##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088426_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3385430 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26473771426377 31.0 31.0 34.0 30.0 34.0 2 31.488702764493727 31.0 31.0 34.0 30.0 34.0 3 31.613311455265652 31.0 31.0 34.0 30.0 34.0 4 35.3199815089959 37.0 35.0 37.0 33.0 37.0 5 35.17206706385895 37.0 35.0 37.0 32.0 37.0 6 35.21514490035239 37.0 35.0 37.0 32.0 37.0 7 35.07772661079981 37.0 35.0 37.0 32.0 37.0 8 35.10034796170649 37.0 35.0 37.0 32.0 37.0 9 36.64624641478335 39.0 35.0 39.0 32.0 39.0 10 36.465463176021956 38.0 35.0 39.0 32.0 39.0 11 36.538305621442476 38.0 35.0 39.0 32.0 39.0 12 36.37613035862505 38.0 35.0 39.0 32.0 39.0 13 36.361889627019316 38.0 35.0 39.0 32.0 39.0 14 37.363006767234886 39.0 36.0 41.0 32.0 41.0 15 37.40085543047707 39.0 36.0 41.0 32.0 41.0 16 37.242637124383016 39.0 36.0 41.0 31.0 41.0 17 37.3170542589863 39.0 36.0 41.0 32.0 41.0 18 37.179352696703226 39.0 36.0 40.0 31.0 41.0 19 37.280412532529105 39.0 36.0 40.0 31.0 41.0 20 37.19919035395799 39.0 36.0 40.0 31.0 41.0 21 37.03408843189787 39.0 36.0 40.0 31.0 41.0 22 36.93785634321194 39.0 36.0 40.0 31.0 41.0 23 36.785778172935196 39.0 35.0 40.0 30.0 41.0 24 36.961818144223926 39.0 36.0 40.0 31.0 41.0 25 36.95048900730483 39.0 36.0 40.0 31.0 41.0 26 36.77876872361857 39.0 36.0 40.0 30.0 41.0 27 36.72798196979409 39.0 35.0 40.0 30.0 41.0 28 36.59208017888422 39.0 35.0 40.0 30.0 41.0 29 36.43421160679736 39.0 35.0 40.0 30.0 41.0 30 36.32646517576792 38.0 35.0 40.0 30.0 41.0 31 36.162342745234724 38.0 35.0 40.0 29.0 41.0 32 36.01981077736063 38.0 35.0 40.0 29.0 41.0 33 35.8827203634398 38.0 35.0 40.0 29.0 41.0 34 35.774672936672744 38.0 34.0 40.0 28.0 41.0 35 35.55853702483879 38.0 34.0 40.0 27.0 41.0 36 35.477523977751716 38.0 34.0 40.0 27.0 41.0 37 35.30388222471001 38.0 34.0 40.0 26.0 41.0 38 35.33831064296116 38.0 34.0 40.0 26.0 41.0 39 35.2682436204559 38.0 34.0 40.0 25.0 41.0 40 35.212495015404244 38.0 34.0 40.0 25.0 41.0 41 35.04966252440606 38.0 34.0 40.0 25.0 41.0 42 34.914630637762414 38.0 33.0 40.0 24.0 41.0 43 34.6466832869089 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 1.0 14 6.0 15 18.0 16 56.0 17 108.0 18 248.0 19 581.0 20 1336.0 21 2678.0 22 4865.0 23 8530.0 24 13946.0 25 21578.0 26 31487.0 27 44086.0 28 60928.0 29 80202.0 30 103109.0 31 127668.0 32 156185.0 33 189761.0 34 230520.0 35 280828.0 36 351037.0 37 457880.0 38 616200.0 39 601586.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.635437743506735 23.22582360291012 13.990394130140041 23.148344523443107 2 17.32403269304047 23.934596196051906 36.71545416682667 22.025916944080958 3 18.564259193071486 27.766753410940414 32.420992311168746 21.247995084819358 4 12.989605456323124 17.814900913621017 39.19605485861471 29.999438771441145 5 12.454429717938343 39.36141051506012 35.43112691740784 12.753032849593701 6 30.010840572689435 39.38353473561704 16.088857250039137 14.516767441654382 7 24.846740295915144 33.52667164880089 24.47804267109348 17.148545384190488 8 25.64938575011151 37.090207152414905 20.62517907621779 16.635228021255795 9 24.7448920816558 14.469594704365472 22.758910980289063 38.026602233689665 10 15.197242300091865 28.116841878284294 36.481835394617526 20.204080427006318 11 33.08460077449541 23.473709395852225 24.128958507486495 19.31273132216587 12 19.555772826494714 27.58562427815669 31.82233866894309 21.036264226405507 13 29.098785087861806 22.748572559468073 27.555613319430616 20.5970290332395 14 20.424790942361824 22.691829398333446 29.582593643938882 27.300786015365848 15 22.821177811976618 29.72322570544953 26.732320561937478 20.723275920636375 16 20.269507861630576 29.621347952844985 28.04246432506358 22.06667986046086 17 20.49760296328679 28.394620476571664 28.337670547020615 22.770106013120934 18 21.20705493836824 27.851498923327316 29.817659795062962 21.12378634324148 19 22.495547094460676 27.56107791329314 30.37608221112237 19.567292781123815 20 21.570612891124615 27.774285688967133 30.006350744218608 20.648750675689648 21 21.82727157259196 26.376590270659854 31.448412757020527 20.347725399727658 22 21.034167003896105 26.944110497041734 29.954865408530086 22.066857090532075 23 21.53566902874967 27.822196884886115 30.990125331198698 19.652008755165518 24 21.37190844294521 28.619436821910366 29.349713330359805 20.65894140478462 25 20.61543142230086 27.601397754495 30.722685153732314 21.060485669471827 26 20.529474837760638 26.700921300986874 31.031951628005892 21.73765223324659 27 20.986551191429154 27.25665572763283 30.502329098519244 21.254463982418777 28 21.283322945681938 27.5177746992258 29.799139252620787 21.39976310247147 29 20.870908569960093 28.643097036417824 29.88485953039939 20.601134863222693 30 20.364946254980904 28.60056181932576 29.17372386964138 21.860768056051963 31 21.822752205775927 27.773813075443886 30.197345684300075 20.206089034480108 32 19.62619224145825 27.608280188927253 30.69347173032672 22.07205583928777 33 19.89324842043699 28.057144882629387 31.905134650546607 20.14447204638702 34 20.505164779658713 27.92283402699214 31.426140844737592 20.14586034861155 35 20.334698989493212 28.59985289904089 30.126719500920117 20.93872861054578 36 21.943150500822643 28.472660784597526 29.63168637366597 19.95250234091386 37 19.615558437185232 28.95065028666964 30.27591768253959 21.15787359360554 38 20.96599250316799 28.599262132136833 30.296417294110352 20.13832807058483 39 20.72061746956812 27.1737711309937 31.150193623852807 20.955417775585374 40 20.297185291085622 27.871791766481657 31.33598981517857 20.495033127254146 41 21.362544787515915 26.833164472459924 30.317773517691993 21.48651722233217 42 19.47802790192088 28.347802199425182 30.63607872559763 21.538091173056305 43 19.864537148899846 27.067521703299136 30.129053030191145 22.938888117609878 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 301.0 1 710.5 2 1120.0 3 2272.5 4 3425.0 5 3425.0 6 5364.5 7 7304.0 8 8362.5 9 9421.0 10 13944.0 11 18467.0 12 18467.0 13 31116.5 14 43766.0 15 57633.0 16 71500.0 17 69430.0 18 67360.0 19 67360.0 20 74280.0 21 81200.0 22 72069.0 23 62938.0 24 69169.5 25 75401.0 26 75401.0 27 83176.5 28 90952.0 29 98238.5 30 105525.0 31 115288.0 32 125051.0 33 125051.0 34 135168.5 35 145286.0 36 165930.0 37 186574.0 38 209853.0 39 233132.0 40 233132.0 41 237394.0 42 241656.0 43 256893.5 44 272131.0 45 257215.0 46 242299.0 47 242299.0 48 256326.5 49 270354.0 50 249272.0 51 228190.0 52 215889.5 53 203589.0 54 203589.0 55 188429.0 56 173269.0 57 150978.5 58 128688.0 59 111403.5 60 94119.0 61 94119.0 62 80523.0 63 66927.0 64 56557.0 65 46187.0 66 38921.5 67 31656.0 68 31656.0 69 26826.5 70 21997.0 71 18331.0 72 14665.0 73 11854.0 74 9043.0 75 9043.0 76 7252.0 77 5461.0 78 4277.5 79 3094.0 80 2354.5 81 1615.0 82 1615.0 83 1223.5 84 832.0 85 641.5 86 451.0 87 328.5 88 206.0 89 206.0 90 192.5 91 179.0 92 119.5 93 60.0 94 46.0 95 32.0 96 32.0 97 19.0 98 6.0 99 3.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3385430.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.24301596974043 #Duplication Level Percentage of deduplicated Percentage of total 1 80.3397492868383 41.16851055710398 2 11.452682307735532 11.737399647833112 3 3.508635700092122 5.39379225635466 4 1.489008007316982 3.0520504439206193 5 0.7766305423439681 1.9898445641960065 6 0.4927915209343939 1.515127426619629 7 0.31551612334025336 1.1317598422924637 8 0.24312121353821736 0.9966611382337237 9 0.17204164516484585 0.7934339493578352 >10 1.0598349929540796 10.063007744505546 >50 0.08227896073839475 2.9198636986702 >100 0.05550547009812389 5.695393740033547 >500 0.005610474899910834 2.011327665762452 >1k 0.005726154793753574 6.101796876322656 >5k 4.0487963188156587E-4 1.396023406267388 >10k+ 4.627195792932181E-4 4.034007042526121 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 25662 0.7580130145948963 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 24773 0.7317534257095849 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 19302 0.570149139104929 No Hit ACTTAGAGCTGCATTCCCAAACAACTCGACTCTTCGAAGGCAC 17210 0.5083549209406191 No Hit GCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGC 13969 0.4126211441382631 No Hit CTGTACTTGTTCGCTATCGGTCTCTCGCCAATATTTAGCTTTA 12468 0.36828408798882273 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12274 0.3625536490194746 No Hit TCACTGTACTTGTTCGCTATCGGTCTCTCGCCAATATTTAGCT 10447 0.3085870923339133 No Hit CGCCAATATTTAGCTTTAGATGGAATTTACCACCCACTTAGAG 7909 0.23361877220914332 No Hit TTCCATCACTGTACTTGTTCGCTATCGGTCTCTCGCCAATATT 7738 0.22856771517946023 No Hit GTACTTGTTCGCTATCGGTCTCTCGCCAATATTTAGCTTTAGA 7630 0.22537757389755514 No Hit ATATTTAGCTTTAGATGGAATTTACCACCCACTTAGAGCTGCA 6861 0.20266258643658266 No Hit CTATCGGTCTCTCGCCAATATTTAGCTTTAGATGGAATTTACC 6491 0.19173339871153738 No Hit GAATTTACCACCCACTTAGAGCTGCATTCCCAAACAACTCGAC 5298 0.1564941528845671 No Hit TTCCCAAACAACTCGACTCTTCGAAGGCACTTTACAAAGAACC 5174 0.1528313980794168 No Hit GGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAG 4915 0.1451809666718851 No Hit GTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAA 4876 0.14402897120897493 No Hit GTCATAGAGGGTGAGAATCCCGTGTGGCGAGGAGTGCGGTTCT 4146 0.12246597921091265 No Hit CTTTGGGGCCGTTCCTTGTCTATGTTCCTTGGAACAGGACGTC 4073 0.12030968001110642 No Hit CTTTACAAAGAACCGCACTCCTCGCCACACGGGATTCTCACCC 3948 0.11661738686075329 No Hit AATTTGGAGAGGGCAACTTTGGGGCCGTTCCTTGTCTATGTTC 3527 0.10418174353036395 No Hit ATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATA 3444 0.10173006087852945 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 2.9538345202825046E-5 0.0 0.0 0.0 0.0 9 2.9538345202825046E-5 0.0 0.0 2.9538345202825046E-5 0.0 10 2.9538345202825046E-5 0.0 0.0 2.9538345202825046E-5 0.0 11 2.9538345202825046E-5 0.0 0.0 5.907669040565009E-5 0.0 12 2.9538345202825046E-5 0.0 0.0 1.1815338081130018E-4 0.0 13 2.9538345202825046E-5 0.0 0.0 1.4769172601412524E-4 0.0 14 5.907669040565009E-5 0.0 0.0 1.4769172601412524E-4 0.0 15 5.907669040565009E-5 0.0 0.0 2.9538345202825047E-4 0.0 16 5.907669040565009E-5 2.9538345202825046E-5 0.0 4.135368328395507E-4 0.0 17 5.907669040565009E-5 2.9538345202825046E-5 0.0 7.384586300706262E-4 0.0 18 5.907669040565009E-5 2.9538345202825046E-5 0.0 8.861503560847515E-4 0.0 19 5.907669040565009E-5 2.9538345202825046E-5 0.0 0.0010338420820988766 0.0 20 5.907669040565009E-5 2.9538345202825046E-5 0.0 0.001890454092980803 0.0 21 5.907669040565009E-5 2.9538345202825046E-5 0.0 0.003662754805150306 0.0 22 5.907669040565009E-5 2.9538345202825046E-5 0.0 0.005435055517319809 0.0 23 5.907669040565009E-5 2.9538345202825046E-5 0.0 0.006911972777461061 0.0 24 5.907669040565009E-5 2.9538345202825046E-5 0.0 0.00959996219091814 0.0 25 5.907669040565009E-5 2.9538345202825046E-5 0.0 0.012022106497549794 0.0 26 5.907669040565009E-5 2.9538345202825046E-5 0.0 0.015300862815063375 0.0 27 5.907669040565009E-5 2.9538345202825046E-5 0.0 0.036066319492649386 0.0 28 5.907669040565009E-5 2.9538345202825046E-5 0.0 0.08010799219006152 0.0 29 5.907669040565009E-5 2.9538345202825046E-5 0.0 0.13537423606454718 0.0 30 5.907669040565009E-5 2.9538345202825046E-5 0.0 0.20289889319820525 0.0 31 5.907669040565009E-5 2.9538345202825046E-5 0.0 0.29733298281163695 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6570 0.0 27.482494 1 GTATCAA 10540 0.0 17.183586 2 TCCATCA 2210 0.0 15.988688 2 CCATCAC 2275 0.0 15.531868 3 ATCACTG 2400 0.0 15.2625 5 GTACCGA 110 1.4534491E-5 15.136364 6 GTATTAG 630 0.0 14.68254 1 ACCGCCT 450 0.0 14.388889 12 CATCACT 2550 0.0 14.292157 4 CGACTCT 5570 0.0 14.21544 27 CTCTTCG 5515 0.0 14.155939 30 TCGACTC 5705 0.0 14.041192 26 CTCGACT 5755 0.0 13.790617 25 ACTGTAC 4125 0.0 13.768485 3 CACTGTA 4080 0.0 13.557598 2 TCTTCGA 5795 0.0 13.535807 31 GACTCTT 5825 0.0 13.497853 28 CGAAGGC 5580 0.0 13.42742 35 TCGAAGG 5665 0.0 13.323918 34 TGCATTC 6330 0.0 13.29779 10 >>END_MODULE