##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088403_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2551514 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.4030740180144 31.0 31.0 34.0 30.0 34.0 2 31.60352637688839 31.0 31.0 34.0 30.0 34.0 3 31.68801856466396 31.0 31.0 34.0 30.0 34.0 4 35.47949021639701 37.0 35.0 37.0 33.0 37.0 5 35.29567033533816 37.0 35.0 37.0 33.0 37.0 6 35.325802641098576 37.0 35.0 37.0 32.0 37.0 7 35.20925419182493 37.0 35.0 37.0 32.0 37.0 8 35.23865359939236 37.0 35.0 37.0 32.0 37.0 9 36.75721238449015 39.0 37.0 39.0 32.0 39.0 10 36.6215658624644 39.0 35.0 39.0 32.0 39.0 11 36.722079126354 39.0 35.0 39.0 32.0 39.0 12 36.59335280935162 39.0 35.0 39.0 32.0 39.0 13 36.63398162816273 39.0 35.0 39.0 32.0 39.0 14 37.66567261633681 39.0 37.0 41.0 32.0 41.0 15 37.64694373615038 39.0 36.0 41.0 32.0 41.0 16 37.6020582289574 39.0 36.0 41.0 32.0 41.0 17 37.64830802417702 39.0 36.0 41.0 32.0 41.0 18 37.62442298964458 39.0 36.0 41.0 32.0 41.0 19 37.67715677828928 40.0 37.0 41.0 32.0 41.0 20 37.643757784593774 39.0 37.0 41.0 32.0 41.0 21 37.594203676719 39.0 36.0 41.0 32.0 41.0 22 37.481880953818006 39.0 36.0 41.0 32.0 41.0 23 37.38640587510004 39.0 36.0 41.0 32.0 41.0 24 37.30956012782999 39.0 36.0 41.0 31.0 41.0 25 37.255517704390414 39.0 36.0 41.0 31.0 41.0 26 37.03984967356636 39.0 36.0 41.0 31.0 41.0 27 36.87613393459726 39.0 35.0 40.0 31.0 41.0 28 36.76593504875929 39.0 35.0 40.0 30.0 41.0 29 36.62331580387174 39.0 35.0 40.0 30.0 41.0 30 36.45498829322512 38.0 35.0 40.0 30.0 41.0 31 36.24749188129087 38.0 35.0 40.0 30.0 41.0 32 36.107109739550715 38.0 35.0 40.0 30.0 41.0 33 36.17817342957946 38.0 35.0 40.0 30.0 41.0 34 36.152477705393736 38.0 35.0 40.0 30.0 41.0 35 36.06598983975788 38.0 35.0 40.0 30.0 41.0 36 35.99320246724102 38.0 35.0 40.0 29.0 41.0 37 35.87150060709053 38.0 35.0 40.0 29.0 41.0 38 35.76271931096596 38.0 35.0 40.0 28.0 41.0 39 35.70800826489684 38.0 35.0 40.0 27.0 41.0 40 35.56952303612679 38.0 34.0 40.0 27.0 41.0 41 35.445382623806886 38.0 34.0 40.0 26.0 41.0 42 35.30122546848656 38.0 34.0 40.0 25.0 41.0 43 34.96423848742354 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 4.0 15 9.0 16 23.0 17 67.0 18 135.0 19 314.0 20 760.0 21 1536.0 22 2858.0 23 4847.0 24 8052.0 25 13023.0 26 19757.0 27 29344.0 28 40812.0 29 55307.0 30 71721.0 31 88223.0 32 108280.0 33 132322.0 34 162879.0 35 199251.0 36 253145.0 37 343035.0 38 462889.0 39 552920.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.61497840105914 21.962254567288284 13.212821877520561 23.209945154132015 2 18.1530260073039 22.919646923356094 35.71197336169819 23.215353707641817 3 19.790250024103337 26.067542643309032 31.474841995771925 22.66736533681571 4 13.204513085172175 16.091073770318328 36.0286872813553 34.67572586315419 5 12.29046754201623 39.52273042593535 34.45115331524734 13.735648716801082 6 31.63333612905906 36.72066859127561 15.898639004136367 15.74735627552896 7 25.46950555630892 34.03681108549669 22.221865135758613 18.271818222435776 8 27.264047933893366 33.597581671117624 20.463889282990415 18.6744811119986 9 25.90015183142244 13.691714017638153 22.67238196615813 37.735752184781276 10 16.511804363997218 27.1242485833901 33.784843038290205 22.579104014322475 11 32.61977006592948 22.292920987304008 24.098398049158266 20.988910897608243 12 20.348781155031876 27.125150008975062 31.42236334976018 21.10370548623288 13 30.219430502830868 20.927182841246413 27.918247754078557 20.935138901844162 14 21.236489394140108 22.30420840332446 27.82861469699951 28.630687505535928 15 23.488485659886642 28.917967920223052 25.632467625104155 21.961078794786154 16 22.52035458163271 27.969746589671857 26.63132555808042 22.878573270615014 17 20.504100702563264 27.063892261614086 27.695752404258805 24.73625463156385 18 21.31126852527558 26.22830993676695 30.772592272666344 21.687829265291118 19 20.940939379521335 25.33762307398666 31.665669872867642 22.055767673624366 20 23.884564223437536 24.640742711974145 30.59054349691987 20.88414956766845 21 23.75205466244747 25.370348741962616 29.682533585941524 21.19506300964839 22 22.644986466858498 24.984264244679824 30.52677743488768 21.843971853573997 23 21.625905246845598 26.075929820490895 31.30043574128929 20.99772919137422 24 20.799297985431394 25.77387386469367 30.286096803701646 23.14073134617329 25 21.74748012356585 26.23795127128442 30.672847572068974 21.341721033080752 26 22.588666964006467 25.922256354462487 29.838989713558302 21.65008696797274 27 21.81379369268599 26.711552435142426 29.585336392432097 21.889317479739482 28 21.43390159724775 26.405890777005336 29.872812769202913 22.287394856543997 29 20.63519933655077 26.388175804639914 30.70067418795272 22.2759506708566 30 20.408784745057247 26.635911070838723 31.591165088649326 21.3641390954547 31 21.40517355577904 26.209340807065924 30.827775195432988 21.55771044172205 32 21.94434363283917 26.174851480336773 29.599014545873548 22.28179034095051 33 22.292764217637057 26.17826122059295 29.503816165617746 22.025158396152243 34 21.673602418015342 27.690970929416807 29.502718777949095 21.132707874618756 35 20.795927437591956 28.300530586937793 29.80528423516391 21.098257740306344 36 21.210112897675653 26.310927551249964 30.77333692858436 21.70562262249002 37 21.46102274963022 26.161016557228372 30.37890444653645 21.999056246604955 38 21.283677063892263 25.798133970654284 30.938454580300167 21.979734385153286 39 21.964606112292547 25.4548084000323 30.930576904535894 21.650008583139265 40 20.898885916361813 25.884710019227803 30.576669381394733 22.639734683015654 41 21.27666162129622 25.65077048372065 30.560051796697962 22.512516098285175 42 19.891092112369364 26.823525169761954 30.773493698251315 22.511889019617374 43 20.08219433638224 26.398875334409293 30.487859365067173 23.03107096414129 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 258.0 1 362.5 2 467.0 3 1275.5 4 2084.0 5 2084.0 6 3416.5 7 4749.0 8 5004.0 9 5259.0 10 7646.0 11 10033.0 12 10033.0 13 17291.5 14 24550.0 15 38884.0 16 53218.0 17 51993.5 18 50769.0 19 50769.0 20 55173.5 21 59578.0 22 50004.0 23 40430.0 24 45782.0 25 51134.0 26 51134.0 27 55974.0 28 60814.0 29 65298.5 30 69783.0 31 76026.0 32 82269.0 33 82269.0 34 89658.0 35 97047.0 36 107147.5 37 117248.0 38 123329.5 39 129411.0 40 129411.0 41 136131.0 42 142851.0 43 154009.0 44 165167.0 45 191819.5 46 218472.0 47 218472.0 48 223107.5 49 227743.0 50 212148.5 51 196554.0 52 186525.0 53 176496.0 54 176496.0 55 158439.5 56 140383.0 57 123946.5 58 107510.0 59 96949.0 60 86388.0 61 86388.0 62 77527.0 63 68666.0 64 60829.5 65 52993.0 66 45732.0 67 38471.0 68 38471.0 69 32663.0 70 26855.0 71 22848.0 72 18841.0 73 14705.5 74 10570.0 75 10570.0 76 8189.5 77 5809.0 78 4632.0 79 3455.0 80 2832.0 81 2209.0 82 2209.0 83 1685.5 84 1162.0 85 984.0 86 806.0 87 679.0 88 552.0 89 552.0 90 452.5 91 353.0 92 208.5 93 64.0 94 50.0 95 36.0 96 36.0 97 21.0 98 6.0 99 3.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2551514.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.83767966856866 #Duplication Level Percentage of deduplicated Percentage of total 1 75.50680605387745 34.61056788694375 2 13.495110176353972 12.371690747115089 3 4.579847217556213 6.297887090679816 4 2.0431107545133784 3.746058251711674 5 1.1096364595991666 2.5431580291835614 6 0.6703398810152876 1.8436094841027109 7 0.4398625770861705 1.411359593466688 8 0.3116812428201117 1.1429395973671719 9 0.22423980265336854 0.9250769018671343 >10 1.3674763869692819 11.854073789363417 >50 0.14267050917556082 4.552814925622763 >100 0.09706170367517879 8.602673419179052 >500 0.007105989299361417 2.212123719230031 >1k 0.004280716445398252 3.4714123003005795 >5k 4.280716445398252E-4 1.212549427464868 >10k+ 3.4245731563186017E-4 3.202004836401741 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 25165 0.986277167203472 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 24299 0.9523365343086497 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 22050 0.8641927890656292 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 10079 0.3950203682989786 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8752 0.34301203128809016 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 5825 0.22829582749692928 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5601 0.21951672614769113 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 5369 0.21042408546455166 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 5351 0.20971862196327357 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 4371 0.17131005356035672 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 4259 0.16692050288573765 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3918 0.1535558887781921 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 3536 0.13858438558440206 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3393 0.1329798699909152 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3247 0.12725777714721534 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3191 0.12506300180990582 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2814 0.11028746069980412 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2560 0.10033258684843586 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 3.9192416737670265E-5 0.0 10 0.0 0.0 0.0 3.9192416737670265E-5 0.0 11 0.0 0.0 0.0 1.959620836883513E-4 0.0 12 0.0 7.838483347534053E-5 0.0 3.5273175063903233E-4 0.0 13 0.0 7.838483347534053E-5 0.0 5.486938343273837E-4 0.0 14 3.9192416737670265E-5 7.838483347534053E-5 0.0 7.446559180157349E-4 0.0 15 1.1757725021301078E-4 7.838483347534053E-5 0.0 0.0014893118360314699 0.0 16 1.1757725021301078E-4 7.838483347534053E-5 0.0 0.002547507087948567 0.0 17 1.1757725021301078E-4 1.1757725021301078E-4 0.0 0.0033705478394396426 0.0 18 1.1757725021301078E-4 1.1757725021301078E-4 0.0 0.0038408568402916858 0.0 19 1.1757725021301078E-4 1.1757725021301078E-4 0.0 0.004311165841143729 0.0 20 1.1757725021301078E-4 1.1757725021301078E-4 0.0 0.005330168676323155 0.0 21 1.1757725021301078E-4 1.1757725021301078E-4 0.0 0.007368174346682009 0.0 22 1.1757725021301078E-4 1.5676966695068106E-4 0.0 0.011757725021301079 0.0 23 1.1757725021301078E-4 1.959620836883513E-4 0.0 0.01904751453450775 0.0 24 1.1757725021301078E-4 1.959620836883513E-4 0.0 0.029276735303039685 0.0 25 1.1757725021301078E-4 1.959620836883513E-4 0.0 0.036723294483197035 0.0 26 1.1757725021301078E-4 1.959620836883513E-4 0.0 0.04585512758307421 0.0 27 1.1757725021301078E-4 1.959620836883513E-4 0.0 0.11354043128903075 0.0 28 1.1757725021301078E-4 1.959620836883513E-4 0.0 0.18647751883783512 0.0 29 1.1757725021301078E-4 1.959620836883513E-4 0.0 0.27344549157872544 0.0 30 1.1757725021301078E-4 1.959620836883513E-4 0.0 0.4235524476840025 0.0 31 1.1757725021301078E-4 1.959620836883513E-4 0.0 0.6406392439939581 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6760 0.0 25.943785 1 GTATTGG 860 0.0 18.5 1 TATACCG 145 2.9849616E-9 16.586205 5 GTATCAA 11140 0.0 15.759875 2 AACGGTA 95 7.065074E-5 15.578948 18 ATTGGAC 925 0.0 15.2 3 TACGTTA 150 8.1130565E-8 14.8 19 TAGTACT 400 0.0 14.8 4 TTATGCG 125 2.9619878E-6 14.799999 4 TAGTGCG 90 8.278891E-4 14.388889 7 TATTGGA 1235 0.0 14.23077 2 TAACGAA 250 0.0 14.059999 13 CGTCTGT 580 0.0 14.034481 34 ATTAGAC 240 5.456968E-12 13.875001 3 TGCGTTA 200 9.858923E-10 13.875001 37 CTTAACG 175 3.571222E-8 13.742858 30 TCTAACG 135 6.574017E-6 13.703704 2 ACGAACG 230 4.0017767E-11 13.673913 15 CGAACGA 225 4.0745363E-10 13.155556 16 ACGTTAA 170 3.7362224E-7 13.058824 20 >>END_MODULE