##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088423_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 679665 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.59018339917459 31.0 30.0 31.0 28.0 34.0 2 30.80704758962136 31.0 31.0 33.0 27.0 34.0 3 30.806058867236064 31.0 30.0 34.0 27.0 34.0 4 34.540735509405366 35.0 35.0 37.0 32.0 37.0 5 34.329378443792166 35.0 35.0 37.0 30.0 37.0 6 34.56469584280491 35.0 35.0 37.0 31.0 37.0 7 34.356793420287936 35.0 35.0 37.0 30.0 37.0 8 34.49225574363841 35.0 35.0 37.0 30.0 37.0 9 35.84247827974075 37.0 35.0 39.0 30.0 39.0 10 35.59884943317664 37.0 35.0 39.0 30.0 39.0 11 35.74790080407259 37.0 35.0 39.0 30.0 39.0 12 35.515476006562054 37.0 35.0 39.0 30.0 39.0 13 35.63489513216069 37.0 35.0 39.0 30.0 39.0 14 36.26635916223434 38.0 34.0 40.0 30.0 41.0 15 36.37890578446735 38.0 35.0 40.0 30.0 41.0 16 36.150759565374116 38.0 34.0 40.0 29.0 41.0 17 36.32300030161918 38.0 35.0 40.0 30.0 41.0 18 36.21792942111187 38.0 35.0 40.0 30.0 41.0 19 36.33897287634349 38.0 35.0 40.0 30.0 41.0 20 36.25729587370249 38.0 34.0 40.0 30.0 41.0 21 36.093741769842495 38.0 34.0 40.0 29.0 41.0 22 35.97827164853273 38.0 34.0 40.0 29.0 41.0 23 35.74268499922756 38.0 34.0 40.0 27.0 41.0 24 35.902334238190875 38.0 34.0 40.0 29.0 41.0 25 35.852773057315 38.0 34.0 40.0 28.0 41.0 26 35.56156341727174 38.0 34.0 40.0 27.0 41.0 27 35.4582007312426 38.0 34.0 40.0 27.0 41.0 28 35.21048163433456 38.0 33.0 40.0 27.0 41.0 29 35.00926927236212 38.0 33.0 40.0 26.0 41.0 30 34.77498620643994 37.0 33.0 40.0 25.0 41.0 31 34.42175630641566 37.0 33.0 40.0 25.0 41.0 32 34.23456997197149 37.0 33.0 39.0 24.0 41.0 33 33.99047324785004 36.0 33.0 39.0 24.0 40.0 34 33.80575136280373 36.0 32.0 39.0 23.0 40.0 35 33.465280689751566 36.0 31.0 39.0 22.0 40.0 36 33.30169568831704 36.0 31.0 39.0 21.0 40.0 37 33.0717059139429 36.0 31.0 39.0 20.0 40.0 38 32.90821654785814 35.0 31.0 39.0 19.0 40.0 39 32.724676127209726 35.0 31.0 39.0 18.0 40.0 40 32.52039902010549 35.0 30.0 39.0 16.0 40.0 41 32.21221042719575 35.0 30.0 39.0 15.0 40.0 42 31.874960458461153 35.0 30.0 39.0 14.0 40.0 43 31.496734420633693 35.0 29.0 39.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 3.0 14 6.0 15 16.0 16 31.0 17 72.0 18 199.0 19 421.0 20 859.0 21 1502.0 22 2598.0 23 4176.0 24 6003.0 25 8538.0 26 11908.0 27 15834.0 28 20201.0 29 25341.0 30 30022.0 31 35678.0 32 41084.0 33 48145.0 34 56644.0 35 66029.0 36 81925.0 37 95168.0 38 91276.0 39 35985.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.783518350952306 25.305407811201107 16.0155370660546 19.895536771791985 2 22.126341653608765 26.501438208529205 31.007481626977995 20.364738510884038 3 23.66474660310594 25.246555288267015 32.32106993886694 18.767628169760105 4 17.39371602186371 18.578417308526994 32.781296668211546 31.24657000139775 5 11.803903393583603 41.712461286074756 33.45368674273355 13.029948577608085 6 32.32283551455497 37.70254463596036 12.486298397004408 17.488321452480264 7 24.427622431639115 34.45785791529651 21.123936056733832 19.990583596330545 8 28.444012859276263 34.87747640381659 18.296219461058023 18.38229127584913 9 24.149838523390198 14.1809567948916 22.262879506815857 39.40632517490234 10 16.876255213965706 29.355638439525357 32.35226177602201 21.415844570486932 11 32.921365672794686 22.544783091670162 23.274112982130905 21.25973825340425 12 19.972633576835648 28.983249100659886 31.387963187746905 19.656154134757564 13 32.968741953756634 20.58028587613015 26.977407987758674 19.47356418235454 14 19.424128063089903 23.779361891520086 29.193646870149266 27.602863175240742 15 22.30039799018634 30.527539302450474 26.53969234843636 20.632370358926824 16 20.440805396776355 28.42885833462073 28.26112864425857 22.869207624344345 17 21.31932643287502 27.175446727431897 28.46358132315185 23.041645516541237 18 22.09191292769232 25.20535852221315 31.102234188901885 21.600494361192645 19 21.846497907057152 24.53090860938845 32.971537448596 20.651056034958398 20 22.556406464949642 24.522080730948336 32.86780987692467 20.05370292717736 21 21.745860092839855 25.359110738378465 33.55667865786822 19.338350510913465 22 20.106523066510707 25.74032795568405 32.84412173644369 21.30902724136155 23 21.236050112923277 26.059308629986834 33.73559032758786 18.969050929502036 24 21.134970904783977 25.98162329971383 31.34352953293166 21.53987626257053 25 21.03448022187401 26.57927067010954 32.053732353438825 20.33251675457762 26 20.942670286096828 27.164853273303756 32.26192315331818 19.630553287281234 27 20.0104463228208 26.991973987184863 32.0256302737378 20.97194941625654 28 20.24776912155253 27.192072565160778 32.074624999080434 20.485533314206265 29 20.523493191498755 26.191432543973868 31.591298654484195 21.693775610043183 30 20.50260054585715 26.85440621482642 33.18958604606681 19.453407193249618 31 21.12467171327051 26.77554383409474 32.745838023143754 19.353946429490996 32 20.797451685756954 26.551315721715845 31.735340204365386 20.915892388161815 33 20.526582948952793 26.96151780656647 31.81508537294108 20.696813871539653 34 19.77415344324042 27.749111694731965 32.37344868427828 20.103286177749332 35 19.169590901399953 29.753628625867158 31.55628140333841 19.520499069394482 36 21.823692554420195 26.934887039938793 31.34426518946834 19.897155216172674 37 20.57734324998345 28.11179036731331 31.00130211206992 20.309564270633327 38 20.660472438627853 26.141260768172554 32.51248776971008 20.685779023489516 39 19.97925448566573 26.178779251543038 33.32259274789786 20.519373514893367 40 18.782341300493627 27.175888121353903 32.270898163065624 21.770872415086846 41 20.570280947231357 26.121103779067628 32.20969153921417 21.098923734486842 42 19.450317435795576 28.00718000779796 31.339998381555617 21.202504174850844 43 19.755467767208845 27.8787343764943 30.514444616097634 21.851353240199213 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 58.0 1 85.5 2 113.0 3 232.0 4 351.0 5 351.0 6 731.0 7 1111.0 8 1341.5 9 1572.0 10 2538.0 11 3504.0 12 3504.0 13 7723.5 14 11943.0 15 19621.5 16 27300.0 17 23364.5 18 19429.0 19 19429.0 20 21535.0 21 23641.0 22 18137.5 23 12634.0 24 13240.5 25 13847.0 26 13847.0 27 14638.0 28 15429.0 29 16300.5 30 17172.0 31 18495.5 32 19819.0 33 19819.0 34 21752.0 35 23685.0 36 25464.0 37 27243.0 38 28790.5 39 30338.0 40 30338.0 41 31359.5 42 32381.0 43 34219.5 44 36058.0 45 39495.0 46 42932.0 47 42932.0 48 58698.0 49 74464.0 50 68846.5 51 63229.0 52 57361.5 53 51494.0 54 51494.0 55 44824.0 56 38154.0 57 32084.5 58 26015.0 59 22726.0 60 19437.0 61 19437.0 62 16866.0 63 14295.0 64 12437.5 65 10580.0 66 9023.0 67 7466.0 68 7466.0 69 6299.5 70 5133.0 71 4268.0 72 3403.0 73 2845.0 74 2287.0 75 2287.0 76 1847.0 77 1407.0 78 1112.0 79 817.0 80 629.0 81 441.0 82 441.0 83 343.0 84 245.0 85 187.0 86 129.0 87 92.0 88 55.0 89 55.0 90 43.5 91 32.0 92 23.5 93 15.0 94 10.0 95 5.0 96 5.0 97 3.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 679665.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.25855217079988 #Duplication Level Percentage of deduplicated Percentage of total 1 87.30816781244836 50.86447449438474 2 7.2934006543954295 8.498059250532842 3 1.946232970761751 3.4015414519096296 4 0.8785503361635113 2.047322823762228 5 0.5135950229003944 1.4960651218152892 6 0.34924149428133755 1.2207782288878448 7 0.26905954177590163 1.0972513546122014 8 0.1873737156811757 0.873289711235872 9 0.13825826417094023 0.7249253666622258 >10 0.9760412141676278 10.976800848799769 >50 0.08359145690423612 3.3007703807397877 >100 0.047115148165829346 5.162846140109866 >500 0.006079373956869573 2.4688985543503477 >1k 0.0025330724820289887 3.258709974725904 >5k 2.5330724820289886E-4 0.9763438634537898 >10k+ 5.066144964057977E-4 3.6319224340177176 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 13548 1.993334951777714 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11063 1.627713653049664 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6616 0.9734207293298904 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4933 0.7257987390846962 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2753 0.40505248909389185 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2454 0.36106022820065764 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2284 0.33604790595366835 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2233 0.32854420927957156 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2102 0.30927000801865623 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1481 0.2179014661634776 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1448 0.21304613302141495 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1359 0.19995144666857936 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 1035 0.15228090309196443 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 990 0.145659994261879 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 988 0.14536573164720853 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 938 0.138009166280447 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 925 0.13609645928508898 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 829 0.12197185378090677 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 769 0.11314397534079289 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 750 0.1103484805014235 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 744 0.10946569265741211 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 726 0.10681732912537795 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 717 0.10549314735936086 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 689 0.10137347075397439 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 1.4713130733523132E-4 0.0 8 0.0 0.0 0.0 1.4713130733523132E-4 0.0 9 0.0 0.0 0.0 1.4713130733523132E-4 0.0 10 1.4713130733523132E-4 0.0 0.0 1.4713130733523132E-4 0.0 11 1.4713130733523132E-4 0.0 0.0 2.9426261467046264E-4 0.0 12 4.4139392200569395E-4 0.0 0.0 4.4139392200569395E-4 0.0 13 4.4139392200569395E-4 0.0 0.0 4.4139392200569395E-4 0.0 14 4.4139392200569395E-4 0.0 0.0 8.827878440113879E-4 0.0 15 4.4139392200569395E-4 0.0 0.0 0.0010299191513466193 0.0 16 4.4139392200569395E-4 0.0 0.0 0.0014713130733523133 0.0 17 4.4139392200569395E-4 0.0 0.0 0.0019127069953580073 0.0 18 4.4139392200569395E-4 0.0 0.0 0.0025012322246989326 0.0 19 4.4139392200569395E-4 0.0 0.0 0.0035311513760455516 0.0 20 4.4139392200569395E-4 0.0 0.0 0.007503696674096797 0.0 21 4.4139392200569395E-4 0.0 0.0 0.013683211582176514 0.0 22 4.4139392200569395E-4 0.0 0.0 0.023541009173637013 0.0 23 4.4139392200569395E-4 0.0 0.0 0.030603311925728117 0.0 24 4.4139392200569395E-4 0.0 0.0 0.04016684690251815 0.0 25 4.4139392200569395E-4 0.0 0.0 0.04767054357661495 0.0 26 4.4139392200569395E-4 0.0 0.0 0.05664555332406406 0.0 27 5.885252293409253E-4 0.0 0.0 0.0976951880705936 0.0 28 5.885252293409253E-4 0.0 0.0 0.1818542958663459 0.0 29 5.885252293409253E-4 0.0 0.0 0.2901429380650762 0.0 30 5.885252293409253E-4 0.0 0.0 0.44301236638638153 0.0 31 5.885252293409253E-4 0.0 0.0 0.6132432889732442 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGTT 45 1.3224348E-4 24.666666 24 CAGAACG 70 5.096863E-6 21.142857 22 GGTATCA 3645 0.0 20.60631 1 CTGACTG 45 0.0038242233 20.555555 9 ACGTTTA 55 5.140121E-4 20.181818 26 ATCCTAC 60 9.2315197E-4 18.5 1 TGTATAC 60 9.2315197E-4 18.5 3 ATAACAC 50 0.007031996 18.5 3 TATACTT 150 1.2732926E-11 18.5 5 TAAGCCG 60 9.2315197E-4 18.5 36 TAAGCCC 60 9.2315197E-4 18.5 4 TAAGAGG 50 0.007031996 18.5 4 CGAGGCT 155 2.0008883E-11 17.903227 33 TGCACTG 115 6.393384E-8 17.695652 5 TAATACT 170 5.456968E-12 17.411764 4 CTTAACC 75 2.0657007E-4 17.266666 3 GTACACG 75 2.0657007E-4 17.266666 4 ACGGGTT 75 2.0657007E-4 17.266666 5 GTATACT 75 2.0657007E-4 17.266666 4 GCCCGGT 75 2.0657007E-4 17.266666 22 >>END_MODULE