##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088436_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 699936 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.467156997211173 31.0 31.0 34.0 30.0 34.0 2 31.66581373154117 31.0 31.0 34.0 30.0 34.0 3 31.792986787363414 31.0 31.0 34.0 30.0 34.0 4 35.4807110935857 37.0 35.0 37.0 33.0 37.0 5 35.353245153842636 37.0 35.0 37.0 33.0 37.0 6 35.39744490924885 37.0 35.0 37.0 33.0 37.0 7 35.242826486993096 37.0 35.0 37.0 32.0 37.0 8 35.26985038632103 37.0 35.0 37.0 32.0 37.0 9 36.8330047318612 39.0 37.0 39.0 32.0 39.0 10 36.68437257120651 39.0 35.0 39.0 32.0 39.0 11 36.722891807250946 39.0 35.0 39.0 32.0 39.0 12 36.572163740684864 38.0 35.0 39.0 32.0 39.0 13 36.57604552416221 39.0 35.0 39.0 32.0 39.0 14 37.56539169295478 39.0 36.0 41.0 32.0 41.0 15 37.59676884743748 39.0 36.0 41.0 32.0 41.0 16 37.46133789375028 39.0 36.0 41.0 32.0 41.0 17 37.499515670004115 39.0 36.0 41.0 32.0 41.0 18 37.361414472180314 39.0 36.0 41.0 32.0 41.0 19 37.42960784986056 39.0 36.0 41.0 32.0 41.0 20 37.32554547844374 39.0 36.0 41.0 31.0 41.0 21 37.16750245736753 39.0 36.0 40.0 31.0 41.0 22 37.064867359301424 39.0 36.0 40.0 31.0 41.0 23 36.85088350934942 39.0 36.0 40.0 30.0 41.0 24 37.07359101403557 39.0 36.0 41.0 31.0 41.0 25 37.05649230786815 39.0 36.0 41.0 31.0 41.0 26 36.88353935216934 39.0 36.0 40.0 30.0 41.0 27 36.82551261829653 39.0 35.0 40.0 30.0 41.0 28 36.63783688794404 39.0 35.0 40.0 30.0 41.0 29 36.47772939240159 39.0 35.0 40.0 30.0 41.0 30 36.32862147396333 38.0 35.0 40.0 30.0 41.0 31 36.0509260846706 38.0 35.0 40.0 29.0 41.0 32 35.908997394047454 38.0 35.0 40.0 29.0 41.0 33 35.702285637544 38.0 34.0 40.0 27.0 41.0 34 35.56933205321629 38.0 34.0 40.0 27.0 41.0 35 35.33871096785992 38.0 34.0 40.0 26.0 41.0 36 35.190475986375894 38.0 34.0 40.0 25.0 41.0 37 35.03229723860467 38.0 33.0 40.0 25.0 41.0 38 34.96288374937137 38.0 33.0 40.0 25.0 41.0 39 34.86884372285466 38.0 33.0 40.0 24.0 41.0 40 34.76127388789832 38.0 33.0 40.0 24.0 41.0 41 34.56597603209436 38.0 33.0 40.0 23.0 41.0 42 34.355165329401544 38.0 33.0 40.0 22.0 41.0 43 34.0355989690486 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 4.0 15 9.0 16 15.0 17 31.0 18 65.0 19 125.0 20 361.0 21 658.0 22 1203.0 23 1985.0 24 3142.0 25 4768.0 26 6856.0 27 9408.0 28 12791.0 29 16476.0 30 20690.0 31 25454.0 32 31000.0 33 38456.0 34 46906.0 35 57164.0 36 72499.0 37 96330.0 38 125849.0 39 127689.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.85139784208842 20.911911946235083 13.120628171718558 24.11606203995794 2 19.06931490879166 23.276699583961964 34.59673455858822 23.05725094865816 3 19.66894116033466 24.911849083344766 31.90748868467974 23.51172107164084 4 14.167723906185708 16.37135395236136 36.067297581493165 33.39362455995977 5 13.003331733187034 38.32636126731587 34.86947378045993 13.80083321903717 6 32.955584510583826 37.16011178164861 13.871982581264572 16.012321126502997 7 26.835310656974354 32.28695194989256 21.71769990399122 19.160037489141864 8 27.379646139075575 34.235415809445435 19.053742056416585 19.331195995062405 9 25.080864536186166 14.490610570109267 21.13293215379692 39.29559273990765 10 16.48164975083436 27.404362684588307 33.4847757509258 22.629211813651533 11 33.708224751977326 22.54648996479678 23.00696063640104 20.73832464682485 12 21.160363233209896 26.709727746536828 30.924827412792027 21.205081607461253 13 31.34229415260824 20.992919352626526 25.639201298404423 22.02558519636081 14 21.080641658665936 22.491627805970833 27.089476752160195 29.338253783203033 15 23.267413020619028 29.3639704201527 24.657111507337813 22.71150505189046 16 22.654785580395924 27.99055913683537 25.893510263795548 23.461145018973166 17 22.312182828144287 26.650865221963148 26.698583870525304 24.338368079367257 18 23.26441274630823 25.674918849723404 28.50060576967037 22.560062634297992 19 23.16811822795227 25.190731724043342 29.397973529008365 22.243176518996023 20 23.97033443057651 24.88370365290541 29.176667581035982 21.9692943354821 21 23.169546930005026 25.606055410780414 29.427119050884652 21.797278608329904 22 22.27332213230924 25.864507612124537 28.993079367256435 22.86909088830979 23 22.92080990261967 25.984518584556305 29.632709276276685 21.46196223654734 24 22.746508252183055 26.145819046312806 28.105426781877203 23.002245919626937 25 22.96195652173913 26.0865279111233 28.693766287203402 22.257749279934167 26 22.679930736524483 26.689440177387645 28.741199195355005 21.889429890732867 27 21.99372514058428 26.868027933982535 28.46403099711974 22.674215928313444 28 22.287180542221 26.465562565720298 28.576469848671877 22.670787043386824 29 22.41347780368491 26.501280117039272 28.324303936359897 22.760938142915922 30 22.302753394596078 26.75958944817812 29.26624719974398 21.671409957481828 31 22.766652951126957 26.461562199972573 29.213242353586615 21.558542495313855 32 22.48577012755452 26.382269236044436 28.459316280345632 22.67264435605541 33 22.21117359301422 26.392698761029582 28.846637406848625 22.549490239107577 34 21.882572120879622 26.750017144424632 29.223957618982304 22.143453115713438 35 21.444103460887852 28.303016275773786 28.61561628491748 21.637263978420883 36 23.058965391121475 26.57485827275637 28.33959104832442 22.026585287797744 37 22.267607324098204 26.962893750285737 28.387881177707676 22.38161774790838 38 22.09573446715128 25.938514378457462 29.48383852237919 22.48191263201207 39 21.718271384812326 25.74321080784529 30.131754903305445 22.40676290403694 40 20.989490467699902 26.231826909888905 29.781865770584737 22.996816851826452 41 21.906574315365976 25.323315274539386 29.900019430347918 22.870090979746717 42 20.836905088465233 26.645721894573214 29.607706990353407 22.909666026608146 43 21.150933799661683 26.41827252777397 28.994365199103918 23.43642847346043 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 52.0 1 110.0 2 168.0 3 330.0 4 492.0 5 492.0 6 775.5 7 1059.0 8 1180.0 9 1301.0 10 1938.0 11 2575.0 12 2575.0 13 4736.5 14 6898.0 15 10433.5 16 13969.0 17 12983.5 18 11998.0 19 11998.0 20 12908.0 21 13818.0 22 11511.0 23 9204.0 24 10672.0 25 12140.0 26 12140.0 27 13516.0 28 14892.0 29 16404.5 30 17917.0 31 19450.0 32 20983.0 33 20983.0 34 23410.5 35 25838.0 36 27999.0 37 30160.0 38 32347.5 39 34535.0 40 34535.0 41 35704.0 42 36873.0 43 39012.5 44 41152.0 45 43173.5 46 45195.0 47 45195.0 48 55393.5 49 65592.0 50 63376.0 51 61160.0 52 57482.0 53 53804.0 54 53804.0 55 49274.0 56 44744.0 57 39296.5 58 33849.0 59 30399.0 60 26949.0 61 26949.0 62 24081.5 63 21214.0 64 18617.0 65 16020.0 66 13764.0 67 11508.0 68 11508.0 69 10004.5 70 8501.0 71 7166.5 72 5832.0 73 4831.5 74 3831.0 75 3831.0 76 3137.5 77 2444.0 78 1966.5 79 1489.0 80 1167.0 81 845.0 82 845.0 83 641.0 84 437.0 85 336.5 86 236.0 87 178.0 88 120.0 89 120.0 90 98.5 91 77.0 92 58.5 93 40.0 94 28.5 95 17.0 96 17.0 97 11.0 98 5.0 99 4.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 699936.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.130700971108475 #Duplication Level Percentage of deduplicated Percentage of total 1 85.85599638425354 54.201492343108804 2 8.051634954166351 10.166107172400014 3 2.3162148387982646 4.386727991190525 4 1.0680946166788818 2.6971824741762087 5 0.6205754118029808 1.9588680376278242 6 0.4238080423647289 1.6053179275007146 7 0.2752343758516243 1.2163017355201002 8 0.21076410853597813 1.0644548729141672 9 0.16299209395720415 0.9260824629840365 >10 0.9159264634240499 10.586480562120117 >50 0.06319664123888254 2.7342643486543015 >100 0.030578849078138723 3.4884202667649333 >500 0.002718119917879913 1.0488855362064144 >1k 0.001812079945253275 2.146676164898527 >5k 4.5301998631331876E-4 1.7727381039333225 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6734 0.9620879623279843 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5663 0.8090739724774837 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4781 0.6830624514241301 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2624 0.3748914186439903 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1488 0.2125908654505555 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1443 0.2061617062131395 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1283 0.18330247336899372 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1233 0.17615896310519819 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1134 0.16201481278288302 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1026 0.1465848306130846 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 783 0.11186737073103828 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 776 0.11086727929410689 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 1.4287020527591095E-4 0.0 14 0.0 0.0 0.0 1.4287020527591095E-4 0.0 15 0.0 0.0 0.0 2.857404105518219E-4 0.0 16 0.0 0.0 0.0 8.572212316554657E-4 0.0 17 0.0 0.0 0.0 0.0015715722580350202 0.0 18 0.0 0.0 0.0 0.002143053079138664 0.0 19 0.0 0.0 0.0 0.0032860147213459516 0.0 20 0.0 0.0 0.0 0.005429067800484615 0.0 21 1.4287020527591095E-4 0.0 0.0 0.008857952727106478 2.857404105518219E-4 22 1.4287020527591095E-4 0.0 0.0 0.014287020527591093 2.857404105518219E-4 23 1.4287020527591095E-4 0.0 0.0 0.017144424633109313 2.857404105518219E-4 24 1.4287020527591095E-4 0.0 0.0 0.02300210304942166 2.857404105518219E-4 25 1.4287020527591095E-4 0.0 0.0 0.02700246879714717 2.857404105518219E-4 26 1.4287020527591095E-4 0.0 0.0 0.033717368445114984 2.857404105518219E-4 27 1.4287020527591095E-4 0.0 0.0 0.07643555982261235 2.857404105518219E-4 28 1.4287020527591095E-4 0.0 0.0 0.16001462990902024 2.857404105518219E-4 29 1.4287020527591095E-4 0.0 0.0 0.2674530242765053 2.857404105518219E-4 30 1.4287020527591095E-4 0.0 0.0 0.39789352169341197 2.857404105518219E-4 31 1.4287020527591095E-4 0.0 0.0 0.5717665615141956 2.857404105518219E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTAAC 25 0.005494893 29.6 25 TGTTACG 50 2.7006396E-4 22.2 16 CGTGCGG 60 3.7236074E-5 21.583332 10 ACGAATG 45 0.0038243365 20.555555 18 GGTATCA 2290 0.0 20.034935 1 TCTAGAC 70 1.2183329E-4 18.5 3 CTGGTCG 60 9.2318986E-4 18.5 9 ACTAGGT 50 0.0070322007 18.5 3 GTCAATC 50 0.0070322007 18.5 16 ACCGTGT 50 0.0070322007 18.5 8 ATTGCGT 50 0.0070322007 18.5 6 ATACCGT 70 1.2183329E-4 18.5 6 TAGTACT 120 5.162292E-9 18.5 4 TTAACGG 75 2.0658108E-4 17.266666 35 TAGGAGC 75 2.0658108E-4 17.266666 6 CCGTTTA 110 7.79688E-7 16.818182 27 TACCCTC 90 4.441962E-5 16.444445 5 GTATTAG 160 6.2755134E-10 16.1875 1 TTATACC 80 3.3802004E-4 16.1875 4 ATTAGAG 115 1.2404198E-6 16.086956 3 >>END_MODULE