##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088399_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 725578 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.35141914446138 31.0 31.0 34.0 30.0 34.0 2 31.588767851285457 31.0 31.0 34.0 30.0 34.0 3 31.686069588658974 31.0 31.0 34.0 30.0 34.0 4 35.47429359765594 37.0 35.0 37.0 33.0 37.0 5 35.27847454029753 37.0 35.0 37.0 33.0 37.0 6 35.31464845957292 37.0 35.0 37.0 32.0 37.0 7 35.19418725485062 37.0 35.0 37.0 32.0 37.0 8 35.20260123653143 37.0 35.0 37.0 32.0 37.0 9 36.71211778747426 39.0 35.0 39.0 32.0 39.0 10 36.59029904434809 39.0 35.0 39.0 32.0 39.0 11 36.70212988817191 39.0 35.0 39.0 32.0 39.0 12 36.56193958471729 39.0 35.0 39.0 32.0 39.0 13 36.60173957865316 39.0 35.0 39.0 32.0 39.0 14 37.60932112054114 39.0 36.0 41.0 32.0 41.0 15 37.60962294887662 39.0 36.0 41.0 32.0 41.0 16 37.574533682112744 39.0 36.0 41.0 32.0 41.0 17 37.60622703554959 39.0 36.0 41.0 32.0 41.0 18 37.57815562213849 39.0 36.0 41.0 32.0 41.0 19 37.65068676282908 39.0 37.0 41.0 32.0 41.0 20 37.61400152705843 39.0 36.0 41.0 32.0 41.0 21 37.550718186053054 39.0 36.0 41.0 32.0 41.0 22 37.44771892201803 39.0 36.0 41.0 32.0 41.0 23 37.35769276356229 39.0 36.0 41.0 31.0 41.0 24 37.283691071118476 39.0 36.0 41.0 31.0 41.0 25 37.21812265531755 39.0 36.0 41.0 31.0 41.0 26 36.99656411853722 39.0 36.0 41.0 31.0 41.0 27 36.8425985903652 39.0 35.0 40.0 30.0 41.0 28 36.751861274735454 39.0 35.0 40.0 30.0 41.0 29 36.61947578344437 39.0 35.0 40.0 30.0 41.0 30 36.44305229761652 38.0 35.0 40.0 30.0 41.0 31 36.206919173403826 38.0 35.0 40.0 30.0 41.0 32 36.0543580428293 38.0 35.0 40.0 30.0 41.0 33 36.142799257970886 38.0 35.0 40.0 30.0 41.0 34 36.08963750279088 38.0 35.0 40.0 30.0 41.0 35 36.05482525655408 38.0 35.0 40.0 30.0 41.0 36 35.98812670725959 38.0 35.0 40.0 29.0 41.0 37 35.87898475422353 38.0 35.0 40.0 29.0 41.0 38 35.7618739818462 38.0 35.0 40.0 28.0 41.0 39 35.72089837343469 38.0 35.0 40.0 27.0 41.0 40 35.56649457398102 38.0 34.0 40.0 27.0 41.0 41 35.44356361411178 38.0 34.0 40.0 26.0 41.0 42 35.32295769717384 38.0 34.0 40.0 25.0 41.0 43 34.98279165024298 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 0.0 16 4.0 17 13.0 18 31.0 19 89.0 20 213.0 21 421.0 22 771.0 23 1366.0 24 2193.0 25 3649.0 26 5616.0 27 8182.0 28 11789.0 29 15845.0 30 20433.0 31 25377.0 32 31129.0 33 38223.0 34 47392.0 35 57423.0 36 72793.0 37 98365.0 38 130780.0 39 153480.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.231266659132444 21.92913787352979 13.333645727957574 23.505949739380192 2 17.9812508096993 22.730154442389377 35.93976112836938 23.348833619541935 3 19.595412209300722 25.76097952253238 31.58599075495674 23.057617513210158 4 13.284994859270816 16.26510175336077 35.84480235067767 34.60510103669075 5 12.315836477952748 39.3698541025224 34.561273908525344 13.753035510999506 6 31.756337705939263 36.60447257221139 15.992078039852368 15.647111681996972 7 25.50945590963342 33.87561364870489 22.255774017404057 18.359156424257623 8 27.16069120067036 33.82572238959836 20.497176044477644 18.516410365253634 9 25.91106676332524 13.809542185678175 22.581583234331802 37.697807816664785 10 16.349034838432257 27.50676012778778 33.95789287988335 22.18631215389662 11 32.483757776558825 22.381742555590165 24.184029835524232 20.950469832326778 12 20.405524974571996 27.089851125585398 31.599772870732025 20.904851029110585 13 30.474187475364467 21.186833117872926 27.46059003994057 20.878389366822038 14 21.089669201657163 22.250536813409447 28.077064078569087 28.582729906364307 15 23.364545231525764 28.9037153827707 25.76869750736654 21.963041878336995 16 22.263216359922712 28.05280755480458 26.79257088831249 22.891405196960214 17 20.495246548269105 27.240489651009263 27.692680869596376 24.571582931125256 18 21.259327046850924 26.618502766070634 30.74955414855467 21.37261603852377 19 20.961771167262512 25.603312118063116 31.79561673589883 21.639299978775544 20 23.75940284848769 24.96065205946156 30.777256201262993 20.502688890787756 21 23.303352637483496 25.603312118063116 29.91987077888249 21.173464465570895 22 22.398005452205 25.341727560648202 30.52352744983999 21.73673953730681 23 21.591200394719795 26.417421696909223 31.02698813911116 20.964389769259817 24 20.79252678554201 26.168103222534313 30.203506721537863 22.83586327038582 25 21.643848076981385 26.580601947688603 30.741147057931745 21.034402917398268 26 22.41537091808186 26.00189090628437 29.917803461516197 21.664934714117575 27 21.590097825457775 26.846458960993857 29.713276863410965 21.850166350137407 28 21.326445950676565 26.654336267086375 29.827117139714822 22.192100642522234 29 20.63651323496578 26.70216020882662 30.57080010694922 22.090526449258384 30 20.456932266413812 27.035825231746273 31.454647191618267 21.052595310221644 31 21.30356763848959 26.50025221271869 30.7897979266185 21.40638222217322 32 21.787595544517615 26.67087480601672 29.617766801088237 21.923762848377432 33 22.324271132807226 26.48839959315194 29.443009573057616 21.744319700983215 34 21.383503909986246 28.022624721256705 29.595991058163285 20.99788031059376 35 20.587586723963515 28.429197136627625 29.74745651053367 21.235759628875186 36 21.04708246391153 26.428447389529452 30.889993908304824 21.63447623825419 37 21.164506090316962 26.40474215039596 30.454616870963562 21.976134888323514 38 21.22101276499563 26.251071559501526 30.77229463958389 21.755621035918953 39 21.76816276127446 25.83581641119218 30.963314764229345 21.432706063304014 40 20.724443133612098 26.08348103167406 30.629787562467442 22.562288272246402 41 21.164230448001454 25.619575014677952 30.718544388060277 22.497650149260316 42 19.607953934656233 26.991033355476603 30.790073568934005 22.61093914093316 43 19.995507030257258 26.54973000835196 30.578655912941134 22.87610704844965 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 65.0 1 98.5 2 132.0 3 346.5 4 561.0 5 561.0 6 936.0 7 1311.0 8 1393.5 9 1476.0 10 2165.0 11 2854.0 12 2854.0 13 4844.0 14 6834.0 15 10859.5 16 14885.0 17 14842.0 18 14799.0 19 14799.0 20 15798.5 21 16798.0 22 14336.0 23 11874.0 24 13426.0 25 14978.0 26 14978.0 27 16683.0 28 18388.0 29 19611.0 30 20834.0 31 22736.5 32 24639.0 33 24639.0 34 26763.5 35 28888.0 36 31518.5 37 34149.0 38 35690.5 39 37232.0 40 37232.0 41 38764.0 42 40296.0 43 43667.5 44 47039.0 45 54859.0 46 62679.0 47 62679.0 48 63583.0 49 64487.0 50 59290.0 51 54093.0 52 51115.5 53 48138.0 54 48138.0 55 43492.0 56 38846.0 57 34705.5 58 30565.0 59 27562.0 60 24559.0 61 24559.0 62 21847.5 63 19136.0 64 16938.5 65 14741.0 66 12638.5 67 10536.0 68 10536.0 69 8985.0 70 7434.0 71 6260.0 72 5086.0 73 4136.0 74 3186.0 75 3186.0 76 2518.5 77 1851.0 78 1432.5 79 1014.0 80 781.0 81 548.0 82 548.0 83 414.0 84 280.0 85 232.5 86 185.0 87 145.5 88 106.0 89 106.0 90 82.5 91 59.0 92 34.5 93 10.0 94 8.0 95 6.0 96 6.0 97 3.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 725578.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.60804011809009 #Duplication Level Percentage of deduplicated Percentage of total 1 84.1184470075517 51.823726579126806 2 9.623013844609602 11.857100459912894 3 2.5825046078200797 4.77309142451196 4 1.1031075294720831 2.7184117172113336 5 0.6229936116053366 1.9190707708547707 6 0.3771102666045253 1.3939814660349148 7 0.2607876872862439 1.1246632810444392 8 0.1998497184393183 0.9849879576958825 9 0.1478028009906832 0.8195256803700085 >10 0.8652449443448621 9.914355079891461 >50 0.06145672211424547 2.6354324187019498 >100 0.03207392892956458 3.9778639558879307 >500 0.0026915185112828493 1.1264649656647208 >1k 0.002242932092735708 2.1472202038106105 >5k 6.728796278207123E-4 2.784104039280274 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7095 0.9778411142564962 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6825 0.9406294016632257 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6228 0.8583501704847722 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2790 0.38452103013046146 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2318 0.31946944367111463 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 1525 0.21017726557310173 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 1506 0.2075586635757975 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1448 0.19956503642613196 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1313 0.18095918012949677 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 1213 0.1671770643542114 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 1167 0.16083729109758013 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 1163 0.16028600646656874 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 1096 0.15105198889712754 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 872 0.12018004956048833 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 864 0.1190774802984655 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 823 0.11342681283059851 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 798 0.10998128388677716 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 789 0.10874089346700147 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.3782115775285358E-4 0.0 3 0.0 0.0 0.0 1.3782115775285358E-4 0.0 4 0.0 0.0 0.0 1.3782115775285358E-4 0.0 5 0.0 0.0 0.0 1.3782115775285358E-4 0.0 6 0.0 0.0 0.0 1.3782115775285358E-4 0.0 7 0.0 0.0 0.0 1.3782115775285358E-4 0.0 8 0.0 0.0 0.0 1.3782115775285358E-4 0.0 9 0.0 0.0 0.0 1.3782115775285358E-4 0.0 10 0.0 0.0 0.0 1.3782115775285358E-4 0.0 11 0.0 0.0 0.0 1.3782115775285358E-4 0.0 12 0.0 0.0 0.0 4.1346347325856074E-4 0.0 13 0.0 0.0 0.0 5.512846310114143E-4 0.0 14 0.0 0.0 0.0 8.269269465171215E-4 0.0 15 0.0 0.0 0.0 0.0012403904197756824 0.0 16 1.3782115775285358E-4 0.0 0.0 0.0028942443128099253 0.0 17 1.3782115775285358E-4 0.0 0.0 0.0042724558903384615 0.0 18 1.3782115775285358E-4 0.0 0.0 0.0045480982058441685 0.0 19 1.3782115775285358E-4 0.0 0.0 0.005237203994608437 0.0 20 1.3782115775285358E-4 0.0 0.0 0.006339773256631265 0.0 21 1.3782115775285358E-4 0.0 0.0 0.008269269465171215 0.0 22 1.3782115775285358E-4 0.0 0.0 0.011990440724498262 0.0 23 1.3782115775285358E-4 0.0 0.0 0.018743677454388086 0.0 24 1.3782115775285358E-4 0.0 0.0 0.026461662288547887 0.0 25 1.3782115775285358E-4 0.0 0.0 0.03156104512540347 0.0 26 1.3782115775285358E-4 0.0 0.0 0.0403815992215861 0.0 27 1.3782115775285358E-4 0.0 0.0 0.09730173737351464 0.0 28 1.3782115775285358E-4 0.0 0.0 0.16166421804409725 0.0 29 1.3782115775285358E-4 0.0 0.0 0.24187613185625806 0.0 30 1.3782115775285358E-4 0.0 0.0 0.37790561455832455 0.0 31 1.3782115775285358E-4 0.0 0.0 0.6015893535912059 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTACA 25 0.005495025 29.599998 2 GGTCTAT 45 1.3225556E-4 24.666664 1 GGTATCA 1720 0.0 24.630814 1 TATACCG 40 0.0019305047 23.125 5 CTAACCC 45 0.0038244699 20.555553 4 GTCTATA 60 9.2323404E-4 18.5 2 GTCGTAG 50 0.0070324442 18.499998 11 CTATACT 95 3.6026795E-6 17.526316 4 GTCTAGG 85 2.720875E-5 17.411764 1 CGTCTGT 140 1.8644641E-9 17.178572 34 GTATTGG 135 2.2151653E-8 16.444445 1 TTAGACT 95 7.053939E-5 15.578948 4 TCTATAC 95 7.053939E-5 15.578948 3 CTAGAGT 110 1.4503223E-5 15.136364 4 CAAGACT 160 1.0939402E-8 15.03125 4 GTATCAA 2820 0.0 15.02305 2 GGTCGGC 75 0.004102467 14.8 22 CGCAAGA 75 0.004102467 14.8 2 GTAACAC 75 0.004102467 14.8 3 TCTAGAC 100 1.09248154E-4 14.799999 3 >>END_MODULE