##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088388_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 997948 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.353943291634433 31.0 31.0 34.0 30.0 34.0 2 31.61260406353838 31.0 31.0 34.0 30.0 34.0 3 31.718291935050726 31.0 31.0 34.0 30.0 34.0 4 35.50114735437117 37.0 35.0 37.0 33.0 37.0 5 35.29173764564887 37.0 35.0 37.0 33.0 37.0 6 35.32599794778886 37.0 35.0 37.0 32.0 37.0 7 35.208600047297054 37.0 35.0 37.0 32.0 37.0 8 35.2105740980492 37.0 35.0 37.0 32.0 37.0 9 36.76000352723789 39.0 37.0 39.0 32.0 39.0 10 36.60778818134813 39.0 35.0 39.0 32.0 39.0 11 36.722325211333654 39.0 35.0 39.0 32.0 39.0 12 36.5869454119854 39.0 35.0 39.0 32.0 39.0 13 36.633113148180065 39.0 35.0 39.0 32.0 39.0 14 37.6729909774858 39.0 37.0 41.0 32.0 41.0 15 37.671056006926214 39.0 36.0 41.0 32.0 41.0 16 37.633750455935576 39.0 36.0 41.0 32.0 41.0 17 37.63477856561664 39.0 36.0 41.0 32.0 41.0 18 37.58475591914609 39.0 36.0 41.0 32.0 41.0 19 37.642316032498684 39.0 37.0 41.0 32.0 41.0 20 37.5977465759739 39.0 36.0 41.0 32.0 41.0 21 37.551843382621136 39.0 36.0 41.0 32.0 41.0 22 37.45021784702209 39.0 36.0 41.0 32.0 41.0 23 37.351910119565346 39.0 36.0 41.0 31.0 41.0 24 37.28050158926116 39.0 36.0 41.0 31.0 41.0 25 37.2216909097468 39.0 36.0 41.0 31.0 41.0 26 37.002444015119025 39.0 36.0 40.0 31.0 41.0 27 36.85744046784001 39.0 35.0 40.0 30.0 41.0 28 36.7781227077964 39.0 35.0 40.0 30.0 41.0 29 36.6383058035088 39.0 35.0 40.0 30.0 41.0 30 36.47998893729934 38.0 35.0 40.0 30.0 41.0 31 36.28316605674845 38.0 35.0 40.0 30.0 41.0 32 36.137934040651416 38.0 35.0 40.0 30.0 41.0 33 36.26141542445097 38.0 35.0 40.0 30.0 41.0 34 36.249215389980236 38.0 35.0 40.0 30.0 41.0 35 36.21345200351121 38.0 35.0 40.0 30.0 41.0 36 36.152887725612956 38.0 35.0 40.0 30.0 41.0 37 36.05985382003872 38.0 35.0 40.0 29.0 41.0 38 35.95853591569902 38.0 35.0 40.0 29.0 41.0 39 35.948541406967095 38.0 35.0 40.0 28.0 41.0 40 35.843983854870196 38.0 35.0 40.0 28.0 41.0 41 35.74381631107032 38.0 35.0 40.0 27.0 41.0 42 35.67753329832817 38.0 35.0 40.0 27.0 41.0 43 35.34704613867657 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 7.0 16 7.0 17 31.0 18 46.0 19 143.0 20 273.0 21 568.0 22 987.0 23 1781.0 24 3040.0 25 4737.0 26 7332.0 27 10569.0 28 15233.0 29 20420.0 30 26800.0 31 33660.0 32 42121.0 33 51809.0 34 64773.0 35 79520.0 36 99565.0 37 133352.0 38 184756.0 39 216417.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.08320273200607 21.605434351288842 13.025728795488343 24.285634121216738 2 18.26087130792386 23.01061778770036 35.024570418498755 23.70394048587702 3 19.340586884286555 25.641817008501445 31.430194759646795 23.587401347565205 4 13.650611053882567 16.775723785207244 36.57234645492551 33.00131870598468 5 13.077034073919682 38.65191372696774 34.57975766272391 13.691294536388671 6 31.605253981169362 37.501252570274204 16.224592864558073 14.668900583998365 7 25.94203305182234 33.200226865528066 22.828143350154516 18.02959673249508 8 26.51811517233363 33.947660599550275 20.89667998733401 18.637544240782084 9 26.068191929840033 14.000428880061888 22.054255331941146 37.877123858156935 10 16.151743377410448 27.421268442844713 34.31100618469098 22.11598199505385 11 33.462665389379005 22.822932657813837 23.484690585080585 20.229711367726573 12 20.179708762380404 27.21664856285097 31.22106562666592 21.382577048102707 13 29.324473820279213 21.323155114294533 26.994893521506132 22.357477543920123 14 21.23196799833258 22.408482205485655 27.60424390850024 28.75530588768152 15 23.61926673534092 29.354836123725885 24.51871239784037 22.507184743092825 16 22.638955135938946 28.10146420454773 26.356884326638262 22.90269633287506 17 21.20942173339693 27.81227077963982 27.544922180314003 23.433385306649242 18 21.511742094778484 26.935070765210213 29.499833658667583 22.05335348134372 19 21.682692885801664 26.55368816812099 30.262799264089914 21.500819681987437 20 23.240389278800098 25.996544910155638 29.33489520496058 21.428170606083683 21 23.198603534452698 26.491761093764403 28.81292412029485 21.496711251488055 22 22.785054932721945 26.253071302312346 29.283589926529235 21.67828383843647 23 22.135221474465602 26.658302837422394 29.342110009739987 21.864365678372017 24 21.65904435902472 26.98487295931251 28.87705571833402 22.47902696332875 25 22.252161435265165 27.010224981662372 29.1025183676905 21.635095215381963 26 22.318297145743067 26.999001952005514 28.714121377065737 21.96857952518568 27 22.164080693583234 27.22596768569104 28.54627696032258 22.063674660403148 28 21.776685759177834 27.40523554333492 28.799997595065076 22.018081102422173 29 21.275657649496768 27.215446095387737 29.46856950462349 22.04032675049201 30 21.409031332293868 27.528488458316463 29.505946201605692 21.556534007783974 31 21.752235587425396 27.351725741220985 29.10913193873829 21.78690673261533 32 21.936213109300283 27.384593185216062 28.560906981125267 22.118286724358384 33 22.06838432463415 27.19149695174498 28.67574262386417 22.0643760997567 34 22.051850397014675 27.523878999707403 28.697487243824327 21.7267833594536 35 21.67096882803513 27.702846240485474 29.007523438094974 21.618661493384426 36 21.490799119793817 26.98377069747121 29.383094109111894 22.142336073623074 37 21.73129261244073 26.529538613234354 29.379987734831875 22.35918103949304 38 21.51955813328951 26.432539571200103 29.75455634962944 22.29334594588095 39 21.86837390324947 26.15757534460713 29.845042026237838 22.129008725905557 40 21.22325010922413 26.163186859435562 30.064792955143954 22.548770076196355 41 20.964719604628698 25.90585882230337 30.277329079270665 22.852092493797272 42 20.412787039004034 26.551283233194518 30.143153751498076 22.892775976303376 43 20.469703832263804 25.92740303101965 30.299173904852754 23.303719231863784 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 99.0 1 127.0 2 155.0 3 439.5 4 724.0 5 724.0 6 1136.0 7 1548.0 8 1727.5 9 1907.0 10 2565.0 11 3223.0 12 3223.0 13 5453.0 14 7683.0 15 11572.0 16 15461.0 17 15287.5 18 15114.0 19 15114.0 20 17091.5 21 19069.0 22 17450.0 23 15831.0 24 18315.0 25 20799.0 26 20799.0 27 23169.5 28 25540.0 29 27795.5 30 30051.0 31 32974.5 32 35898.0 33 35898.0 34 39843.5 35 43789.0 36 48283.0 37 52777.0 38 54867.5 39 56958.0 40 56958.0 41 59747.5 42 62537.0 43 65213.5 44 67890.0 45 72366.5 46 76843.0 47 76843.0 48 77784.0 49 78725.0 50 73304.0 51 67883.0 52 64937.0 53 61991.0 54 61991.0 55 57887.0 56 53783.0 57 49864.5 58 45946.0 59 42199.5 60 38453.0 61 38453.0 62 34123.5 63 29794.0 64 26242.5 65 22691.0 66 19156.5 67 15622.0 68 15622.0 69 13330.5 70 11039.0 71 9364.0 72 7689.0 73 6148.0 74 4607.0 75 4607.0 76 3507.0 77 2407.0 78 1893.0 79 1379.0 80 1117.5 81 856.0 82 856.0 83 661.0 84 466.0 85 383.5 86 301.0 87 265.0 88 229.0 89 229.0 90 189.5 91 150.0 92 88.0 93 26.0 94 19.5 95 13.0 96 13.0 97 7.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 997948.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.14182396653863 #Duplication Level Percentage of deduplicated Percentage of total 1 81.0087390761891 47.099958471190455 2 11.143986116189264 12.958633581060534 3 3.357537729681194 5.856401029204072 4 1.3932061008031407 3.240141754480155 5 0.7577172748277752 2.202753220472094 6 0.45055201089892516 1.5717549423273178 7 0.30618529817717427 1.2461520195431584 8 0.21893936668523264 1.0183627293726598 9 0.17922584499478306 0.9378465776946735 >10 1.0211952721182451 11.341987181220428 >50 0.10958042653819491 4.442061300398127 >100 0.050366207129686355 5.056140148815794 >500 0.0019038770899993313 0.7994183448314348 >1k 3.4615947090896933E-4 0.3835074662830561 >5k 5.19239206363454E-4 1.844881233106079 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6550 0.6563468236821959 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6369 0.6382096061117413 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5414 0.5425132371626578 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2242 0.2246610043809898 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1569 0.15722262081791838 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.0020562193621311E-4 0.0 10 0.0 0.0 0.0 1.0020562193621311E-4 0.0 11 0.0 0.0 0.0 2.0041124387242622E-4 0.0 12 1.0020562193621311E-4 0.0 0.0 2.0041124387242622E-4 0.0 13 1.0020562193621311E-4 0.0 0.0 2.0041124387242622E-4 0.0 14 1.0020562193621311E-4 0.0 0.0 3.006168658086393E-4 0.0 15 1.0020562193621311E-4 0.0 0.0 5.010281096810656E-4 0.0 16 1.0020562193621311E-4 0.0 0.0 6.012337316172786E-4 0.0 17 1.0020562193621311E-4 0.0 0.0 0.0011022618412983441 0.0 18 1.0020562193621311E-4 0.0 0.0 0.0014028787071069836 0.0 19 1.0020562193621311E-4 0.0 0.0 0.0014028787071069836 0.0 20 1.0020562193621311E-4 0.0 0.0 0.0016032899509794097 0.0 21 1.0020562193621311E-4 0.0 0.0 0.002605346170341541 0.0 22 1.0020562193621311E-4 0.0 0.0 0.00450925298712959 0.0 23 1.0020562193621311E-4 0.0 0.0 0.007816038511024623 0.0 24 1.0020562193621311E-4 0.0 0.0 0.015231254534304392 0.0 25 1.0020562193621311E-4 0.0 0.0 0.02224564806983931 0.0 26 1.0020562193621311E-4 0.0 0.0 0.034270322702184886 0.0 27 1.0020562193621311E-4 0.0 0.0 0.09850212636329748 0.0 28 1.0020562193621311E-4 0.0 0.0 0.17305510908384003 0.0 29 1.0020562193621311E-4 0.0 0.0 0.25672680340057796 0.0 30 1.0020562193621311E-4 0.0 0.0 0.3801801296259925 0.0 31 1.0020562193621311E-4 0.0 0.0 0.6020353765927684 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAGCAT 45 1.3230415E-4 24.666666 10 GGTATCA 1980 0.0 23.171715 1 AGTGCGC 55 5.142442E-4 20.181818 8 ATACGGG 65 6.900968E-5 19.923077 3 GACCGTC 75 9.263766E-6 19.733334 22 TACGGGC 75 9.263766E-6 19.733334 4 GGGCGTC 95 1.6755621E-7 19.473684 7 AACCCGC 90 2.151637E-6 18.5 6 ACCGACC 90 2.151637E-6 18.5 8 ATGCGAC 50 0.0070342477 18.5 21 TATACCG 70 1.2189927E-4 18.5 5 GTGCGAA 50 0.0070342477 18.5 12 CTAGCGG 70 1.2189927E-4 18.5 29 AACCCGT 95 3.6054244E-6 17.526316 29 CGTTGAA 95 3.6054244E-6 17.526316 33 CCCGTTG 95 3.6054244E-6 17.526316 31 CGTAATG 85 2.7225327E-5 17.411764 21 TACCGAC 85 2.7225327E-5 17.411764 7 ACGTTTA 75 2.0669225E-4 17.266666 26 GGTCTAG 65 0.0015797372 17.076923 1 >>END_MODULE