##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088425_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1315552 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.654219673566686 31.0 30.0 31.0 28.0 34.0 2 30.87347896548369 31.0 31.0 33.0 27.0 34.0 3 30.89693907956508 31.0 31.0 34.0 27.0 34.0 4 34.641143793631876 35.0 35.0 37.0 32.0 37.0 5 34.440649248376346 35.0 35.0 37.0 30.0 37.0 6 34.64546745396609 35.0 35.0 37.0 31.0 37.0 7 34.45307597115127 35.0 35.0 37.0 30.0 37.0 8 34.572360499622974 35.0 35.0 37.0 30.0 37.0 9 35.95990884434823 37.0 35.0 39.0 30.0 39.0 10 35.71426443044441 37.0 35.0 39.0 30.0 39.0 11 35.84227609398944 37.0 35.0 39.0 30.0 39.0 12 35.62774105470555 37.0 35.0 39.0 30.0 39.0 13 35.727319786675096 37.0 35.0 39.0 30.0 39.0 14 36.430824475201284 38.0 35.0 40.0 30.0 41.0 15 36.50142525723042 38.0 35.0 40.0 30.0 41.0 16 36.294371488166185 38.0 35.0 40.0 30.0 41.0 17 36.4505333122522 38.0 35.0 40.0 30.0 41.0 18 36.319473498577025 38.0 35.0 40.0 30.0 41.0 19 36.44929656904478 38.0 35.0 40.0 30.0 41.0 20 36.35282603804335 38.0 35.0 40.0 30.0 41.0 21 36.18355184743743 38.0 34.0 40.0 29.0 41.0 22 36.08198839726594 38.0 34.0 40.0 29.0 41.0 23 35.8553192880251 38.0 34.0 40.0 27.0 41.0 24 36.01558205224879 38.0 34.0 40.0 29.0 41.0 25 35.98086734693877 38.0 34.0 40.0 29.0 41.0 26 35.71198097832697 38.0 34.0 40.0 27.0 41.0 27 35.62985195568096 38.0 34.0 40.0 27.0 41.0 28 35.38646514923013 38.0 34.0 40.0 27.0 41.0 29 35.20615756731775 38.0 33.0 40.0 27.0 41.0 30 34.98951162705845 37.0 33.0 40.0 26.0 41.0 31 34.663511590571865 37.0 33.0 40.0 25.0 41.0 32 34.47594393836199 37.0 33.0 40.0 25.0 41.0 33 34.23562504560823 37.0 33.0 40.0 24.0 41.0 34 34.084500650677434 37.0 33.0 40.0 24.0 41.0 35 33.77451214395174 36.0 32.0 39.0 23.0 40.0 36 33.635838796185936 36.0 32.0 39.0 22.0 40.0 37 33.42385857799616 36.0 31.0 39.0 21.0 40.0 38 33.290009820972486 36.0 31.0 39.0 21.0 40.0 39 33.136459068132616 36.0 31.0 39.0 19.0 40.0 40 32.977070461676924 36.0 31.0 39.0 18.0 40.0 41 32.70406719004646 36.0 31.0 39.0 16.0 40.0 42 32.41847300600813 36.0 30.0 39.0 15.0 40.0 43 32.0566317408966 35.0 30.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 2.0 13 6.0 14 11.0 15 25.0 16 72.0 17 123.0 18 314.0 19 719.0 20 1378.0 21 2579.0 22 4497.0 23 7150.0 24 10794.0 25 15754.0 26 21328.0 27 28529.0 28 36933.0 29 45664.0 30 55338.0 31 65705.0 32 77021.0 33 91008.0 34 106683.0 35 126245.0 36 155222.0 37 187000.0 38 194800.0 39 80650.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.800214662742334 24.926722774926418 15.744797621074651 20.528264941256598 2 21.902440952543113 25.820188027535206 31.691563693415386 20.585807326506288 3 22.841134367930724 25.496597625939533 32.20952117438155 19.452746831748193 4 16.83559448809321 18.57509243268225 33.67993055386636 30.909382525358176 5 11.97641750383109 41.0021040597407 33.90189061321787 13.119587823210333 6 32.06524713580307 37.947036681180215 12.803978862105033 17.18373732091168 7 24.872448979591837 34.079154605823256 21.337278952105276 19.711117462479628 8 27.87461080975894 34.936057259614216 18.393267616939504 18.796064313687335 9 24.320133297657563 14.025215270852085 21.926157232857385 39.728494198632966 10 16.65407372722629 28.889774026416287 32.89463282333195 21.56151942302547 11 33.270444649850404 22.443886672666682 23.29600046216341 20.9896682153195 12 20.336102259735835 28.46972221546545 31.274552431222784 19.91962309357593 13 32.45124480066162 20.698915740312813 26.87024154119336 19.97959791783221 14 19.862384763202062 23.25708143805794 28.9153146359855 27.965219162754494 15 22.63703753253387 29.929641701734326 26.312528885213204 21.120791880518595 16 20.837412736250638 28.24487363479361 28.061300503514875 22.85641312544088 17 21.611156381503736 26.834743134440902 28.087677263992607 23.466423220062758 18 22.422906886234827 25.14267775048041 30.63436489017538 21.800050473109387 19 22.48348982024276 24.237506385152393 32.30871907761913 20.97028471698572 20 23.0664390309163 24.01706660018 32.29161599085403 20.624878378049672 21 22.03660516650045 24.935920434920096 33.0866434774148 19.94083092116465 22 20.52461628274671 25.314392741602003 32.49480066162341 21.666190314027876 23 21.651519666269365 25.620499987837803 33.40483690496461 19.32314344092822 24 21.52237235776313 25.697273843983364 30.75089392133492 22.029459876918587 25 21.560379217241127 26.065788353482038 31.60969691809978 20.764135511177056 26 21.269094646201747 26.78715854637445 31.793422076816423 20.15032473060738 27 20.4382646980127 26.640680109946242 31.35809150835543 21.56296368368563 28 20.658020359514484 26.618788158886915 31.66792342682007 21.055268054778526 29 21.083393130792246 25.82186032935224 31.0205905961908 22.074155943664714 30 21.082252925007904 26.200256622315194 32.54960655299068 20.167883899686213 31 21.688842402276762 26.170611271922358 32.20191980248595 19.93862652331493 32 21.41526902775413 25.933448468779645 31.260717934372796 21.390564569093428 33 21.050023108170564 26.188246454720147 31.678261292598087 21.083469144511202 34 20.348644523363575 26.92824000875678 32.13419157889616 20.588923888983484 35 19.809707255965556 28.825618447617423 31.141072340736052 20.223601955680962 36 22.37653851767167 26.327275546690664 30.838157670696408 20.458028264941255 37 21.21474483714821 27.24780168324779 30.646831140084164 20.890622339519837 38 21.194449174186957 25.56774646688234 31.982544209578943 21.255260149351756 39 20.451339057673128 25.579148524725742 32.6639311863005 21.305581231300625 40 19.519562890710514 26.426777504804065 31.784300430541705 22.269359173943716 41 21.109845904988934 25.374975675609935 31.80353190143757 21.711646517963562 42 20.114446255260148 27.277218992483764 30.889238889834836 21.719095862421252 43 20.632327722507355 27.015579771837224 30.118231738464157 22.233860767191263 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 94.0 1 156.5 2 219.0 3 401.0 4 583.0 5 583.0 6 1181.5 7 1780.0 8 2274.0 9 2768.0 10 4319.5 11 5871.0 12 5871.0 13 12566.0 14 19261.0 15 31528.0 16 43795.0 17 38075.5 18 32356.0 19 32356.0 20 36418.0 21 40480.0 22 31013.0 23 21546.0 24 22384.5 25 23223.0 26 23223.0 27 25290.5 28 27358.0 29 29736.5 30 32115.0 31 35304.0 32 38493.0 33 38493.0 34 42978.0 35 47463.0 36 52036.5 37 56610.0 38 60331.0 39 64052.0 40 64052.0 41 66642.0 42 69232.0 43 72945.5 44 76659.0 45 82913.5 46 89168.0 47 89168.0 48 116702.5 49 144237.0 50 133309.0 51 122381.0 52 110396.0 53 98411.0 54 98411.0 55 85868.5 56 73326.0 57 61830.5 58 50335.0 59 44360.5 60 38386.0 61 38386.0 62 33901.5 63 29417.0 64 25552.0 65 21687.0 66 18493.5 67 15300.0 68 15300.0 69 13081.0 70 10862.0 71 8982.5 72 7103.0 73 5959.5 74 4816.0 75 4816.0 76 3817.5 77 2819.0 78 2198.5 79 1578.0 80 1220.0 81 862.0 82 862.0 83 650.5 84 439.0 85 336.0 86 233.0 87 176.5 88 120.0 89 120.0 90 96.5 91 73.0 92 53.0 93 33.0 94 19.0 95 5.0 96 5.0 97 3.5 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1315552.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.68370243596593 #Duplication Level Percentage of deduplicated Percentage of total 1 84.66154371808005 45.4494512073093 2 8.696752215019876 9.337477161409092 3 2.4975249193704743 4.02229153793683 4 1.12742742205196 2.4209791297434236 5 0.6236288988875994 1.6739354119175487 6 0.42453397967973183 1.3674333503449878 7 0.28922464385669566 1.086865480256575 8 0.22291936401543183 0.9573709444015372 9 0.1783900762384464 0.8618975793282629 >10 1.0996779731545665 11.19656620659411 >50 0.10151582989015631 3.815439012714345 >100 0.06691592780928605 6.778222409059727 >500 0.005540803512604234 2.0930624602452528 >1k 0.003693869008402822 3.804396333472778 >5k 2.8414376987714017E-4 1.0214767164692151 >10k+ 4.2621565481571025E-4 4.113135058797006 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 22164 1.6847680669407215 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 19681 1.4960260027729804 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12084 0.91854977986427 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8185 0.622172289654837 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 5208 0.3958794483228333 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 4815 0.3660060567731264 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 4270 0.3245785799421079 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3838 0.29174065335311716 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3430 0.2607270560190703 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 3244 0.24658850429325482 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2531 0.19239072267762886 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2127 0.161681180219406 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1815 0.13796489990513489 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1726 0.13119967891805112 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 1726 0.13119967891805112 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1696 0.12891926734937123 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1662 0.12633480090486732 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1464 0.11128408455157988 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 1363 0.10360669893702415 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1359 0.10330264406120016 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 7.601371895599717E-5 0.0 3 7.601371895599717E-5 0.0 0.0 7.601371895599717E-5 0.0 4 7.601371895599717E-5 0.0 0.0 7.601371895599717E-5 0.0 5 7.601371895599717E-5 0.0 0.0 7.601371895599717E-5 0.0 6 7.601371895599717E-5 0.0 0.0 7.601371895599717E-5 0.0 7 7.601371895599717E-5 0.0 0.0 7.601371895599717E-5 0.0 8 7.601371895599717E-5 0.0 0.0 7.601371895599717E-5 0.0 9 1.5202743791199435E-4 0.0 0.0 2.2804115686799153E-4 0.0 10 1.5202743791199435E-4 0.0 0.0 2.2804115686799153E-4 0.0 11 1.5202743791199435E-4 0.0 0.0 5.320960326919802E-4 0.0 12 1.5202743791199435E-4 0.0 0.0 5.320960326919802E-4 0.0 13 1.5202743791199435E-4 0.0 0.0 6.081097516479774E-4 0.0 14 2.2804115686799153E-4 0.0 0.0 6.081097516479774E-4 0.0 15 3.040548758239887E-4 0.0 0.0 7.601371895599718E-4 0.0 16 3.040548758239887E-4 0.0 0.0 9.881783464279633E-4 0.0 17 3.040548758239887E-4 0.0 0.0 0.0015202743791199436 0.0 18 3.040548758239887E-4 0.0 0.0 0.0018243292549439323 0.0 19 3.800685947799859E-4 0.0 0.0 0.0027364938824158986 0.0 20 3.800685947799859E-4 0.0 0.0 0.0052449466079638055 0.0 21 3.800685947799859E-4 0.0 0.0 0.010185838340103621 0.0 22 4.5608231373598306E-4 0.0 0.0 0.017559169078835347 0.0 23 4.5608231373598306E-4 0.0 0.0 0.022728101967843157 0.0 24 4.5608231373598306E-4 0.0 0.0 0.02911325436014692 0.0 25 4.5608231373598306E-4 0.0 0.0 0.03337002262168276 0.0 26 5.320960326919802E-4 0.0 0.0 0.04119943567415047 0.0 27 5.320960326919802E-4 0.0 0.0 0.08232285762934495 0.0 28 5.320960326919802E-4 0.0 0.0 0.161757193938362 0.0 29 5.320960326919802E-4 0.0 0.0 0.2639956459341782 0.0 30 5.320960326919802E-4 0.0 0.0 0.404849067159641 0.0 31 5.320960326919802E-4 0.0 0.0 0.5587768480455353 7.601371895599717E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5870 0.0 24.36201 1 TATACCG 40 0.0019313352 23.125 5 GCGTGTC 45 0.003826097 20.555557 11 TAGACTC 50 0.007035409 18.5 5 GTATCAA 8475 0.0 16.851917 2 GTATTGG 530 0.0 16.754717 1 CGAACTA 265 0.0 16.056604 24 TACCCGG 70 0.0025927608 15.857142 5 TCCTCGA 70 0.0025927608 15.857142 23 TAACCCG 70 0.0025927608 15.857142 5 TACACAG 235 0.0 15.744681 5 GACGTAT 145 5.3467375E-8 15.310345 28 TTAACGG 160 1.0966687E-8 15.03125 35 TTTACAC 185 3.0559022E-10 15.0 3 ACGTATA 150 8.102688E-8 14.8 29 TTTTTAC 870 0.0 14.672413 1 GGTAAGA 240 0.0 14.645833 2 GGGTAAG 205 9.276846E-11 14.439024 1 TCCGACG 90 8.275133E-4 14.388889 23 GGTTACA 90 8.275133E-4 14.388889 1 >>END_MODULE