##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088402_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2868989 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.445994041803576 31.0 31.0 34.0 30.0 34.0 2 31.648157242847567 31.0 31.0 34.0 30.0 34.0 3 31.732542718009725 31.0 31.0 34.0 30.0 34.0 4 35.51174159259586 37.0 35.0 37.0 33.0 37.0 5 35.326981386125915 37.0 35.0 37.0 33.0 37.0 6 35.35830008410628 37.0 35.0 37.0 32.0 37.0 7 35.24642374020953 37.0 35.0 37.0 32.0 37.0 8 35.27184523886289 37.0 35.0 37.0 32.0 37.0 9 36.801203838704154 39.0 37.0 39.0 32.0 39.0 10 36.65626497696575 39.0 35.0 39.0 32.0 39.0 11 36.76223401344515 39.0 35.0 39.0 32.0 39.0 12 36.62803970318464 39.0 35.0 39.0 32.0 39.0 13 36.67160104134244 39.0 35.0 39.0 32.0 39.0 14 37.712448880075875 40.0 37.0 41.0 32.0 41.0 15 37.70943666915419 40.0 37.0 41.0 32.0 41.0 16 37.66586766278992 39.0 36.0 41.0 32.0 41.0 17 37.707154680620945 39.0 37.0 41.0 32.0 41.0 18 37.6823710373236 39.0 37.0 41.0 32.0 41.0 19 37.74020604470773 40.0 37.0 41.0 32.0 41.0 20 37.695624835089994 40.0 37.0 41.0 32.0 41.0 21 37.65432108662668 39.0 37.0 41.0 32.0 41.0 22 37.55370027560231 39.0 36.0 41.0 32.0 41.0 23 37.45529243925299 39.0 36.0 41.0 32.0 41.0 24 37.39051352235927 39.0 36.0 41.0 31.0 41.0 25 37.326560331879975 39.0 36.0 41.0 31.0 41.0 26 37.11273204602736 39.0 36.0 41.0 31.0 41.0 27 36.95805142508389 39.0 36.0 40.0 31.0 41.0 28 36.86744041193605 39.0 35.0 40.0 31.0 41.0 29 36.727322760735575 39.0 35.0 40.0 30.0 41.0 30 36.56296521178715 38.0 35.0 40.0 30.0 41.0 31 36.3509894949057 38.0 35.0 40.0 30.0 41.0 32 36.21607053913417 38.0 35.0 40.0 30.0 41.0 33 36.3072775810573 38.0 35.0 40.0 30.0 41.0 34 36.29397184861985 38.0 35.0 40.0 30.0 41.0 35 36.23932507235127 38.0 35.0 40.0 30.0 41.0 36 36.164601537335976 38.0 35.0 40.0 30.0 41.0 37 36.054112790254685 38.0 35.0 40.0 29.0 41.0 38 35.9634658759584 38.0 35.0 40.0 29.0 41.0 39 35.92734688073046 38.0 35.0 40.0 28.0 41.0 40 35.81052942343104 38.0 35.0 40.0 27.0 41.0 41 35.69713895731214 38.0 35.0 40.0 27.0 41.0 42 35.56141309708751 38.0 35.0 40.0 26.0 41.0 43 35.24233832893748 38.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 3.0 14 1.0 15 8.0 16 22.0 17 57.0 18 137.0 19 364.0 20 745.0 21 1518.0 22 2930.0 23 5047.0 24 8440.0 25 13381.0 26 20512.0 27 30817.0 28 42834.0 29 59158.0 30 76842.0 31 96829.0 32 118160.0 33 145720.0 34 180415.0 35 221856.0 36 282632.0 37 384865.0 38 526872.0 39 648823.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.14867641528078 22.023332958055956 13.204268123718844 23.623722502944418 2 17.95161989118815 22.937348313290848 35.60905949796253 23.501972297558478 3 19.588050006465693 26.02672927641061 31.610717224778483 22.774503492345215 4 13.261152273501223 16.382809414745054 36.26483057272091 34.09120773903281 5 12.276763696200996 39.322946166750725 34.8131693777843 13.587120759263977 6 31.442818358662233 36.97738123080988 16.01156365535037 15.56823675517752 7 25.36823947390527 33.833939412106496 22.434592813008344 18.36322830097989 8 27.00651692983138 33.86520478119644 20.64159186389352 18.48668642507866 9 25.800796029542113 13.780429273169052 22.56760133970538 37.851173357583455 10 15.928468181648658 27.617533563216867 34.41212217962495 22.041876075509524 11 32.557671012332214 22.371818086440904 24.295561955796973 20.774948945429905 12 20.153615088799572 27.04116328086305 31.776559617342553 21.028662012994822 13 30.17184799244612 21.413571122092137 27.702232389179603 20.71234849628214 14 21.137759677712253 22.159269345403555 28.02192688783401 28.681044089050182 15 23.218910912520055 29.07215747428798 25.817317528927436 21.89161408426453 16 22.272375390773544 28.144478769350457 26.7242920764074 22.858853763468595 17 20.343159210439634 27.13903747975332 27.848729988159594 24.66907332164745 18 21.17780862875389 26.70250739894785 30.71060920763377 21.40907476466449 19 20.881327882400385 25.581311047201645 31.72769222886529 21.809668841532677 20 23.66011162817285 25.040040237170658 30.71043493021409 20.5894132044424 21 23.149792487876393 25.6854940886842 29.938595093951214 21.22611832948819 22 22.186526333840945 25.426796686916543 30.751668967709534 21.63500801153298 23 21.644453847679443 26.448166932672102 31.26028018929316 20.647099030355292 24 20.799034084829184 25.971587900824993 30.2312068815879 22.998171132757918 25 21.65989482706277 26.486995941776005 30.782655492927997 21.070453738233226 26 22.390849180669566 25.987307724079805 29.932042262971382 21.689800832279246 27 21.500884109350018 26.88626551025466 29.782163682049667 21.830686698345655 28 21.409771874343193 26.566431589664514 29.870940599632835 22.152855936359465 29 20.6514559658472 26.46318964624821 30.691368980501494 22.193985407403098 30 20.570521532149478 26.75329183904156 31.452996159971335 21.22319046883763 31 21.290810107672076 26.417807806164472 30.82768877817238 21.463693307991072 32 21.789626938269894 26.58323193292132 29.78941362270821 21.83772750610058 33 22.47746505824874 26.359634003476483 29.48230195375444 21.68059898452033 34 21.432044528577837 27.877590328858005 29.68990121607298 21.00046392649118 35 20.8398498565174 28.42760986535675 29.68648537864732 21.046054899478527 36 21.396526790447783 26.24715535681733 30.82793276655993 21.528385086174957 37 21.340688305183463 26.421816186817026 30.251701906141847 21.985793601857658 38 21.427339038246572 26.220769755478322 30.662682917222757 21.689208289052345 39 21.94410644307106 25.744574133954508 30.861777441461086 21.44954198151335 40 20.945078562518017 26.089190303622633 30.402277596742266 22.56345353711708 41 21.541107337811333 25.630736123421876 30.389346212202277 22.438810326564514 42 19.74214610094357 26.843950952757222 30.788406647777318 22.62549629852188 43 20.28861037808092 26.438023986846936 30.541560110547657 22.731805524524493 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 306.0 1 423.0 2 540.0 3 1313.5 4 2087.0 5 2087.0 6 3383.0 7 4679.0 8 4853.5 9 5028.0 10 7310.5 11 9593.0 12 9593.0 13 17160.0 14 24727.0 15 40067.5 16 55408.0 17 55243.0 18 55078.0 19 55078.0 20 60244.5 21 65411.0 22 56242.0 23 47073.0 24 53596.5 25 60120.0 26 60120.0 27 68098.0 28 76076.0 29 81101.0 30 86126.0 31 94193.5 32 102261.0 33 102261.0 34 111074.5 35 119888.0 36 128625.5 37 137363.0 38 143893.5 39 150424.0 40 150424.0 41 155831.0 42 161238.0 43 174228.5 44 187219.0 45 216396.5 46 245574.0 47 245574.0 48 247773.0 49 249972.0 50 232157.0 51 214342.0 52 204098.0 53 193854.0 54 193854.0 55 174600.0 56 155346.0 57 136484.5 58 117623.0 59 106115.5 60 94608.0 61 94608.0 62 84069.5 63 73531.0 64 64283.0 65 55035.0 66 47586.5 67 40138.0 68 40138.0 69 34421.0 70 28704.0 71 24835.0 72 20966.0 73 16811.0 74 12656.0 75 12656.0 76 9992.0 77 7328.0 78 5585.5 79 3843.0 80 3102.5 81 2362.0 82 2362.0 83 1746.5 84 1131.0 85 897.5 86 664.0 87 519.5 88 375.0 89 375.0 90 296.5 91 218.0 92 134.5 93 51.0 94 34.0 95 17.0 96 17.0 97 10.5 98 4.0 99 3.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2868989.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.81992408123501 #Duplication Level Percentage of deduplicated Percentage of total 1 71.68751153034741 30.696538013021353 2 14.35264979719491 12.291587493608782 3 5.5789545045938835 7.1667122501812255 4 2.7274925279927813 4.671640919231466 5 1.471873731153969 3.1512760712588532 6 0.90666926267697 2.3294105396770304 7 0.5984054301973556 1.7936572563594675 8 0.4239512093039878 1.4522846877235625 9 0.30777709112774115 1.1861092508429902 >10 1.671820939940648 13.568656013635657 >50 0.16720813776218982 4.98189290601388 >100 0.09550944421626319 7.310079315399665 >500 0.0048032577281478675 1.411907485823939 >1k 0.004559024284325912 3.5465713269677623 >5k 4.884668876063477E-4 1.3284173266044852 >10k+ 3.256445917375651E-4 3.1132591436499006 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 27528 0.9595017617704356 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 25843 0.9007702713394858 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 23730 0.8271206337842354 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 12206 0.4254460369140488 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8774 0.30582201604816195 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 6376 0.22223856557135632 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6161 0.21474463652527073 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 5939 0.20700671909163823 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5787 0.2017086855334754 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 5070 0.17671730355187837 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 4762 0.16598181449981161 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 4362 0.15203962092569892 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 4246 0.14799638478920624 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3650 0.12722251636377832 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3613 0.1259328634581729 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3564 0.1242249447453441 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3247 0.11317575633785978 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3022 0.1053332724524214 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2880 0.10038379373361139 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 3.485548393528173E-5 0.0 0.0 0.0 0.0 7 3.485548393528173E-5 0.0 0.0 0.0 0.0 8 3.485548393528173E-5 0.0 0.0 0.0 0.0 9 3.485548393528173E-5 0.0 0.0 0.0 0.0 10 3.485548393528173E-5 0.0 0.0 3.485548393528173E-5 0.0 11 3.485548393528173E-5 0.0 0.0 3.485548393528173E-5 0.0 12 3.485548393528173E-5 0.0 0.0 1.0456645180584519E-4 0.0 13 3.485548393528173E-5 0.0 0.0 1.3942193574112692E-4 0.0 14 3.485548393528173E-5 0.0 0.0 2.0913290361169039E-4 0.0 15 3.485548393528173E-5 0.0 0.0 4.8797677509394426E-4 0.0 16 3.485548393528173E-5 0.0 0.0 7.319651626409164E-4 0.0 17 3.485548393528173E-5 0.0 0.0 0.001150230969864297 0.0 18 3.485548393528173E-5 0.0 0.0 0.001429074841346551 0.0 19 3.485548393528173E-5 0.0 0.0 0.0017427741967640867 0.0 20 3.485548393528173E-5 0.0 0.0 0.0020216180682463406 0.0 21 3.485548393528173E-5 0.0 0.0 0.002858149682693102 0.0 22 3.485548393528173E-5 0.0 0.0 0.0055420219457097955 0.0 23 3.485548393528173E-5 0.0 0.0 0.009201847758914377 0.0 24 3.485548393528173E-5 0.0 0.0 0.015127280027912271 0.0 25 3.485548393528173E-5 0.0 0.0 0.019553926487693052 0.0 26 3.485548393528173E-5 0.0 0.0 0.02819808650364292 0.0 27 3.485548393528173E-5 0.0 0.0 0.08665073306311039 0.0 28 3.485548393528173E-5 0.0 0.0 0.1432560389740079 0.0 29 3.485548393528173E-5 0.0 0.0 0.20916775909562568 0.0 30 3.485548393528173E-5 0.0 0.0 0.3152678521946233 0.0 31 3.485548393528173E-5 0.0 0.0 0.47713671959007165 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6100 0.0 29.32705 1 ATTGGAC 735 0.0 19.129251 3 GTATTGG 775 0.0 18.380646 1 GTATCAA 10455 0.0 17.128647 2 TTGGACC 1230 0.0 16.093496 4 CGTATAC 180 2.0190782E-10 15.416667 3 CAATGCG 170 1.4897523E-9 15.235294 19 GGACCCT 1235 0.0 14.829959 6 ACCGTGT 225 1.8189894E-12 14.8 8 TATACTG 520 0.0 14.586538 5 ACGTTTA 155 1.2120472E-7 14.322581 26 CCCGTAT 130 4.449257E-6 14.230769 1 GCACCGT 275 0.0 14.127274 6 TGCGACG 175 3.5717676E-8 13.742857 22 CCGTGCA 135 6.574701E-6 13.703704 9 TGGACCC 1365 0.0 13.688644 5 GACCCTC 1375 0.0 13.589091 7 AATGCGT 220 2.8558134E-10 13.454545 35 ATCACGT 180 5.167385E-8 13.361112 23 CGTAGAC 140 9.569934E-6 13.214285 3 >>END_MODULE