##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088432_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3136186 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.413171285121482 31.0 31.0 34.0 30.0 34.0 2 31.59818231444181 31.0 31.0 34.0 30.0 34.0 3 31.714778396434394 31.0 31.0 34.0 30.0 34.0 4 35.40700934192041 37.0 35.0 37.0 33.0 37.0 5 35.28965915924629 37.0 35.0 37.0 33.0 37.0 6 35.34334188087059 37.0 35.0 37.0 33.0 37.0 7 35.18077849974459 37.0 35.0 37.0 32.0 37.0 8 35.22139343776166 37.0 35.0 37.0 32.0 37.0 9 36.76033054161966 39.0 37.0 39.0 32.0 39.0 10 36.62048233108623 39.0 35.0 39.0 32.0 39.0 11 36.645292084079195 39.0 35.0 39.0 32.0 39.0 12 36.49853420683595 38.0 35.0 39.0 32.0 39.0 13 36.51528002484547 38.0 35.0 39.0 32.0 39.0 14 37.475255613028054 39.0 36.0 41.0 32.0 41.0 15 37.50066800884896 39.0 36.0 41.0 32.0 41.0 16 37.36625665697124 39.0 36.0 41.0 32.0 41.0 17 37.43517540094879 39.0 36.0 41.0 32.0 41.0 18 37.310959554057064 39.0 36.0 41.0 32.0 41.0 19 37.39412267002021 39.0 36.0 41.0 32.0 41.0 20 37.29296444789946 39.0 36.0 41.0 31.0 41.0 21 37.13858967548481 39.0 36.0 40.0 31.0 41.0 22 37.04028778905333 39.0 36.0 40.0 31.0 41.0 23 36.84410490959401 39.0 36.0 40.0 30.0 41.0 24 37.04528653593888 39.0 36.0 40.0 31.0 41.0 25 37.01151302888285 39.0 36.0 41.0 31.0 41.0 26 36.83037740746244 39.0 36.0 40.0 30.0 41.0 27 36.76858419749339 39.0 35.0 40.0 30.0 41.0 28 36.58086797147873 39.0 35.0 40.0 30.0 41.0 29 36.39961692323096 39.0 35.0 40.0 30.0 41.0 30 36.22720910048065 38.0 35.0 40.0 30.0 41.0 31 35.9341126451046 38.0 35.0 40.0 29.0 41.0 32 35.79205538191931 38.0 34.0 40.0 28.0 41.0 33 35.58129014031693 38.0 34.0 40.0 27.0 41.0 34 35.45605394578 38.0 34.0 40.0 27.0 41.0 35 35.210209470994386 38.0 34.0 40.0 26.0 41.0 36 35.04806475126156 38.0 34.0 40.0 25.0 41.0 37 34.88569970020911 38.0 33.0 40.0 25.0 41.0 38 34.80245463757571 38.0 33.0 40.0 24.0 41.0 39 34.69641883485227 38.0 33.0 40.0 24.0 41.0 40 34.56572091068578 38.0 33.0 40.0 23.0 41.0 41 34.34625784312538 38.0 33.0 40.0 22.0 41.0 42 34.105399042021105 38.0 33.0 40.0 21.0 41.0 43 33.76332717511015 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 6.0 13 7.0 14 10.0 15 20.0 16 51.0 17 116.0 18 283.0 19 703.0 20 1448.0 21 2963.0 22 5644.0 23 9367.0 24 14942.0 25 22640.0 26 32334.0 27 45325.0 28 59394.0 29 77862.0 30 96855.0 31 118566.0 32 144048.0 33 175098.0 34 212907.0 35 256684.0 36 324397.0 37 431235.0 38 549752.0 39 553527.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.47579257097634 21.46240688530591 13.793888500235637 23.267912043482113 2 19.131805320220167 23.616647737092126 34.88501638614546 22.366530556542248 3 19.62396362970819 25.024440514688862 32.50279160738553 22.848804248217423 4 13.816591235341273 16.598154573740207 36.380272088453935 33.204982102464584 5 12.443809136320358 38.86513746314792 34.98810338417428 13.702950016357448 6 32.24709886467193 37.72831075707882 13.612681135621422 16.41190924262783 7 26.119145994529664 32.991825102210136 21.564537307417353 19.32449159584285 8 27.22041996233642 34.41827111019563 18.805963676899264 19.555345250568685 9 24.635528632549217 14.48440876912275 21.717334367285616 39.16272823104242 10 16.629051975871327 27.646542647661843 33.21601461137828 22.508390765088553 11 33.23189377160666 22.6950824982957 23.35457782159604 20.7184459085016 12 21.220584493394206 27.46960798881189 30.679207164370993 20.630600353422913 13 31.37836850237837 21.107007046138207 26.054959750473984 21.459664701009444 14 20.61701697539623 23.034348090323725 27.651580614160004 28.697054320120042 15 22.842490847162765 29.62499673169895 25.42601108480173 22.106501336336557 16 21.95405502097133 28.376314415025128 26.406628943563938 23.263001620439606 17 21.86212807531186 26.809985122055895 27.052094486742817 24.275792315889426 18 22.92440563155374 25.714865125984236 29.348386862258806 22.012342380203215 19 22.916912453534323 24.960828216183607 30.372911555628395 21.74934777465367 20 23.646811764353263 24.741007070371467 30.21762739837497 21.394553766900305 21 22.55972700598753 25.601383336319977 30.63440752557406 21.20448213211844 22 21.51827091888045 26.025784184994126 30.168108651719 22.28783624440642 23 22.386363563895763 26.13872391497188 31.013817420267802 20.461095100864554 24 22.357825715694158 26.326722968599437 28.569574636198237 22.745876679508168 25 22.22425583176508 26.300704103646915 29.830054722519645 21.64498534206836 26 22.02404449225907 27.0091442280528 29.76267989207273 21.2041313876154 27 21.102479253462644 27.01893318827391 29.4067061073546 22.471881450908842 28 21.500925008912102 26.697938196267696 29.634626262600495 22.166510532219707 29 21.91601518532383 26.643604684160955 29.036670656651104 22.403709473864115 30 21.735381766260037 26.75386600157006 30.544872019708013 20.965880212461887 31 22.245141072627707 26.527125623288928 30.41130213577894 20.81643116830443 32 21.742237227001205 26.38309717599658 29.524683803830516 22.349981793171704 33 21.475830834013035 26.42914036348609 30.154907904059264 21.94012089844161 34 20.950383682600457 26.892282536813823 30.52220117046629 21.635132610119427 35 20.618802583775324 28.74966599557552 29.382823595284208 21.24870782536495 36 22.640398241685922 26.55445180866186 29.35951502876424 21.445634920887983 37 21.572859517898493 27.108404922412127 29.329319115639187 21.989416444050196 38 21.42812958160007 25.80363537111638 30.608293003029797 22.159942044253754 39 20.884156743254387 25.798278545979098 31.325246653100297 21.99231805766622 40 20.02805318307014 26.448463197017013 30.932636010746812 22.590847609166037 41 21.227057323768424 25.286765517096242 31.064292742841143 22.421884416294187 42 19.929780950492095 27.14469103554445 30.5204155620872 22.40511245187626 43 20.389096820150336 26.676351466398994 29.930941595938503 23.003610117512164 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 204.0 1 405.0 2 606.0 3 1446.0 4 2286.0 5 2286.0 6 3653.5 7 5021.0 8 5606.5 9 6192.0 10 9477.5 11 12763.0 12 12763.0 13 24313.0 14 35863.0 15 57274.5 16 78686.0 17 71552.0 18 64418.0 19 64418.0 20 68040.5 21 71663.0 22 57438.5 23 43214.0 24 48386.5 25 53559.0 26 53559.0 27 59231.0 28 64903.0 29 71669.0 30 78435.0 31 86793.5 32 95152.0 33 95152.0 34 106300.5 35 117449.0 36 128081.0 37 138713.0 38 148323.5 39 157934.0 40 157934.0 41 163945.0 42 169956.0 43 180689.0 44 191422.0 45 199667.0 46 207912.0 47 207912.0 48 261611.5 49 315311.0 50 299384.5 51 283458.0 52 261545.0 53 239632.0 54 239632.0 55 214341.0 56 189050.0 57 161791.0 58 134532.0 59 119681.0 60 104830.0 61 104830.0 62 93066.0 63 81302.0 64 71106.0 65 60910.0 66 52590.0 67 44270.0 68 44270.0 69 38233.0 70 32196.0 71 26889.0 72 21582.0 73 17882.0 74 14182.0 75 14182.0 76 11296.0 77 8410.0 78 6591.5 79 4773.0 80 3678.5 81 2584.0 82 2584.0 83 1972.0 84 1360.0 85 1037.5 86 715.0 87 523.5 88 332.0 89 332.0 90 291.5 91 251.0 92 170.0 93 89.0 94 68.5 95 48.0 96 48.0 97 29.5 98 11.0 99 9.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3136186.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.024712950290784 #Duplication Level Percentage of deduplicated Percentage of total 1 79.47263442522431 37.37177821249571 2 11.543756537443405 10.856836750826378 3 3.6778041254401144 5.188430498586499 4 1.576011036443743 2.9644586638102917 5 0.8476927109611274 1.9931253201500416 6 0.5437471727207337 1.5341732828834813 7 0.3597805105868253 1.1843002664818159 8 0.25982313212782204 0.9774486564925045 9 0.19387444887562522 0.820520127609489 >10 1.2736057578389 11.644304029640832 >50 0.13917965758014533 4.542879957898251 >100 0.09747546090089695 9.009835566243314 >500 0.009516759720405442 3.1194902990222184 >1k 0.004418495584438003 3.8628258260457633 >5k 4.0786113087120025E-4 1.3719773295202342 >10k+ 2.7190742058080016E-4 3.557615212293219 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 38787 1.236757003570579 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 31706 1.0109732012068162 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 26673 0.8504916481356654 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14128 0.45048348535450383 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 8285 0.2641743825143024 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 7660 0.24424571756904725 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 7483 0.238601919656551 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 6808 0.21707896151567538 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 6560 0.20917126726539814 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 6124 0.19526903059958817 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4302 0.13717298655118032 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4211 0.13427137293515115 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3713 0.11839221270677186 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3494 0.11140920850995445 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3357 0.10704084515395453 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3351 0.10684952997048007 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3320 0.10586106818919541 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.1885863912408256E-5 0.0 3 0.0 0.0 0.0 3.1885863912408256E-5 0.0 4 0.0 0.0 0.0 3.1885863912408256E-5 0.0 5 3.1885863912408256E-5 3.1885863912408256E-5 0.0 3.1885863912408256E-5 0.0 6 6.377172782481651E-5 3.1885863912408256E-5 0.0 3.1885863912408256E-5 0.0 7 6.377172782481651E-5 3.1885863912408256E-5 0.0 3.1885863912408256E-5 0.0 8 1.2754345564963302E-4 3.1885863912408256E-5 0.0 3.1885863912408256E-5 0.0 9 1.2754345564963302E-4 3.1885863912408256E-5 0.0 3.188586391240826E-4 0.0 10 1.2754345564963302E-4 3.1885863912408256E-5 0.0 4.464020947737156E-4 0.0 11 1.2754345564963302E-4 3.1885863912408256E-5 0.0 5.739455504233486E-4 0.0 12 1.2754345564963302E-4 3.1885863912408256E-5 0.0 7.333748699853899E-4 0.0 13 1.9131518347444953E-4 3.1885863912408256E-5 0.0 7.652607338977981E-4 0.0 14 1.9131518347444953E-4 3.1885863912408256E-5 0.0 0.0010522335091094725 0.0 15 1.9131518347444953E-4 3.1885863912408256E-5 0.0 0.0014667497399707798 0.0 16 1.9131518347444953E-4 3.1885863912408256E-5 0.0 0.0017856083790948624 0.0 17 2.232010473868578E-4 3.1885863912408256E-5 0.0 0.0025189832490802523 0.0 18 2.232010473868578E-4 3.1885863912408256E-5 0.0 0.002965385343853968 0.0 19 2.232010473868578E-4 6.377172782481651E-5 0.0 0.003921961261226216 0.0 20 2.232010473868578E-4 6.377172782481651E-5 0.0 0.006185857599007202 0.0 21 2.232010473868578E-4 6.377172782481651E-5 0.0 0.01007593299632101 0.0 22 2.5508691129926605E-4 6.377172782481651E-5 0.0 0.0173777958322625 0.0 23 2.5508691129926605E-4 6.377172782481651E-5 0.0 0.022256333010860965 0.0 24 2.5508691129926605E-4 6.377172782481651E-5 0.0 0.029558195846802453 0.0 25 2.5508691129926605E-4 6.377172782481651E-5 0.0 0.035170107895386306 0.0 26 2.5508691129926605E-4 6.377172782481651E-5 0.0 0.04473586706910879 0.0 27 2.5508691129926605E-4 6.377172782481651E-5 0.0 0.09297917916858248 0.0 28 2.5508691129926605E-4 6.377172782481651E-5 0.0 0.19750104107345673 0.0 29 2.5508691129926605E-4 6.377172782481651E-5 0.0 0.3294447459430021 0.0 30 2.869727752116743E-4 6.377172782481651E-5 0.0 0.5090897032255102 0.0 31 3.188586391240826E-4 6.377172782481651E-5 0.0 0.7386998092587621 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10805 0.0 21.590467 1 TATACCG 205 0.0 18.951221 5 GTATTGG 1395 0.0 16.842295 1 ATAAGAC 185 1.8189894E-11 16.0 3 GTATTAG 850 0.0 15.888236 1 ATTGGAC 1625 0.0 15.596923 3 TAATACT 850 0.0 15.235294 4 ATTAGAG 735 0.0 15.102041 3 GATCGGT 135 3.9782208E-7 15.074073 11 TAACGGC 615 0.0 15.040651 36 TTAACGG 630 0.0 14.97619 35 CGATTGC 75 0.0041065104 14.8 10 TTGGACC 2110 0.0 14.4668255 4 GTATCAA 16840 0.0 13.842043 2 TGGACCC 2060 0.0 13.740292 5 GTAATAC 245 7.2759576E-12 13.591836 3 AACGGCC 715 0.0 13.195806 37 GCACCGC 735 0.0 13.088436 10 TATTAGA 820 0.0 13.085366 2 AATACTG 935 0.0 13.058823 5 >>END_MODULE