##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088412_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2960825 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.526757913757145 31.0 31.0 34.0 30.0 34.0 2 31.722947827041448 31.0 31.0 34.0 30.0 34.0 3 31.810952015063368 31.0 31.0 34.0 30.0 34.0 4 35.5793810846639 37.0 35.0 37.0 33.0 37.0 5 35.41296800722772 37.0 35.0 37.0 33.0 37.0 6 35.44995904857599 37.0 35.0 37.0 33.0 37.0 7 35.34318272778702 37.0 35.0 37.0 32.0 37.0 8 35.368779647564445 37.0 35.0 37.0 32.0 37.0 9 36.919473119823024 39.0 37.0 39.0 33.0 39.0 10 36.78337355297932 39.0 37.0 39.0 32.0 39.0 11 36.88075553266404 39.0 37.0 39.0 33.0 39.0 12 36.751315596159856 39.0 37.0 39.0 32.0 39.0 13 36.79287833627452 39.0 37.0 39.0 32.0 39.0 14 37.85574696241757 40.0 37.0 41.0 32.0 41.0 15 37.84211191137605 40.0 37.0 41.0 32.0 41.0 16 37.79860140332509 40.0 37.0 41.0 32.0 41.0 17 37.84033740595949 40.0 37.0 41.0 32.0 41.0 18 37.81030658684657 40.0 37.0 41.0 32.0 41.0 19 37.857982150245284 40.0 37.0 41.0 32.0 41.0 20 37.822913546055574 40.0 37.0 41.0 32.0 41.0 21 37.776608884348114 40.0 37.0 41.0 32.0 41.0 22 37.66781049200814 39.0 37.0 41.0 32.0 41.0 23 37.57177644744286 39.0 36.0 41.0 32.0 41.0 24 37.49679430564117 39.0 36.0 41.0 32.0 41.0 25 37.44035868381279 39.0 36.0 41.0 32.0 41.0 26 37.241964655121464 39.0 36.0 41.0 31.0 41.0 27 37.07994224582676 39.0 36.0 41.0 31.0 41.0 28 36.965388025297 39.0 35.0 40.0 31.0 41.0 29 36.82434828130673 39.0 35.0 40.0 30.0 41.0 30 36.65591887396249 39.0 35.0 40.0 30.0 41.0 31 36.46214585461822 38.0 35.0 40.0 30.0 41.0 32 36.324970574079856 38.0 35.0 40.0 30.0 41.0 33 36.407903540398365 38.0 35.0 40.0 30.0 41.0 34 36.388165460640195 38.0 35.0 40.0 30.0 41.0 35 36.310814722248026 38.0 35.0 40.0 30.0 41.0 36 36.235168238582155 38.0 35.0 40.0 30.0 41.0 37 36.1169937432979 38.0 35.0 40.0 30.0 41.0 38 36.00737058083473 38.0 35.0 40.0 29.0 41.0 39 35.95799211368453 38.0 35.0 40.0 28.0 41.0 40 35.819966394501535 38.0 35.0 40.0 27.0 41.0 41 35.702295137335035 38.0 35.0 40.0 27.0 41.0 42 35.558360929808416 38.0 35.0 40.0 26.0 41.0 43 35.23099710384775 38.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 3.0 15 10.0 16 35.0 17 80.0 18 177.0 19 374.0 20 775.0 21 1544.0 22 2888.0 23 4954.0 24 8173.0 25 12975.0 26 19995.0 27 29674.0 28 41708.0 29 57860.0 30 74607.0 31 94208.0 32 116530.0 33 145397.0 34 182412.0 35 227249.0 36 293339.0 37 403758.0 38 555217.0 39 686880.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.827767598557834 21.652309744750195 13.150760345511808 23.369162311180162 2 18.17354960188461 22.641392179544553 35.934950562765444 23.25010765580539 3 19.776650089079904 25.940776641645485 31.335286617750118 22.94728665152449 4 13.171058742073576 15.991961699864058 35.881924801364484 34.955054756697876 5 12.453589793385289 39.216907449781736 34.49852659309483 13.830976163738148 6 31.71977404946257 36.493544873472764 15.977641366848767 15.809039710215902 7 25.743365447130444 33.78443508143845 22.091511656379556 18.380687815051548 8 27.26199623415771 33.526162471608416 20.41417510322292 18.79766619101095 9 25.988736247498583 13.714859878581139 22.48120034112114 37.81520353279914 10 16.660086293516166 26.897368132192884 33.672067751386855 22.77047782290409 11 32.87208801600905 22.092693759340722 24.089873599419082 20.945344625231144 12 20.597738805907138 26.776861178894396 31.26094922867782 21.36445078652065 13 30.365455574037643 20.718313307946264 27.736424814029874 21.179806303986222 14 21.423961227022872 22.14656387999966 27.489095100183224 28.94037979279424 15 23.570930399466363 28.789273259986658 25.445847018989642 22.193949321557334 16 22.768181165722392 27.826636157152144 26.307904047013924 23.09727863011154 17 20.768907314684252 26.828975032296743 27.40790151393615 24.994216139082855 18 21.73286161796121 25.90021362289227 30.493460437546965 21.873464321599553 19 21.234554558273455 25.053490158992847 31.311577009786124 22.400378272947574 20 24.209705065311187 24.28893973807976 30.33313350164228 21.168221694966775 21 23.999898676889043 25.181495022502176 29.443854331140813 21.37475196946797 22 22.952724325145862 24.6728867798671 30.249406837621272 22.12498205736577 23 21.855901649033633 25.766332018947423 31.07140746244712 21.306358869571827 24 21.01988466052536 25.62022409294707 29.904671839774387 23.455219406753187 25 22.055406854508455 25.98961438112688 30.458909256710548 21.496069507654116 26 22.818133459424317 25.685138432700345 29.607491155336774 21.889236952538564 27 22.128731012471185 26.400412047317896 29.298996056842263 22.171860883368655 28 21.71364400124965 26.005251914584615 29.682976872999923 22.598127211165806 29 20.920959529860767 26.051421478810806 30.417366781218075 22.610252210110357 30 20.608039988854458 26.440130706813136 31.321810643992805 21.6300186603396 31 21.689258905879274 25.897275252674508 30.552768231827276 21.86069760961894 32 22.232688524313325 25.848809031266622 29.27673874680199 22.64176369761806 33 22.657941621000905 25.760590375993175 29.186932696123545 22.39453530688237 34 21.948004356893772 27.360448523637835 29.24576764921939 21.445779470249 35 21.19861862825395 28.052012530291385 29.48971992603413 21.259648915420534 36 21.38211478219753 26.004002262882814 30.567932924100543 22.045950030819114 37 21.741305210540983 25.865459795833935 30.1105266268692 22.282708366755887 38 21.52872932375267 25.412613038595662 30.74764634856839 22.31101128908328 39 22.273656835510373 25.090675740714158 30.677496981415654 21.958170442359815 40 21.2321565779808 25.63927283780703 30.31320662315402 22.815363961058154 41 21.45175753379548 25.430277034272542 30.386226811783878 22.7317386201481 42 20.193560916298665 26.571614330465327 30.56894615521012 22.665878598025888 43 20.337405959487644 26.077022451512672 30.331208362534092 23.254363226465596 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 272.0 1 390.0 2 508.0 3 1472.5 4 2437.0 5 2437.0 6 3804.0 7 5171.0 8 5375.5 9 5580.0 10 8170.0 11 10760.0 12 10760.0 13 18629.5 14 26499.0 15 42109.5 16 57720.0 17 57297.0 18 56874.0 19 56874.0 20 61361.5 21 65849.0 22 55018.0 23 44187.0 24 49821.5 25 55456.0 26 55456.0 27 61611.0 28 67766.0 29 72571.5 30 77377.0 31 83744.5 32 90112.0 33 90112.0 34 99206.0 35 108300.0 36 119414.5 37 130529.0 38 138276.0 39 146023.0 40 146023.0 41 154709.5 42 163396.0 43 177848.0 44 192300.0 45 224920.0 46 257540.0 47 257540.0 48 263363.0 49 269186.0 50 251035.0 51 232884.0 52 223043.5 53 213203.0 54 213203.0 55 190663.0 56 168123.0 57 148367.5 58 128612.0 59 116960.0 60 105308.0 61 105308.0 62 94207.0 63 83106.0 64 73595.5 65 64085.0 66 55024.0 67 45963.0 68 45963.0 69 39182.5 70 32402.0 71 27703.5 72 23005.0 73 17935.0 74 12865.0 75 12865.0 76 9782.5 77 6700.0 78 5351.5 79 4003.0 80 3402.5 81 2802.0 82 2802.0 83 2100.0 84 1398.0 85 1198.5 86 999.0 87 904.5 88 810.0 89 810.0 90 675.5 91 541.0 92 328.0 93 115.0 94 81.5 95 48.0 96 48.0 97 28.5 98 9.0 99 5.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2960825.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.98075701272783 #Duplication Level Percentage of deduplicated Percentage of total 1 74.30265680561388 31.935844375621976 2 13.724466263664715 11.797758992159073 3 4.883502995417193 6.296899668508646 4 2.2677188730307005 3.8987309541963806 5 1.192093840143404 2.5618547839786627 6 0.7172425466396933 1.8496576569786454 7 0.4868130565187984 1.4646515585000468 8 0.33352697964836003 1.1468193655564145 9 0.25776529620942473 0.9971052806421987 >10 1.5487895243298169 12.627329046946167 >50 0.156372320581405 4.685046955609273 >100 0.11424957535296056 9.655768666277154 >500 0.008818166804177657 2.6290537720496436 >1k 0.005275153356061171 4.095422134130133 >5k 3.936681609000875E-4 1.2057641260365122 >10k+ 3.1493452872006995E-4 3.15229266280916 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 28607 0.9661834117180178 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 26921 0.9092398233600432 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 25208 0.8513843270034535 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 12416 0.41934258188173906 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9684 0.3270710021700033 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 6732 0.2273690609880692 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6721 0.22699754291455929 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 6406 0.21635861626404804 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 6088 0.20561836650257953 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 4990 0.168534107892226 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 4988 0.16846655915158784 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 4665 0.1575574375385239 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 4007 0.13533390186856706 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3898 0.13165249550378694 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3851 0.13006510009879005 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3471 0.11723083937753835 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3315 0.11196203760776136 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 3016 0.10186350088235542 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.377437031908337E-5 2 0.0 0.0 0.0 3.377437031908337E-5 3.377437031908337E-5 3 0.0 0.0 0.0 3.377437031908337E-5 3.377437031908337E-5 4 0.0 0.0 0.0 6.754874063816673E-5 3.377437031908337E-5 5 0.0 0.0 0.0 1.013231109572501E-4 3.377437031908337E-5 6 0.0 0.0 0.0 1.013231109572501E-4 3.377437031908337E-5 7 0.0 0.0 0.0 1.6887185159541681E-4 3.377437031908337E-5 8 0.0 0.0 0.0 2.026462219145002E-4 3.377437031908337E-5 9 0.0 0.0 0.0 3.3774370319083363E-4 3.377437031908337E-5 10 0.0 0.0 0.0 4.3906681414808375E-4 3.377437031908337E-5 11 0.0 0.0 0.0 6.079386657435005E-4 1.013231109572501E-4 12 0.0 0.0 0.0 8.781336282961675E-4 1.013231109572501E-4 13 0.0 0.0 0.0 9.119079986152508E-4 1.013231109572501E-4 14 0.0 0.0 0.0 0.0010807798502106677 1.013231109572501E-4 15 0.0 0.0 0.0 0.001486072294039668 1.013231109572501E-4 16 0.0 0.0 0.0 0.002330431552016752 1.013231109572501E-4 17 0.0 0.0 0.0 0.0033774370319083363 1.013231109572501E-4 18 0.0 0.0 0.0 0.00371518073509917 1.013231109572501E-4 19 0.0 0.0 0.0 0.00422179628988542 1.013231109572501E-4 20 0.0 0.0 0.0 0.005471447991691505 1.013231109572501E-4 21 0.0 0.0 0.0 0.0072952639889220065 1.3509748127633347E-4 22 0.0 0.0 0.0 0.011989901463274595 1.3509748127633347E-4 23 0.0 0.0 0.0 0.019622909155387433 1.3509748127633347E-4 24 0.0 0.0 0.0 0.03053203076845136 1.3509748127633347E-4 25 0.0 0.0 0.0 0.0359359300195047 1.3509748127633347E-4 26 0.0 0.0 0.0 0.045460302449486206 1.3509748127633347E-4 27 0.0 0.0 0.0 0.11040841657308352 1.3509748127633347E-4 28 0.0 0.0 0.0 0.1831584102403891 1.3509748127633347E-4 29 0.0 0.0 0.0 0.2717485835873447 1.3509748127633347E-4 30 0.0 0.0 0.0 0.4202207155100352 1.3509748127633347E-4 31 0.0 0.0 0.0 0.6570803745577668 1.3509748127633347E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7555 0.0 25.735935 1 ACCGTTA 125 8.594725E-9 17.76 8 ACGTTTA 170 5.456968E-12 17.411766 26 GTATTGG 1115 0.0 16.923767 1 TCTAACG 100 5.8840888E-6 16.65 2 CCCGTAT 90 4.4497647E-5 16.444445 1 ATTGGAC 1070 0.0 16.425234 3 CGAACGA 230 0.0 16.086956 16 TTACGGC 140 3.478999E-8 15.857143 18 CGCGATA 130 2.5927875E-7 15.653846 14 GTATCAA 12475 0.0 15.600801 2 CGAGCCG 450 0.0 14.8 15 GACCGTG 245 0.0 14.34694 7 TTGGACC 1695 0.0 14.2979355 4 TGGACCC 1640 0.0 13.875001 5 AAGACCG 255 1.8189894E-12 13.784313 5 GGACCCT 1600 0.0 13.759374 6 CGCGTAT 110 2.45841E-4 13.454545 24 TAGTACG 110 2.45841E-4 13.454545 4 ACCGTCG 400 0.0 13.412499 8 >>END_MODULE