##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088430_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3043633 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.413786419059065 31.0 31.0 34.0 30.0 34.0 2 31.597541819266645 31.0 31.0 34.0 30.0 34.0 3 31.712708463865386 31.0 31.0 34.0 30.0 34.0 4 35.395989923883725 37.0 35.0 37.0 33.0 37.0 5 35.291226964617614 37.0 35.0 37.0 33.0 37.0 6 35.35251293437809 37.0 35.0 37.0 33.0 37.0 7 35.18253021964212 37.0 35.0 37.0 32.0 37.0 8 35.234715223550275 37.0 35.0 37.0 32.0 37.0 9 36.76714045353037 39.0 37.0 39.0 32.0 39.0 10 36.63315058024407 39.0 35.0 39.0 32.0 39.0 11 36.66291041002644 39.0 35.0 39.0 32.0 39.0 12 36.517796988007426 38.0 35.0 39.0 32.0 39.0 13 36.53294040378719 38.0 35.0 39.0 32.0 39.0 14 37.48930537945935 39.0 36.0 41.0 32.0 41.0 15 37.51661090545411 39.0 36.0 41.0 32.0 41.0 16 37.38246628289284 39.0 36.0 41.0 32.0 41.0 17 37.46372936553126 39.0 36.0 41.0 32.0 41.0 18 37.340736218854246 39.0 36.0 41.0 32.0 41.0 19 37.424525887319525 39.0 36.0 41.0 32.0 41.0 20 37.33297214217352 39.0 36.0 41.0 31.0 41.0 21 37.18065121517608 39.0 36.0 40.0 31.0 41.0 22 37.096590489063566 39.0 36.0 40.0 31.0 41.0 23 36.89251365062739 39.0 36.0 40.0 30.0 41.0 24 37.09027862426252 39.0 36.0 41.0 31.0 41.0 25 37.064660555329766 39.0 36.0 41.0 31.0 41.0 26 36.88671597396927 39.0 36.0 40.0 30.0 41.0 27 36.834397248288475 39.0 35.0 40.0 30.0 41.0 28 36.64554070743746 39.0 35.0 40.0 30.0 41.0 29 36.47906728570757 39.0 35.0 40.0 30.0 41.0 30 36.30446936276483 38.0 35.0 40.0 30.0 41.0 31 36.01293487092563 38.0 35.0 40.0 29.0 41.0 32 35.872527995326635 38.0 35.0 40.0 29.0 41.0 33 35.662420206378364 38.0 34.0 40.0 27.0 41.0 34 35.54359181938164 38.0 34.0 40.0 27.0 41.0 35 35.28796770175642 38.0 34.0 40.0 26.0 41.0 36 35.13633838245281 38.0 34.0 40.0 25.0 41.0 37 34.98387650547881 38.0 33.0 40.0 25.0 41.0 38 34.897050662809875 38.0 33.0 40.0 24.0 41.0 39 34.7962566446086 38.0 33.0 40.0 24.0 41.0 40 34.659389617605015 38.0 33.0 40.0 24.0 41.0 41 34.440556072299124 38.0 33.0 40.0 23.0 41.0 42 34.19344743600822 38.0 33.0 40.0 21.0 41.0 43 33.85679745225525 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 0.0 13 1.0 14 8.0 15 22.0 16 39.0 17 107.0 18 254.0 19 589.0 20 1322.0 21 2845.0 22 4987.0 23 8792.0 24 14033.0 25 21211.0 26 30043.0 27 42305.0 28 57093.0 29 73892.0 30 92749.0 31 112689.0 32 137866.0 33 168567.0 34 205277.0 35 248164.0 36 315300.0 37 423356.0 38 538557.0 39 543563.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.40581338157393 21.605692933412143 13.90213603282656 23.08635765218737 2 18.80476391207481 23.828267074249755 35.25556464922019 22.111404364455243 3 19.62624928826833 25.1733372584671 32.81906852764443 22.38134492562014 4 13.668829323377688 16.457766097292282 36.612955635584186 33.26044894374584 5 12.268759078377716 38.88691573524141 35.14336321100474 13.700961975376138 6 32.099829381531876 37.50330608190935 13.495122440846185 16.901742095712592 7 25.99360698218215 33.07501265757074 21.541526195832414 19.389854164414697 8 27.134776104740617 34.44709004009353 18.91762245973808 19.500511395427765 9 24.38835431210005 14.553134362782899 21.910000318698085 39.14851100641897 10 16.378288709578325 27.60819060642331 33.5896936325766 22.42382705142177 11 32.82268262960745 22.53487854810353 23.83260399660537 20.809834825683648 12 21.137798151091147 27.287422629469454 31.0673790171154 20.507400202324 13 31.589156774157722 20.969906687172863 26.510160719114296 20.930775819555116 14 20.457722728068724 23.05425785566131 27.879511097428633 28.60850831884133 15 22.47396450229052 29.626830830129652 25.806166512191187 22.09303815538864 16 21.70761060876919 28.539643248709684 26.720928574502906 23.03181756801822 17 21.672225265004027 26.80369150945597 26.988897807324342 24.535185418215665 18 23.04147707690119 25.59513581302345 29.60820177728392 21.755185332791438 19 22.634693473227554 24.671009941080282 30.82881543208396 21.865481153608204 20 23.636621103792738 24.407114786835336 30.7588989868358 21.197365122536127 21 22.40135390830629 25.376449788788598 31.3237174127104 20.89847889019471 22 21.134972580465515 25.74436536862362 30.791885881116414 22.328776169794455 23 22.244863293307702 25.96663263934909 31.723239956985616 20.06526411035759 24 22.16032616284552 25.96341280305477 29.08760681724768 22.78865421685203 25 22.05292162359917 26.229279285643177 30.22729744354855 21.490501647209108 26 21.842383756517293 26.869599587072422 30.31985130927415 20.968165347136136 27 20.748559369674332 27.006836895249855 29.888196113000483 22.356407622075327 28 21.314757725389363 26.473953988539357 30.047709431459047 22.163578854612233 29 21.678730648537456 26.401244828137955 29.443957270801047 22.476067252523546 30 21.547144481611287 26.59328506426366 31.14895915506239 20.710611299062666 31 22.27758734380919 26.383929994187866 30.836897878292156 20.501584783710783 32 21.90802899035462 26.119640574274232 29.809014424538045 22.163316010833107 33 21.490370225319545 26.312929318350797 30.427978668913102 21.76872178741655 34 20.83891191874973 27.056678646867084 30.850631465751622 21.253777968631564 35 20.394673076550294 29.2076278578922 29.538285332035763 20.859413733521748 36 22.643695872662704 26.64470387855566 29.623381005528593 21.088219243253047 37 21.571227542873928 27.303423244523895 29.54679489938504 21.578554313217133 38 21.43573157473322 25.824664143147352 30.860258119162197 21.879346162957226 39 20.956567365382096 25.739995590795605 31.59089811419445 21.71253892962785 40 19.85567905197506 26.542194804695573 31.077399936194674 22.524726207134695 41 21.543596090593052 25.254227431493874 31.060577934330453 22.141598543582617 42 19.98831659401774 27.388518918016725 30.55378227269845 22.069382215267083 43 20.50487033094989 27.162177568714757 29.693593150028274 22.639358950307084 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 196.0 1 381.0 2 566.0 3 1371.5 4 2177.0 5 2177.0 6 3503.5 7 4830.0 8 5452.0 9 6074.0 10 9266.5 11 12459.0 12 12459.0 13 23630.5 14 34802.0 15 55742.0 16 76682.0 17 70712.5 18 64743.0 19 64743.0 20 69429.0 21 74115.0 22 59116.0 23 44117.0 24 49496.0 25 54875.0 26 54875.0 27 60357.5 28 65840.0 29 72066.0 30 78292.0 31 86041.0 32 93790.0 33 93790.0 34 104142.0 35 114494.0 36 124864.5 37 135235.0 38 142427.5 39 149620.0 40 149620.0 41 154620.0 42 159620.0 43 169647.0 44 179674.0 45 189986.0 46 200298.0 47 200298.0 48 261586.5 49 322875.0 50 303353.0 51 283831.0 52 260554.5 53 237278.0 54 237278.0 55 209370.0 56 181462.0 57 152347.0 58 123232.0 59 109097.0 60 94962.0 61 94962.0 62 84576.5 63 74191.0 64 64905.0 65 55619.0 66 47691.0 67 39763.0 68 39763.0 69 34193.5 70 28624.0 71 24187.0 72 19750.0 73 16222.0 74 12694.0 75 12694.0 76 10204.0 77 7714.0 78 5984.0 79 4254.0 80 3313.0 81 2372.0 82 2372.0 83 1805.5 84 1239.0 85 952.5 86 666.0 87 517.5 88 369.0 89 369.0 90 262.0 91 155.0 92 105.0 93 55.0 94 39.0 95 23.0 96 23.0 97 13.5 98 4.0 99 3.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3043633.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.031937229692566 #Duplication Level Percentage of deduplicated Percentage of total 1 78.76247458387653 36.2558928610026 2 11.849482843985868 10.909093009573528 3 3.778000598412036 5.217260591995313 4 1.7013284395524928 3.132617757462846 5 0.8892695793910403 2.046740072940174 6 0.5492826468684254 1.5170726593204045 7 0.36721704868648253 1.1832598494366384 8 0.27112395994571775 0.9984288884549568 9 0.21794836836720294 0.90293270507937 >10 1.361450755085849 12.091126062364323 >50 0.14524963101638108 4.612593996627122 >100 0.09308306769918061 8.428046679277742 >500 0.008625598232308688 2.7409230096338772 >1k 0.0046721990424858076 4.333403314926381 >5k 4.3127991161407455E-4 1.532459127343646 >10k+ 3.593999263450621E-4 4.0981494145612 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 38065 1.2506435565654597 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 33346 1.0955985823520773 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 27212 0.8940631147053537 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14080 0.46260505126603635 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 11154 0.3664699390498132 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 9444 0.3102870812611113 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 8675 0.285021222992391 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 8202 0.2694805845514226 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 7596 0.24957016828244405 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 6987 0.22956118559629232 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5411 0.17778096110799166 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4231 0.13901150368654827 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4221 0.13868294896263775 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 4177 0.13723730817743138 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 4159 0.1366459096743924 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3875 0.12731495551533317 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3656 0.12011960706169239 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 3559 0.11693262623976017 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3530 0.11597981754041962 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3369 0.11069008648545997 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3305 0.10858733625243254 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3203 0.10523607806854506 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 3090 0.10152340968835598 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 3.285547239105372E-5 0.0 0.0 0.0 0.0 4 3.285547239105372E-5 0.0 0.0 0.0 0.0 5 6.571094478210744E-5 0.0 0.0 0.0 0.0 6 1.3142188956421488E-4 0.0 0.0 0.0 0.0 7 1.3142188956421488E-4 0.0 0.0 0.0 0.0 8 1.642773619552686E-4 0.0 0.0 0.0 0.0 9 1.642773619552686E-4 0.0 0.0 1.642773619552686E-4 0.0 10 2.29988306737376E-4 0.0 0.0 2.29988306737376E-4 0.0 11 2.6284377912842976E-4 0.0 0.0 4.928320858658058E-4 0.0 12 2.6284377912842976E-4 0.0 0.0 6.242539754300207E-4 0.0 13 2.956992515194835E-4 0.0 0.0 6.242539754300207E-4 0.0 14 3.285547239105372E-4 0.0 3.285547239105372E-5 9.19953226949504E-4 0.0 15 3.285547239105372E-4 0.0 3.285547239105372E-5 0.001182797006077934 0.0 16 3.285547239105372E-4 0.0 3.285547239105372E-5 0.0018070509815079545 0.0 17 3.285547239105372E-4 0.0 3.285547239105372E-5 0.002661293263675351 0.0 18 3.614101963015909E-4 0.0 3.285547239105372E-5 0.0034169691286695864 0.0 19 3.614101963015909E-4 0.0 3.285547239105372E-5 0.004566910662356467 0.0 20 3.9426566869264464E-4 0.0 3.285547239105372E-5 0.007721036011897624 0.0 21 4.271211410836983E-4 0.0 3.285547239105372E-5 0.013175044428812541 0.0 22 4.59976613474752E-4 0.0 3.285547239105372E-5 0.021717467250486507 0.0 23 4.928320858658058E-4 0.0 3.285547239105372E-5 0.02733575302935669 0.0 24 4.928320858658058E-4 0.0 3.285547239105372E-5 0.03558247659951118 0.0 25 4.928320858658058E-4 0.0 6.571094478210744E-5 0.04198929371576665 0.0 26 4.928320858658058E-4 0.0 6.571094478210744E-5 0.051385958819608016 0.0 27 4.928320858658058E-4 0.0 6.571094478210744E-5 0.0985335617007701 0.0 28 4.928320858658058E-4 0.0 6.571094478210744E-5 0.19893988532783027 0.0 29 4.928320858658058E-4 0.0 6.571094478210744E-5 0.32674767292902923 0.0 30 4.928320858658058E-4 0.0 6.571094478210744E-5 0.4971361527490338 0.0 31 4.928320858658058E-4 0.0 6.571094478210744E-5 0.6900306311569102 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10885 0.0 22.672485 1 TAGGTCG 130 6.9849193E-10 18.5 21 ATTAGAG 590 0.0 16.618645 3 GTATTAG 735 0.0 16.108843 1 GCCTAAT 165 9.767973E-10 15.69697 1 GTATTGG 1420 0.0 15.3732395 1 TACTCCG 655 0.0 15.251908 5 AGCGTAT 85 5.367759E-4 15.235294 7 CGAATTA 135 3.9781116E-7 15.074073 15 TTAACGG 500 0.0 14.800001 35 ACGTTTA 165 1.6481863E-8 14.575757 26 CCGGTCT 625 0.0 14.504 9 TAATACT 935 0.0 14.44385 4 CTAATAC 860 0.0 14.41279 3 GTATCAA 17140 0.0 14.38769 2 GTCGGGT 245 0.0 14.346938 24 ACCGTTA 375 0.0 14.306666 8 TCCGGTC 665 0.0 14.18797 8 TAACGGC 510 0.0 14.1470585 36 TACTGGT 825 0.0 14.127274 7 >>END_MODULE