##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088422_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 423120 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27283749290981 31.0 31.0 34.0 30.0 34.0 2 31.516581584420496 31.0 31.0 34.0 30.0 34.0 3 31.6075770467007 31.0 31.0 34.0 30.0 34.0 4 35.40873511060692 37.0 35.0 37.0 33.0 37.0 5 35.23500189071658 37.0 35.0 37.0 33.0 37.0 6 35.27239317451314 37.0 35.0 37.0 32.0 37.0 7 35.13431414256003 37.0 35.0 37.0 32.0 37.0 8 35.162811968235964 37.0 35.0 37.0 32.0 37.0 9 36.6467503308754 39.0 35.0 39.0 32.0 39.0 10 36.54684486670448 39.0 35.0 39.0 32.0 39.0 11 36.65799536774438 39.0 35.0 39.0 32.0 39.0 12 36.515241539043295 38.0 35.0 39.0 32.0 39.0 13 36.53396435999244 39.0 35.0 39.0 32.0 39.0 14 37.508468046889774 39.0 36.0 41.0 32.0 41.0 15 37.50398941198714 39.0 36.0 41.0 32.0 41.0 16 37.4591534316506 39.0 36.0 41.0 32.0 41.0 17 37.53607014558518 39.0 36.0 41.0 32.0 41.0 18 37.529284836453016 39.0 36.0 41.0 32.0 41.0 19 37.61581820760068 39.0 37.0 41.0 32.0 41.0 20 37.56656504065041 39.0 36.0 41.0 32.0 41.0 21 37.50038996029495 39.0 36.0 41.0 32.0 41.0 22 37.412329835507656 39.0 36.0 41.0 32.0 41.0 23 37.28053743618832 39.0 36.0 41.0 31.0 41.0 24 37.22352524106636 39.0 36.0 41.0 31.0 41.0 25 37.169720173945926 39.0 36.0 41.0 31.0 41.0 26 36.9175458498771 39.0 35.0 40.0 31.0 41.0 27 36.76043439213462 39.0 35.0 40.0 30.0 41.0 28 36.66163499716392 39.0 35.0 40.0 30.0 41.0 29 36.502197958026095 38.0 35.0 40.0 30.0 41.0 30 36.33450557761392 38.0 35.0 40.0 30.0 41.0 31 36.062058044999056 38.0 35.0 40.0 30.0 41.0 32 35.9037932501418 38.0 35.0 40.0 29.0 41.0 33 35.92955899035734 38.0 35.0 40.0 30.0 41.0 34 35.854395916052184 38.0 35.0 40.0 29.0 41.0 35 35.77015031196824 38.0 35.0 40.0 29.0 41.0 36 35.69502032520325 38.0 35.0 40.0 28.0 41.0 37 35.57919739081112 38.0 34.0 40.0 27.0 41.0 38 35.44538901493666 38.0 34.0 40.0 27.0 41.0 39 35.37436424654944 38.0 34.0 40.0 26.0 41.0 40 35.19322178105502 38.0 34.0 40.0 25.0 41.0 41 35.026774910190966 38.0 34.0 40.0 24.0 41.0 42 34.86015314804311 38.0 34.0 40.0 24.0 41.0 43 34.508947816222346 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 8.0 17 11.0 18 32.0 19 58.0 20 134.0 21 269.0 22 495.0 23 880.0 24 1466.0 25 2337.0 26 3576.0 27 5155.0 28 7304.0 29 9886.0 30 12653.0 31 15837.0 32 18723.0 33 23024.0 34 28464.0 35 34182.0 36 42756.0 37 58101.0 38 74341.0 39 83427.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.813244469653995 22.799205899035734 14.140669313669882 22.246880317640386 2 17.81811306485158 23.04972584609567 36.881026659103796 22.25113442994895 3 19.67857818113065 26.230383815466062 32.09680468897712 21.994233314426168 4 12.988041217621479 16.09354320287389 35.769757988277554 35.14865759122707 5 11.655795046322556 40.31669502741539 34.40678767252789 13.620722253734167 6 31.073690678767253 36.689118926072986 15.778502552467385 16.45868784269238 7 24.468708640574775 35.07917375685385 22.091605218377765 18.36051238419361 8 27.1847230100208 33.932690489695595 20.573359803365477 18.30922669691813 9 25.405322367177156 14.096001134429951 23.717857818113064 36.78081868027982 10 16.460578559273962 27.478493098884478 33.79655889582152 22.26436944602004 11 31.49437511816979 22.400973719039516 25.081300813008127 21.023350349782568 12 20.229013045944413 27.849782567593117 31.64657780298733 20.274626583475136 13 30.689875212705616 21.189969748534697 28.661608999810927 19.45854603894876 14 20.807099640763848 22.837256570240122 28.675789374172812 27.679854414823218 15 22.83512951408584 29.391898279447908 26.89662507090187 20.87634713556438 16 21.66524862923048 28.633957269805254 27.25586122140291 22.444932879561357 17 19.621147664965022 27.427916430327095 28.064142560030252 24.88679334467763 18 20.639298544148232 26.546133484590662 32.095386651540935 20.719181319720175 19 19.92957080733598 25.436046511627907 33.22461712989223 21.409765551143884 20 23.83815466061637 24.39213461902061 32.18708640574778 19.582624314615238 21 23.483408961996595 25.30251465305351 30.895017961807525 20.319058423142373 22 21.95547362450369 24.987237663074303 31.71369824163358 21.343590470788428 23 20.810881073927018 26.555114388353186 32.818349404424275 19.815655133295518 24 19.656125921724332 26.013187748156554 31.419219134051808 22.91146719606731 25 20.727689544337306 26.687464549064092 32.42366231801853 20.161183588580073 26 22.01314048024201 25.952921157118546 31.202968425033088 20.83096993760635 27 20.806390622045758 27.205284552845526 30.75865002836075 21.229674796747968 28 20.564142560030252 26.542588391000187 31.03516732841747 21.85810172055209 29 19.59231423709586 26.72433352240499 31.795944412932503 21.887407827566648 30 19.234968803176404 26.781291359425225 33.43779542446587 20.545944412932503 31 20.512620533182076 26.176971072036302 32.50519947059936 20.805208924182264 32 21.269143505388545 26.428436377387033 30.698856116468143 21.603564000756286 33 22.05426356589147 26.404802420117225 30.447390811117415 21.09354320287389 34 20.77802987332199 28.412270750614482 30.53010966156173 20.279589714501796 35 19.459018718094157 29.369446020041597 30.74517867271696 20.42635658914729 36 20.22570429192664 26.165390432974096 32.39317451314048 21.21573076195878 37 20.33512951408584 26.266071090943466 31.784363773870293 21.614435621100398 38 20.52420117224428 25.85271317829457 32.43831537152581 21.18477027793534 39 21.27197958026092 25.511911514463982 32.333380601247875 20.882728304027225 40 19.755624881830215 26.25118169786349 31.64279636982416 22.350397050482133 41 20.489931934203064 25.861694082057102 31.425600302514656 22.222773681225185 42 18.375638116846286 27.52008886367933 31.78554547173379 22.318727547740593 43 18.932926829268293 27.267205520892418 31.344772168651918 22.45509548118737 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 48.0 1 58.0 2 68.0 3 211.0 4 354.0 5 354.0 6 586.0 7 818.0 8 895.0 9 972.0 10 1439.0 11 1906.0 12 1906.0 13 3299.5 14 4693.0 15 7752.5 16 10812.0 17 10720.0 18 10628.0 19 10628.0 20 11429.0 21 12230.0 22 9992.0 23 7754.0 24 8516.5 25 9279.0 26 9279.0 27 10019.0 28 10759.0 29 11437.5 30 12116.0 31 12841.5 32 13567.0 33 13567.0 34 14647.5 35 15728.0 36 17196.5 37 18665.0 38 19521.0 39 20377.0 40 20377.0 41 21570.5 42 22764.0 43 25614.5 44 28465.0 45 34727.0 46 40989.0 47 40989.0 48 40996.5 49 41004.0 50 37326.5 51 33649.0 52 31414.0 53 29179.0 54 29179.0 55 25447.0 56 21715.0 57 18338.5 58 14962.0 59 13231.0 60 11500.0 61 11500.0 62 10196.0 63 8892.0 64 7724.0 65 6556.0 66 5516.5 67 4477.0 68 4477.0 69 3809.0 70 3141.0 71 2646.5 72 2152.0 73 1724.5 74 1297.0 75 1297.0 76 978.0 77 659.0 78 519.5 79 380.0 80 321.0 81 262.0 82 262.0 83 187.5 84 113.0 85 96.0 86 79.0 87 75.0 88 71.0 89 71.0 90 51.5 91 32.0 92 19.0 93 6.0 94 3.5 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 423120.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.72959562778709 #Duplication Level Percentage of deduplicated Percentage of total 1 86.00719875539883 51.371752027386854 2 8.078786094778382 9.650852532090038 3 2.156144087681735 3.863568434174218 4 1.0008395732086708 2.391189719841637 5 0.580084875486761 1.7324117521309732 6 0.4178300426384908 1.4974091692762854 7 0.30255152495367416 1.2649896169437302 8 0.19906772320037097 0.9512187687441929 9 0.1667630408359266 0.8964620095311038 >10 0.9723443245462097 10.61689140807322 >50 0.06833245856017053 2.7647214154076916 >100 0.041714582258975 5.156178150683244 >500 0.003972817357997619 1.6729281587885714 >1k 0.003575535622197858 3.720544766190923 >5k 7.945634715995238E-4 2.448882070737313 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5318 1.2568538476082434 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5002 1.1821705426356588 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4543 1.0736906787672527 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2305 0.5447627150690112 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1600 0.37814331631688414 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1374 0.3247305728871242 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 1262 0.29826054074494235 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1255 0.29660616373605597 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 1235 0.29187937228209493 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 1076 0.25430138022310456 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 1029 0.24319342030629607 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 871 0.2058517678200038 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 862 0.20372471166572131 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 806 0.19048969559463036 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 752 0.17772735866893552 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 739 0.17465494422386083 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 722 0.17063717148799395 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 685 0.161892607298166 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 584 0.13802231045566268 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 528 0.12478729438457174 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 501 0.11840612592172434 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 479 0.11320665532236716 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 470 0.1110795991680847 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 452 0.10682548685951976 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 445 0.10517110985063338 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 442 0.10446209113253924 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 2.3633957269805257E-4 0.0 10 0.0 0.0 0.0 9.453582907922103E-4 0.0 11 0.0 0.0 0.0 0.002127056154282473 0.0 12 0.0 0.0 0.0 0.0028360748723766306 0.0 13 0.0 0.0 0.0 0.0033087540177727357 0.0 14 0.0 0.0 0.0 0.003781433163168841 0.0 15 0.0 0.0 0.0 0.005672149744753261 0.0 16 0.0 0.0 0.0 0.006853847608243525 0.0 17 0.0 0.0 0.0 0.011344299489506523 0.0 18 0.0 0.0 0.0 0.01205331820760068 0.0 19 0.0 0.0 0.0 0.013944034789185102 0.0 20 0.0 0.0 0.0 0.017252788806957835 0.0 21 0.0 0.0 0.0 0.024579315560597465 0.0 22 0.0 0.0 0.0 0.04159576479485725 0.0 23 0.0 0.0 0.0 0.05790319531102288 0.0 24 0.0 0.0 0.0 0.08626394403478918 0.0 25 0.0 0.0 0.0 0.09500850822461714 0.0 26 0.0 0.0 0.0 0.1051711098506334 0.0 27 0.0 0.0 0.0 0.17961807525051995 0.0 28 0.0 0.0 0.0 0.2734448856116468 0.0 29 0.0 0.0 0.0 0.39137833238797504 0.0 30 0.0 0.0 0.0 0.6700226885989791 0.0 31 0.0 0.0 0.0 1.0628190584231423 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTGACCG 20 0.0018406218 37.0 9 CTATCCA 25 0.005492467 29.6 4 AGACCTA 25 0.005492467 29.6 5 GGTATCA 1260 0.0 29.07143 1 CGTTTAG 35 8.8600954E-4 26.428572 26 AAATGCG 35 8.8600954E-4 26.428572 34 AATGCGT 45 1.3212822E-4 24.666668 35 TGCGTTA 40 0.0019291815 23.125002 37 ATTTTCG 55 5.135716E-4 20.181818 15 ATGCGTT 55 5.135716E-4 20.181818 36 AACAGGC 55 5.135716E-4 20.181818 7 ATCTGCG 55 5.135716E-4 20.181818 36 TCTCTAT 75 9.243098E-6 19.733334 8 ATCTCTA 90 2.1456817E-6 18.5 7 GTTTAGA 60 9.2236703E-4 18.5 1 TGCGTTT 60 9.2236703E-4 18.5 24 TAATCTC 85 2.7165363E-5 17.411764 5 GTATCAA 2140 0.0 17.116823 2 ATTAATC 135 2.2077074E-8 16.444445 3 TCAGGAC 80 3.3762498E-4 16.1875 3 >>END_MODULE