715 7 0.3813855744418594 1.2533050397430456 8 0.26867475687727466 1.0090468601457938 9 0.19941434896994342 0.8425455676007481 >10 1.2759509957179178 11.568789345742006 >50 0.14004457550105096 4.554421196562168 >100 0.09448121743917479 8.675675683609903 >500 0.008100717765671974 2.6221775644784984 >1k 0.00424021945517 3.814484299528572 >5k 3.7972114523910445E-4 1.3350353379130329 >10k+ 2.53147430159403E-4 3.5990247185661746 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 42295 1.2524222281182191 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 34366 1.01763192555883 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 29197 0.8645696132963149 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15279 0.4524354941108468 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 8559 0.2534456046923711 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8117 0.24035728160859637 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 7918 0.234464575061829 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 6980 0.20668890299716677 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 6945 0.20565249732311222 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 6416 0.1899879658495447 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4618 0.13674632579382753 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4586 0.13579875489183477 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3925 0.11622549344754722 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3778 0.11187258961651805 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3670 0.10867453782229256 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3546 0.10500270057707069 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3487 0.10325561672652156 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.9611590687273174E-5 0.0 0.0 0.0 0.0 2 2.9611590687273174E-5 0.0 0.0 0.0 0.0 3 5.922318137454635E-5 0.0 0.0 0.0 0.0 4 5.922318137454635E-5 0.0 0.0 2.9611590687273174E-5 0.0 5 5.922318137454635E-5 0.0 0.0 2.9611590687273174E-5 2.9611590687273174E-5 6 5.922318137454635E-5 0.0 0.0 5.922318137454635E-5 2.9611590687273174E-5 7 5.922318137454635E-5 0.0 0.0 5.922318137454635E-5 2.9611590687273174E-5 8 1.4805795343636588E-4 0.0 0.0 5.922318137454635E-5 2.9611590687273174E-5 9 1.7766954412363906E-4 0.0 0.0 1.7766954412363906E-4 2.9611590687273174E-5 10 2.0728113481091224E-4 0.0 0.0 2.9611590687273176E-4 5.922318137454635E-5 11 2.0728113481091224E-4 0.0 0.0 5.330086323709172E-4 5.922318137454635E-5 12 2.368927254981854E-4 0.0 0.0 7.995129485563758E-4 5.922318137454635E-5 13 2.368927254981854E-4 0.0 0.0 8.587361299309221E-4 5.922318137454635E-5 14 2.368927254981854E-4 0.0 0.0 0.001036405674054561 5.922318137454635E-5 15 2.368927254981854E-4 0.0 0.0 0.0014509679436763856 5.922318137454635E-5 16 2.368927254981854E-4 0.0 0.0 0.00186553021329821 5.922318137454635E-5 17 2.368927254981854E-4 0.0 0.0 0.002635431571167313 5.922318137454635E-5 18 2.368927254981854E-4 0.0 0.0 0.003227663384912776 5.922318137454635E-5 19 2.368927254981854E-4 0.0 5.922318137454635E-5 0.004086399514843698 5.922318137454635E-5 20 2.368927254981854E-4 0.0 5.922318137454635E-5 0.006692219495323738 5.922318137454635E-5 21 2.368927254981854E-4 0.0 5.922318137454635E-5 0.011459685595974718 5.922318137454635E-5 22 2.9611590687273176E-4 0.0 5.922318137454635E-5 0.0186553021329821 5.922318137454635E-5 23 2.9611590687273176E-4 0.0 5.922318137454635E-5 0.022978594373323984 5.922318137454635E-5 24 2.9611590687273176E-4 0.0 5.922318137454635E-5 0.029966929775520453 5.922318137454635E-5 25 2.9611590687273176E-4 0.0 5.922318137454635E-5 0.035741189959538726 5.922318137454635E-5 26 3.257274975600049E-4 0.0 5.922318137454635E-5 0.045542626477026144 5.922318137454635E-5 27 3.257274975600049E-4 0.0 5.922318137454635E-5 0.09955416789061242 5.922318137454635E-5 28 3.257274975600049E-4 0.0 5.922318137454635E-5 0.20725152322022494 5.922318137454635E-5 29 3.257274975600049E-4 0.0 5.922318137454635E-5 0.3483803644357689 5.922318137454635E-5 30 3.257274975600049E-4 0.0 5.922318137454635E-5 0.543283854339401 5.922318137454635E-5 31 3.257274975600049E-4 0.0 5.922318137454635E-5 0.7931168449679247 5.922318137454635E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11980 0.0 21.12521 1 GTATTAG 625 0.0 17.464 1 GTATTGG 1545 0.0 16.28479 1 ACCGTTA 600 0.0 15.724999 8 TCTAACG 220 1.8189894E-12 15.136364 2 TAATACT 740 0.0 15.0 4 TATAGCG 75 0.004106598 14.799999 5 CCGTTTA 615 0.0 14.739838 27 TCTATAC 265 0.0 14.6603775 3 CGTTATT 385 0.0 14.415584 10 CGTTTAC 630 0.0 14.388888 28 AATTACG 155 1.2122655E-7 14.322581 16 TTGGACC 2095 0.0 14.128878 4 CCGTTAT 670 0.0 14.082089 9 CTCTAAT 645 0.0 14.054264 1 ATAACGC 185 4.9094524E-9 14.0 3 TGGACCC 2030 0.0 13.852217 5 TGTTACG 415 0.0 13.819277 16 ATTGGAC 1800 0.0 13.669444 3 AACCGTA 95 0.0012459485 13.631579 7 >>END_MODULE