##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088401_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4233567 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.425682409183555 31.0 31.0 34.0 30.0 34.0 2 31.62645990957507 31.0 31.0 34.0 30.0 34.0 3 31.714088616053555 31.0 31.0 34.0 30.0 34.0 4 35.495386278284954 37.0 35.0 37.0 33.0 37.0 5 35.30774616298738 37.0 35.0 37.0 33.0 37.0 6 35.33850934684629 37.0 35.0 37.0 32.0 37.0 7 35.22376875103193 37.0 35.0 37.0 32.0 37.0 8 35.24939276973767 37.0 35.0 37.0 32.0 37.0 9 36.77692522641073 39.0 37.0 39.0 32.0 39.0 10 36.628650497322944 39.0 35.0 39.0 32.0 39.0 11 36.73457795754738 39.0 35.0 39.0 32.0 39.0 12 36.60488921044594 39.0 35.0 39.0 32.0 39.0 13 36.647894080807035 39.0 35.0 39.0 32.0 39.0 14 37.691228932954175 39.0 37.0 41.0 32.0 41.0 15 37.68578954815171 39.0 36.0 41.0 32.0 41.0 16 37.64490062398918 39.0 36.0 41.0 32.0 41.0 17 37.67840405029612 39.0 37.0 41.0 32.0 41.0 18 37.65522147163373 39.0 36.0 41.0 32.0 41.0 19 37.70370871655037 40.0 37.0 41.0 32.0 41.0 20 37.66369612196996 39.0 37.0 41.0 32.0 41.0 21 37.6174665477126 39.0 37.0 41.0 32.0 41.0 22 37.50831060427294 39.0 36.0 41.0 32.0 41.0 23 37.42174128813835 39.0 36.0 41.0 32.0 41.0 24 37.35501741203104 39.0 36.0 41.0 31.0 41.0 25 37.29332333703471 39.0 36.0 41.0 31.0 41.0 26 37.08707361900733 39.0 36.0 41.0 31.0 41.0 27 36.93318022367427 39.0 36.0 40.0 31.0 41.0 28 36.84246593947846 39.0 35.0 40.0 30.0 41.0 29 36.710363624810945 39.0 35.0 40.0 30.0 41.0 30 36.54672620038847 38.0 35.0 40.0 30.0 41.0 31 36.348192906832466 38.0 35.0 40.0 30.0 41.0 32 36.219144990500915 38.0 35.0 40.0 30.0 41.0 33 36.31656709342264 38.0 35.0 40.0 30.0 41.0 34 36.313599147007714 38.0 35.0 40.0 30.0 41.0 35 36.25968574490495 38.0 35.0 40.0 30.0 41.0 36 36.19045027514623 38.0 35.0 40.0 30.0 41.0 37 36.08711495530837 38.0 35.0 40.0 29.0 41.0 38 36.00207957025364 38.0 35.0 40.0 29.0 41.0 39 35.97287937098905 38.0 35.0 40.0 28.0 41.0 40 35.85665775456016 38.0 35.0 40.0 28.0 41.0 41 35.75619282746677 38.0 35.0 40.0 27.0 41.0 42 35.640935173578214 38.0 35.0 40.0 27.0 41.0 43 35.322647072787554 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 3.0 15 9.0 16 29.0 17 83.0 18 206.0 19 546.0 20 1145.0 21 2243.0 22 4272.0 23 7441.0 24 12470.0 25 20063.0 26 30928.0 27 45292.0 28 64321.0 29 87204.0 30 114664.0 31 141525.0 32 175975.0 33 216122.0 34 266715.0 35 328251.0 36 417520.0 37 560418.0 38 774005.0 39 962116.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.1072506942727 21.974377634746304 13.186492619580603 23.73187905140039 2 17.946639323294043 22.90510578904267 35.85685546018287 23.29139942748042 3 19.47988540160106 25.887744306396947 31.647190182652125 22.98518010934987 4 13.241221882162252 16.351034482269917 36.39158185048211 34.01616178508572 5 12.309501656640842 39.282642745467356 34.97341603428031 13.43443956361149 6 31.592177471149036 37.112675906629086 16.033240999847173 15.261905622374702 7 25.455248493764245 33.82261341322813 22.44993406269465 18.27220403031297 8 26.7920408487689 34.08055193173983 20.683409522041345 18.44399769744993 9 25.75475952075401 13.867573136317437 22.47605860495417 37.901608737974385 10 15.866218722887815 27.50841075622519 34.72206770319213 21.90330281769487 11 32.61077479109224 22.367025253173033 24.32126384205092 20.700936113683806 12 20.078127971046637 26.94545757749907 31.928796686104178 21.047617765350118 13 30.137186915903303 21.33279100106364 27.596067335180948 20.933954747852106 14 21.0160132106094 22.264086053202888 28.023791757636058 28.696108978551653 15 23.157044638717185 29.229843297625855 25.701329399062306 21.911782664594657 16 22.3113747815967 28.303461360124928 26.629766341243684 22.75539751703469 17 20.411393040431392 27.320980156922047 27.827219930616426 24.440406872030135 18 21.168650454805604 26.836825778356644 30.617821803694145 21.37670196314361 19 20.89252396383475 25.85663578726875 31.50903245419288 21.741807794703615 20 23.586233547266406 25.255936660504013 30.55307734588823 20.604752446341347 21 23.203908193728832 25.878154284554846 29.671622062435766 21.246315459280556 22 22.328476199857 25.593500705197297 30.348639811298604 21.7293832836471 23 21.66527658591443 26.62374305166305 30.844817148281816 20.866163214140702 24 20.895240349331896 26.267046204772477 29.967141183781905 22.87057226211372 25 21.67696885392389 26.682936634757404 30.544101463375917 21.095993047942788 26 22.251330851738025 26.31218544551202 29.703840756506274 21.732642946243676 27 21.528559722805852 27.03635019830795 29.565753890277396 21.869336188608802 28 21.360852444286344 26.75679869953635 29.721438210379098 22.16091064579821 29 20.761712286589535 26.690944066788123 30.386976277923555 22.160367368698783 30 20.519694149165467 26.942221535645945 31.26595138331341 21.27213293187518 31 21.38383542766655 26.56910827205522 30.61732576808162 21.429730532196608 32 21.850746663510936 26.709911523781248 29.54267642392337 21.896665388784445 33 22.33969605299739 26.600405757131046 29.29248550926441 21.76741268060716 34 21.54211802954813 27.866005191366995 29.44098912335626 21.15088765572861 35 20.734666535335332 28.467200353744254 29.66118169382934 21.136951417091073 36 21.183011866825304 26.46867287089114 30.734272068919662 21.614043193363894 37 21.301635240448537 26.476562199204594 30.28070655312648 21.94109600722039 38 21.318453209787396 26.258967910511394 30.71634392463849 21.706234955062715 39 21.853274083060455 25.791773225745573 30.866146679620282 21.48880601157369 40 20.83290520735824 26.130801756532968 30.561769779479103 22.474523256629695 41 21.216364356581575 25.685881432843743 30.567391516421022 22.530362694153652 42 19.758846381786327 26.85454133594673 30.7342012066893 22.65241107557764 43 20.138856902465463 26.510906760185915 30.613924381024322 22.7363119563243 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 431.0 1 604.0 2 777.0 3 1962.0 4 3147.0 5 3147.0 6 5017.0 7 6887.0 8 7218.5 9 7550.0 10 10919.0 11 14288.0 12 14288.0 13 25088.0 14 35888.0 15 56923.5 16 77959.0 17 77824.5 18 77690.0 19 77690.0 20 85634.0 21 93578.0 22 82436.0 23 71294.0 24 80760.0 25 90226.0 26 90226.0 27 101489.5 28 112753.0 29 120997.0 30 129241.0 31 141422.0 32 153603.0 33 153603.0 34 167169.0 35 180735.0 36 194181.0 37 207627.0 38 216749.0 39 225871.0 40 225871.0 41 235665.5 42 245460.0 43 262213.5 44 278967.0 45 318619.5 46 358272.0 47 358272.0 48 361316.5 49 364361.0 50 337179.0 51 309997.0 52 295011.0 53 280025.0 54 280025.0 55 254581.0 56 229137.0 57 202449.5 58 175762.0 59 158707.0 60 141652.0 61 141652.0 62 124905.5 63 108159.0 64 94358.0 65 80557.0 66 68986.5 67 57416.0 68 57416.0 69 49330.0 70 41244.0 71 35754.5 72 30265.0 73 24298.5 74 18332.0 75 18332.0 76 14517.0 77 10702.0 78 8341.0 79 5980.0 80 4934.0 81 3888.0 82 3888.0 83 2828.0 84 1768.0 85 1380.5 86 993.0 87 821.5 88 650.0 89 650.0 90 494.5 91 339.0 92 198.0 93 57.0 94 41.5 95 26.0 96 26.0 97 19.0 98 12.0 99 6.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4233567.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.79371977344156 #Duplication Level Percentage of deduplicated Percentage of total 1 70.98032612790247 30.375121857449507 2 14.606849158911164 12.5016281935875 3 5.76800606607349 7.405033057291799 4 2.760221678456504 4.724806120817846 5 1.5723431052832062 3.364320511759622 6 0.9786644078428177 2.512841425288 7 0.6476174564209366 1.9399771965326595 8 0.4476037466989793 1.532370344462291 9 0.321667001279824 1.238879476181885 >10 1.6709532255663146 13.270465310657015 >50 0.14314788307910098 4.2426229109566265 >100 0.09272882426307677 7.454059170697651 >500 0.004852938616122988 1.38743616259165 >1k 0.0042463212049960305 3.419208471747158 >5k 4.963232577268082E-4 1.4919345713868475 >10k+ 2.757351431815601E-4 3.139295218591943 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 37133 0.8771090666570294 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 35326 0.8344263832366419 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 32064 0.7573755180914817 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 15908 0.37575878685751285 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12593 0.2974560223093198 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8595 0.20302028998241908 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 8195 0.19357199260103833 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 8103 0.19139888420332074 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 8047 0.19007612256992742 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 6555 0.1548339733373772 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 6516 0.15391276434269258 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 6059 0.14311808458446507 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 6011 0.14198428889869938 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5138 0.12136337986383586 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4767 0.11260008404260521 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4592 0.10846645393825112 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4571 0.10797041832572864 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4293 0.10140385164566901 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 2.36207434534519E-5 0.0 3 0.0 0.0 0.0 2.36207434534519E-5 0.0 4 0.0 0.0 0.0 4.72414869069038E-5 0.0 5 0.0 0.0 0.0 4.72414869069038E-5 0.0 6 0.0 0.0 0.0 4.72414869069038E-5 0.0 7 0.0 0.0 0.0 4.72414869069038E-5 0.0 8 0.0 0.0 0.0 4.72414869069038E-5 0.0 9 0.0 0.0 0.0 7.08622303603557E-5 0.0 10 0.0 0.0 0.0 1.417244607207114E-4 0.0 11 0.0 0.0 0.0 1.889659476276152E-4 0.0 12 0.0 0.0 0.0 3.306904083483266E-4 0.0 13 0.0 0.0 0.0 3.543111518017785E-4 0.0 14 0.0 0.0 0.0 4.487941256155861E-4 0.0 15 0.0 0.0 0.0 5.668978428828456E-4 0.0 16 0.0 0.0 0.0 9.212089946846241E-4 0.0 17 0.0 0.0 0.0 0.0013700031203002102 0.0 18 0.0 0.0 0.0 0.0016062105548347292 0.0 19 0.0 0.0 0.0 0.0020313839369968632 0.0 20 0.0 0.0 0.0 0.0027163854971469685 0.0 21 0.0 0.0 0.0 0.0036612152352850447 0.0 22 0.0 0.0 0.0 0.005928806606816427 0.0 23 0.0 0.0 0.0 0.009849850020089443 0.0 24 0.0 0.0 0.0 0.01613296777870765 0.0 25 0.0 0.0 0.0 0.020691771265223865 0.0 26 0.0 0.0 0.0 0.02893541073047858 0.0 27 0.0 0.0 0.0 0.09228624467263657 0.0 28 0.0 0.0 0.0 0.15636932166185158 0.0 29 0.0 0.0 0.0 0.22789293283890394 0.0 30 0.0 0.0 0.0 0.34932717493310017 0.0 31 0.0 0.0 0.0 0.5427810638168712 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8205 0.0 29.2663 1 GTATCAA 14160 0.0 16.932203 2 TTGGACC 1405 0.0 16.72242 4 GTATTGG 970 0.0 16.592783 1 ACGAACG 195 1.8189894E-12 16.128204 15 ATTGGAC 870 0.0 15.948275 3 GGACCCT 1625 0.0 15.36923 6 ATTAACG 110 1.4536203E-5 15.136364 3 GCGCTAT 155 1.2125201E-7 14.322581 19 TCCGATA 240 5.456968E-12 13.875001 8 CCGATAA 230 4.0017767E-11 13.673913 9 GACCCTC 1655 0.0 13.4138975 7 TATTGGA 1285 0.0 13.245136 2 TGGACCC 1800 0.0 13.155556 5 CTGTGCG 430 0.0 12.906977 9 CGAACGA 245 1.1459633E-10 12.836734 16 ACGGTGT 305 0.0 12.737704 29 CTAATAC 575 0.0 12.547826 3 TATCAAC 21250 0.0 12.336236 1 TGTGCGC 420 0.0 12.333333 10 >>END_MODULE