##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088392_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1307706 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.092728793780864 31.0 31.0 33.0 30.0 34.0 2 31.321977569881916 31.0 31.0 34.0 28.0 34.0 3 31.387278944961636 31.0 31.0 34.0 28.0 34.0 4 35.21800695263308 37.0 35.0 37.0 33.0 37.0 5 35.03016274300187 35.0 35.0 37.0 32.0 37.0 6 35.09748062637932 37.0 35.0 37.0 32.0 37.0 7 34.96047276681456 37.0 35.0 37.0 32.0 37.0 8 35.00282555865003 37.0 35.0 37.0 32.0 37.0 9 36.43781706285664 38.0 35.0 39.0 32.0 39.0 10 36.29927980754084 38.0 35.0 39.0 32.0 39.0 11 36.434193924322436 38.0 35.0 39.0 32.0 39.0 12 36.274798005056184 38.0 35.0 39.0 32.0 39.0 13 36.33341745009964 38.0 35.0 39.0 32.0 39.0 14 37.259143110148614 39.0 36.0 41.0 32.0 41.0 15 37.24986808961647 39.0 36.0 41.0 32.0 41.0 16 37.18261367616269 39.0 36.0 41.0 31.0 41.0 17 37.250460730469996 39.0 36.0 41.0 32.0 41.0 18 37.23165145682592 39.0 36.0 40.0 31.0 41.0 19 37.315183229257954 39.0 36.0 41.0 31.0 41.0 20 37.27060822539623 39.0 36.0 40.0 31.0 41.0 21 37.215590507346455 39.0 36.0 41.0 31.0 41.0 22 37.110775663643054 39.0 36.0 40.0 31.0 41.0 23 36.99178867421271 39.0 36.0 40.0 31.0 41.0 24 36.923683152023465 39.0 36.0 40.0 31.0 41.0 25 36.857087143440495 39.0 35.0 40.0 30.0 41.0 26 36.59396225145407 38.0 35.0 40.0 30.0 41.0 27 36.42996055688358 38.0 35.0 40.0 30.0 41.0 28 36.314353532063016 38.0 35.0 40.0 30.0 41.0 29 36.15001613512517 38.0 35.0 40.0 30.0 41.0 30 35.95350713386648 38.0 35.0 40.0 29.0 41.0 31 35.6953627191433 38.0 34.0 40.0 28.0 41.0 32 35.55496648329212 38.0 34.0 40.0 27.0 41.0 33 35.61145242126288 38.0 34.0 40.0 28.0 41.0 34 35.55950114169393 38.0 34.0 40.0 27.0 41.0 35 35.48563209161692 38.0 34.0 40.0 27.0 41.0 36 35.39730795759903 38.0 34.0 40.0 27.0 41.0 37 35.263686180227054 38.0 34.0 40.0 26.0 41.0 38 35.144839130507926 38.0 34.0 40.0 26.0 41.0 39 35.07850541329626 38.0 34.0 40.0 25.0 41.0 40 34.89838541690563 38.0 33.0 40.0 24.0 41.0 41 34.74534719577642 38.0 33.0 40.0 24.0 41.0 42 34.573482877649866 38.0 33.0 40.0 23.0 41.0 43 34.21435322618387 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 0.0 14 4.0 15 9.0 16 12.0 17 50.0 18 117.0 19 297.0 20 521.0 21 1096.0 22 1965.0 23 3400.0 24 5492.0 25 8586.0 26 13027.0 27 18437.0 28 25404.0 29 33644.0 30 42863.0 31 52015.0 32 62256.0 33 75343.0 34 91036.0 35 109458.0 36 138305.0 37 183457.0 38 234504.0 39 206407.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.809325643531494 22.853531298319346 13.982883002754443 22.354260055394715 2 18.81852648836971 23.376966994110298 35.16654355030871 22.637962967211283 3 20.630248695043075 25.895346507548332 31.853337065058966 21.621067732349626 4 13.820767053144973 16.454004187485566 34.85577033369886 34.8694584256706 5 11.96385120202859 39.992016554179614 34.228335726837685 13.815796516954116 6 31.829325551767752 36.352513485447034 15.208464287844514 16.609696674940697 7 25.019385091144343 34.77555352655719 21.55346844015398 18.651592942144486 8 27.769544530651384 33.5490546040165 20.120348151648766 18.561052713683353 9 25.54977953760249 13.506170347157543 22.970835952423556 37.97321416281642 10 16.656496184922297 27.422218755591853 33.53506063289455 22.386224426591298 11 32.329514432143 21.690119950508755 24.361744918200266 21.61862069914797 12 20.351286910054707 27.280979057983977 31.388094877594813 20.9796391543665 13 30.995116639366955 20.628413420141836 28.307433016289597 20.069036924201615 14 21.25569508742791 22.208049821595985 28.09324114135746 28.443013949618646 15 23.580376628997648 28.672040963335792 26.243589920058486 21.50399248760807 16 22.215696800351147 27.824679247476112 26.952770729812357 23.006853222360377 17 20.095801349844688 26.877906807799306 27.84777312331671 25.178518719039296 18 21.09556735229478 25.548632490789213 31.77403789536792 21.581762261548086 19 20.57809629993286 24.524319686535048 32.948002073860636 21.949581939671457 20 24.32542176911324 23.605994007827448 31.801031730373648 20.267552492685663 21 24.126906200629193 24.381244714025936 30.61024419861957 20.881604886725302 22 22.426906353568768 24.104194673726358 31.595022122709537 21.873876849995337 23 21.44595191885638 25.635578639235423 32.64265821216695 20.27581122974124 24 20.421256765664452 24.86376907347676 31.204185038533126 23.510789122325658 25 21.497263146303528 25.682836967942336 31.974618148115862 20.845281737638278 26 22.54398159831032 25.121395787738223 30.769913115027386 21.56470949892407 27 21.60393849993806 26.282818921072476 30.37525254147339 21.737990037516077 28 21.385081967965277 25.702336763768002 30.707819647535455 22.204761620731265 29 20.495126580439337 25.569049924065503 31.596245639310368 22.3395778561848 30 20.00464936308314 25.910793404633765 32.90709073752051 21.177466494762584 31 21.128449360941985 25.359675645749117 32.055752592708146 21.456122400600748 32 21.904694174378644 25.637719793286873 30.367834972080882 22.089751060253604 33 22.6480569791681 25.49778008206738 30.144619662217654 21.70954327654687 34 21.535727449442 27.80020891545959 30.03266789324206 20.631395741856352 35 20.41085687455743 28.658811690089365 30.263300772497793 20.667030662855414 36 21.07117349006581 25.64521383246693 31.836360772222505 21.44725190524476 37 21.183048789253853 25.787524107100523 31.216267264966284 21.813159838679336 38 21.294924088441896 25.408081021269307 31.787267168614353 21.509727721674444 39 22.182203033403532 25.164907096855103 31.475729254128986 21.17716061561238 40 20.83893474527149 25.768636069575273 30.760583800946083 22.631845384207153 41 21.41100522594528 25.48164495689398 30.748960393238235 22.358389423922503 42 19.513636857214085 26.88922433635695 31.09200386019488 22.505134946234094 43 20.058178214369285 26.588545131703917 30.74314868938431 22.61012796454249 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 94.0 1 136.0 2 178.0 3 530.0 4 882.0 5 882.0 6 1607.5 7 2333.0 8 2506.5 9 2680.0 10 4093.5 11 5507.0 12 5507.0 13 10033.5 14 14560.0 15 23854.0 16 33148.0 17 31799.5 18 30451.0 19 30451.0 20 33274.5 21 36098.0 22 28826.5 23 21555.0 24 23258.5 25 24962.0 26 24962.0 27 27344.0 28 29726.0 29 30929.0 30 32132.0 31 34503.5 32 36875.0 33 36875.0 34 40307.0 35 43739.0 36 48384.0 37 53029.0 38 56267.5 39 59506.0 40 59506.0 41 63126.5 42 66747.0 43 75439.5 44 84132.0 45 103109.5 46 122087.0 47 122087.0 48 124401.0 49 126715.0 50 116954.0 51 107193.0 52 101606.5 53 96020.0 54 96020.0 55 84655.0 56 73290.0 57 63052.5 58 52815.0 59 47453.0 60 42091.0 61 42091.0 62 37644.5 63 33198.0 64 29261.5 65 25325.0 66 21683.0 67 18041.0 68 18041.0 69 15230.0 70 12419.0 71 10578.0 72 8737.0 73 6854.0 74 4971.0 75 4971.0 76 3836.5 77 2702.0 78 2153.0 79 1604.0 80 1265.0 81 926.0 82 926.0 83 699.0 84 472.0 85 404.0 86 336.0 87 282.0 88 228.0 89 228.0 90 187.5 91 147.0 92 93.5 93 40.0 94 26.0 95 12.0 96 12.0 97 6.5 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1307706.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.52125282497891 #Duplication Level Percentage of deduplicated Percentage of total 1 80.01548976627633 39.62467298630283 2 11.21704723248656 11.109644638993938 3 3.494472845644732 5.191520198375888 4 1.5143527942612878 2.99970590363306 5 0.8474143742960082 2.098251073851697 6 0.535635024862737 1.5915190492884879 7 0.37116307901123646 1.2866322472509142 8 0.2691564917282198 1.0663173341086014 9 0.2079066937599389 0.9266219951122259 >10 1.3248556983444535 12.399195059191454 >50 0.11951757089953371 4.085954281676094 >100 0.07150966230384305 6.307260582655045 >500 0.006514975368331211 2.319400581173273 >1k 0.004188198451070065 4.427709130914336 >5k 3.1023692230148624E-4 0.9840975308144267 >10k+ 4.6535538345222937E-4 3.5814974066577028 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16970 1.2976922947512668 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 15957 1.2202283999614592 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13697 1.0474066800947615 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7119 0.5443884175800983 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5692 0.43526603074391335 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 4337 0.3316494686114463 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 4168 0.3187260745152198 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4105 0.3139084778994667 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3983 0.3045791638181671 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 3418 0.26137373385149265 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 3167 0.24217981717603193 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 2806 0.21457422386989125 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 2552 0.19515089783177564 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2322 0.17756284669489933 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2265 0.17320406880445605 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2113 0.16158066109660732 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1977 0.1511807699895848 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 1881 0.14383967038462775 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1752 0.13397506779046667 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1527 0.11676936559134853 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1491 0.11401645323948961 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 1489 0.11386351366438634 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1468 0.11225764812580197 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1429 0.10927532641128816 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1399 0.10698123278473907 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1371 0.10484007873329326 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1332 0.10185775701877944 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 7.646978755163623E-5 0.0 3 0.0 0.0 0.0 7.646978755163623E-5 0.0 4 0.0 0.0 0.0 7.646978755163623E-5 0.0 5 0.0 0.0 0.0 7.646978755163623E-5 0.0 6 7.646978755163623E-5 0.0 0.0 7.646978755163623E-5 0.0 7 7.646978755163623E-5 0.0 0.0 7.646978755163623E-5 0.0 8 7.646978755163623E-5 0.0 0.0 7.646978755163623E-5 0.0 9 7.646978755163623E-5 0.0 0.0 1.5293957510327245E-4 0.0 10 7.646978755163623E-5 0.0 0.0 3.058791502065449E-4 0.0 11 7.646978755163623E-5 0.0 0.0 6.117583004130898E-4 0.0 12 7.646978755163623E-5 0.0 0.0 0.0011470468132745433 0.0 13 7.646978755163623E-5 0.0 0.0 0.0012235166008261796 0.0 14 7.646978755163623E-5 0.0 0.0 0.0016058655385843606 0.0 15 7.646978755163623E-5 0.0 0.0 0.001758805113687633 0.0 16 7.646978755163623E-5 0.0 0.0 0.0029823217145138127 0.0 17 7.646978755163623E-5 0.0 0.0 0.004511717465546537 0.0 18 7.646978755163623E-5 0.0 0.0 0.005047005978407991 0.0 19 7.646978755163623E-5 0.0 0.0 0.005964643429027625 0.0 20 7.646978755163623E-5 0.0 0.0 0.007723448542715259 0.0 21 7.646978755163623E-5 0.0 0.0 0.011470468132745434 0.0 22 7.646978755163623E-5 0.0 0.0 0.02064684263894178 0.0 23 7.646978755163623E-5 0.0 0.0 0.03563492099906248 0.0 24 7.646978755163623E-5 0.0 0.0 0.057658219813933716 0.0 25 7.646978755163623E-5 0.0 0.0 0.06530519856909733 0.0 26 7.646978755163623E-5 0.0 0.0 0.07555215010101658 0.0 27 7.646978755163623E-5 0.0 0.0 0.1317574439514692 0.0 28 7.646978755163623E-5 0.0 0.0 0.19675676337036 0.0 29 7.646978755163623E-5 0.0 0.0 0.27047363857013734 0.0 30 7.646978755163623E-5 0.0 0.0 0.41286038299128397 0.0 31 7.646978755163623E-5 0.0 0.0 0.6144347429773971 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAAGCG 25 0.005496617 29.6 34 GGTATCA 3960 0.0 28.544193 1 GACGTAT 45 1.323348E-4 24.666668 28 TTATGCG 60 3.7267913E-5 21.583334 4 TAATACG 55 5.143616E-4 20.181818 4 GCGCATT 65 6.9030604E-5 19.923077 11 GTATTGG 430 0.0 18.930233 1 GGACGTA 60 9.2377426E-4 18.5 27 CGTGTCT 80 1.6169482E-5 18.5 35 ATAATAC 180 0.0 17.472223 3 GTATCAA 6535 0.0 17.353481 2 ATTGGAC 440 0.0 17.238636 3 TATGCGG 65 0.0015800915 17.076923 5 ACGTATA 65 0.0015800915 17.076923 29 TTGGACC 705 0.0 17.056738 4 ACGGACC 120 1.04149876E-7 16.958334 8 AAGACGG 145 2.9795046E-9 16.586206 5 ATTAGAC 140 3.473906E-8 15.857143 3 TGGACGT 70 0.0025927492 15.857143 26 GTAGACT 70 0.0025927492 15.857143 4 >>END_MODULE