##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088387_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1497589 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.36472823985753 31.0 31.0 34.0 30.0 34.0 2 31.613060058534085 31.0 31.0 34.0 30.0 34.0 3 31.705684269849737 31.0 31.0 34.0 30.0 34.0 4 35.49308788993509 37.0 35.0 37.0 33.0 37.0 5 35.2932500171943 37.0 35.0 37.0 33.0 37.0 6 35.33536838211285 37.0 35.0 37.0 32.0 37.0 7 35.20969705306329 37.0 35.0 37.0 32.0 37.0 8 35.22397066217767 37.0 35.0 37.0 32.0 37.0 9 36.750676587501644 39.0 37.0 39.0 32.0 39.0 10 36.61089457788486 39.0 35.0 39.0 32.0 39.0 11 36.72573449724858 39.0 35.0 39.0 32.0 39.0 12 36.58292428697059 39.0 35.0 39.0 32.0 39.0 13 36.62840071608432 39.0 35.0 39.0 32.0 39.0 14 37.65853581990787 39.0 36.0 41.0 32.0 41.0 15 37.64875743611899 39.0 36.0 41.0 32.0 41.0 16 37.61367905346527 39.0 36.0 41.0 32.0 41.0 17 37.64369730279803 39.0 36.0 41.0 32.0 41.0 18 37.6105820755895 39.0 36.0 41.0 32.0 41.0 19 37.67325013738749 39.0 37.0 41.0 32.0 41.0 20 37.6353906178531 39.0 37.0 41.0 32.0 41.0 21 37.57734264875076 39.0 36.0 41.0 32.0 41.0 22 37.47626017552212 39.0 36.0 41.0 32.0 41.0 23 37.36436832802591 39.0 36.0 41.0 31.0 41.0 24 37.298220673362316 39.0 36.0 41.0 31.0 41.0 25 37.237993868811806 39.0 36.0 41.0 31.0 41.0 26 37.01064911668021 39.0 36.0 41.0 31.0 41.0 27 36.88005187003911 39.0 35.0 40.0 31.0 41.0 28 36.79715462653638 39.0 35.0 40.0 30.0 41.0 29 36.659222256573734 39.0 35.0 40.0 30.0 41.0 30 36.489791257815064 38.0 35.0 40.0 30.0 41.0 31 36.27355903388713 38.0 35.0 40.0 30.0 41.0 32 36.11486529348172 38.0 35.0 40.0 30.0 41.0 33 36.20372545471421 38.0 35.0 40.0 30.0 41.0 34 36.181183221831894 38.0 35.0 40.0 30.0 41.0 35 36.13669170914049 38.0 35.0 40.0 30.0 41.0 36 36.06993307242508 38.0 35.0 40.0 29.0 41.0 37 35.97183806772085 38.0 35.0 40.0 29.0 41.0 38 35.865397649154744 38.0 35.0 40.0 28.0 41.0 39 35.83243867309389 38.0 35.0 40.0 28.0 41.0 40 35.70281098485633 38.0 35.0 40.0 27.0 41.0 41 35.58188862231226 38.0 35.0 40.0 27.0 41.0 42 35.472008675277394 38.0 34.0 40.0 26.0 41.0 43 35.14534027693846 38.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 0.0 15 9.0 16 9.0 17 26.0 18 77.0 19 198.0 20 429.0 21 823.0 22 1506.0 23 2648.0 24 4437.0 25 7295.0 26 11282.0 27 16554.0 28 23457.0 29 31861.0 30 41220.0 31 51211.0 32 63131.0 33 77667.0 34 96633.0 35 118685.0 36 150091.0 37 200870.0 38 273250.0 39 324219.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.574958149398796 21.51671787119163 13.069740763320242 23.838583216089326 2 18.22889991846895 22.57615407164449 35.58105728607782 23.613888723808735 3 19.709880347678833 25.653901036933362 31.225456383560505 23.410762231827288 4 13.485275332551186 16.083518241653753 35.86417902375084 34.56702740204422 5 12.577482874139701 39.0225222006839 34.63213204691007 13.767862878266332 6 32.1180243711726 36.61705581437898 15.867771464667543 15.397148349780881 7 25.90670738099706 33.46953002459286 22.21250289632202 18.41125969808806 8 27.13541565810112 33.78016264809637 20.435179478481746 18.649242215320758 9 26.05628112920167 13.70028759559532 22.133776356530397 38.10965491867261 10 16.100612384305705 27.34021149995092 34.23175517448379 22.327420941259586 11 33.072692173887496 22.188597806207177 23.926257471175337 20.812452548729993 12 20.54121658211966 26.76969448894189 31.51291843089125 21.176170498047195 13 30.344507071032172 21.139311252953917 27.218883151518874 21.29729852449504 14 21.297699168463442 21.99815837322523 27.740187728408795 28.96395472990253 15 23.44762147692057 28.80216134066156 25.465130953819777 22.2850862285981 16 22.65160868569414 27.8608483368935 26.389349814935876 23.098193162476488 17 20.805174183303965 27.102496078697158 27.491588146013356 24.600741591985518 18 21.53220943796996 26.31843583252815 30.30597847607054 21.843376253431348 19 21.308983973573522 25.545660391469223 31.159617224752584 21.985738410204668 20 23.857947674562247 24.853881806022883 30.30637912003894 20.98179139937593 21 23.54504473523777 25.4618590280778 29.458950352867173 21.534145883817253 22 22.666632834509333 25.26667864146972 30.05404019393839 22.012648330082552 23 22.0957151795319 26.16559015858156 30.538619073724497 21.20007558816204 24 21.34590999266154 25.98944036047273 29.605452497314015 23.059197149551714 25 21.988008726025633 26.26381470483557 30.345508680953188 21.40266788818561 26 22.75030064991129 25.793258363943643 29.50108474354446 21.955356242600608 27 21.894258037418812 26.578654090007337 29.356118400976506 22.17096947159735 28 21.69774217091605 26.296600736250063 29.504690539260103 22.50096655357378 29 21.13704093713295 26.34561284838497 30.178306598138743 22.339039616343335 30 20.961692426960933 26.612441731342845 30.901936379073298 21.523929462622924 31 21.721313391057226 26.293262036513354 30.319199727027907 21.66622484540151 32 22.04897338321796 26.32384452610162 29.40172503937996 22.225457051300456 33 22.672041528082808 26.16432145268161 29.153325778968732 22.010311240266855 34 21.774131620891982 27.45366051700433 29.2407329380758 21.531474924027886 35 20.97197562215 27.898108225955188 29.54595686800584 21.58395928388897 36 21.475651864430095 26.0969464919948 30.428174886434128 21.999226757140978 37 21.60546051019338 25.991376806320027 30.009702261434878 22.39346042205171 38 21.54803487472197 25.847612395657286 30.428174886434128 22.176177843186615 39 21.939731127832804 25.384935386143997 30.680380264545214 21.99495322147799 40 20.98606493503892 25.734964666540687 30.359931863815774 22.91903853460462 41 21.413552049327286 25.33245102628291 30.480993116268884 22.77300380812092 42 19.98705919982051 26.27790401772449 30.705821156538942 23.029215625916056 43 20.28874410802964 25.99431486208833 30.465501549490547 23.251439480391483 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 107.0 1 176.5 2 246.0 3 652.5 4 1059.0 5 1059.0 6 1731.5 7 2404.0 8 2553.5 9 2703.0 10 3978.0 11 5253.0 12 5253.0 13 8997.5 14 12742.0 15 20482.5 16 28223.0 17 28159.5 18 28096.0 19 28096.0 20 30137.5 21 32179.0 22 27702.5 23 23226.0 24 26030.0 25 28834.0 26 28834.0 27 32705.5 28 36577.0 29 39177.0 30 41777.0 31 45669.5 32 49562.0 33 49562.0 34 54544.0 35 59526.0 36 64580.5 37 69635.0 38 72914.5 39 76194.0 40 76194.0 41 80138.0 42 84082.0 43 90594.5 44 97107.0 45 111157.5 46 125208.0 47 125208.0 48 127196.5 49 129185.0 50 119923.5 51 110662.0 52 105765.0 53 100868.0 54 100868.0 55 92756.0 56 84644.0 57 75901.5 58 67159.0 59 61100.0 60 55041.0 61 55041.0 62 49319.5 63 43598.0 64 38543.0 65 33488.0 66 28795.0 67 24102.0 68 24102.0 69 20376.0 70 16650.0 71 14136.0 72 11622.0 73 9282.0 74 6942.0 75 6942.0 76 5493.5 77 4045.0 78 3162.0 79 2279.0 80 1795.5 81 1312.0 82 1312.0 83 958.5 84 605.0 85 451.5 86 298.0 87 252.0 88 206.0 89 206.0 90 156.5 91 107.0 92 67.0 93 27.0 94 17.0 95 7.0 96 7.0 97 4.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1497589.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.03494369657639 #Duplication Level Percentage of deduplicated Percentage of total 1 80.06575435743383 45.66545791800154 2 11.703506806278062 13.350177034971358 3 3.6287958130374194 6.2090449464888415 4 1.5683137429190919 3.5779474410382957 5 0.7766379920923453 2.2147752075804528 6 0.45879542650416727 1.570042279134716 7 0.315816976712602 1.2608822439658363 8 0.23109051599319277 1.054418765478763 9 0.162721900907386 0.835275101080738 >10 0.966134446965081 10.433564139522979 >50 0.0765266540114026 3.0085917621242673 >100 0.03887915057150748 3.906860090214167 >500 0.004332833553918719 1.5997535478408802 >1k 0.002224968581742045 2.4217378044072513 >5k 1.1710360956537079E-4 0.34844331409009155 >10k+ 3.5131082869611235E-4 2.543028404059849 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13322 0.8895631578490495 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 12856 0.8584464763029108 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 11897 0.7944102153528105 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 5217 0.3483599305283359 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4315 0.28812978727808497 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 2746 0.18336138954012082 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 2575 0.17194303644057213 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2543 0.16980626860907766 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2520 0.16827046673019097 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 2164 0.1444989246048148 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 2122 0.1416944168259783 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 2049 0.13681991521038148 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 1892 0.12633639803711166 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1714 0.11445062697442357 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1651 0.1102438653061688 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 1551 0.10356646583274852 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 6.677399473420277E-5 0.0 11 0.0 0.0 0.0 1.3354798946840554E-4 0.0 12 0.0 0.0 0.0 1.3354798946840554E-4 0.0 13 0.0 0.0 0.0 4.0064396840521665E-4 0.0 14 0.0 0.0 0.0 5.341919578736222E-4 0.0 15 0.0 0.0 0.0 7.345139420762305E-4 0.0 16 0.0 0.0 0.0 9.348359262788389E-4 0.0 17 0.0 0.0 0.0 0.0014022538894182582 0.0 18 0.0 0.0 0.0 0.001469027884152461 0.0 19 0.0 0.0 0.0 0.002003219842026083 0.0 20 0.0 0.0 0.0 0.0026041857946339083 0.0 21 0.0 0.0 0.0 0.004073213678786369 0.0 22 0.0 0.0 0.0 0.007745783389167522 0.0 23 0.0 0.0 0.0 0.013087702967903745 0.0 24 0.0 0.0 0.0 0.023170576172768364 0.0 25 0.0 0.0 0.0 0.028512495751504587 0.0 26 0.0 0.0 0.0 0.03712634107221674 0.0 27 0.0 0.0 0.0 0.10877483742201632 0.0 28 0.0 0.0 0.0 0.18750137721364138 0.0 29 0.0 0.0 0.0 0.27510885830491544 0.0 30 0.0 0.0 0.0 0.42281293465697195 0.0 31 0.0 0.0 0.0 0.664200925621115 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3145 0.0 27.882353 1 GTATTGG 350 0.0 18.5 1 TAGGTCG 50 0.0070358547 18.499998 21 CGCATAC 50 0.0070358547 18.499998 37 TAATGCG 50 0.0070358547 18.499998 5 CGGGATA 115 6.4086635E-8 17.695652 24 ATTGGAC 385 0.0 17.298702 3 GCGTTAT 105 9.346795E-6 15.857144 1 TTGGACC 560 0.0 15.857142 4 GTATCAA 5545 0.0 15.714158 2 TAGACTG 190 2.7284841E-11 15.578948 5 TCTAGAC 145 5.3483745E-8 15.310345 3 GACCCTC 535 0.0 15.214952 7 TAATACA 405 0.0 15.074074 4 ACAACCG 75 0.0041051772 14.8 29 CTAACGC 75 0.0041051772 14.8 3 GCGCTAG 75 0.0041051772 14.8 11 TCGATCC 100 1.0937154E-4 14.799999 32 CGAATTA 100 1.0937154E-4 14.799999 15 CGGTATA 115 2.2106175E-5 14.478261 26 >>END_MODULE