##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088386_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2109972 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.42020273254811 31.0 31.0 34.0 30.0 34.0 2 31.656250888637384 31.0 31.0 34.0 30.0 34.0 3 31.738487998892875 31.0 31.0 34.0 30.0 34.0 4 35.51956281884309 37.0 35.0 37.0 33.0 37.0 5 35.345975207253936 37.0 35.0 37.0 33.0 37.0 6 35.394675379578494 37.0 35.0 37.0 33.0 37.0 7 35.267635779052995 37.0 35.0 37.0 32.0 37.0 8 35.29384939705361 37.0 35.0 37.0 32.0 37.0 9 36.812004140339305 39.0 37.0 39.0 32.0 39.0 10 36.69019731067521 39.0 35.0 39.0 32.0 39.0 11 36.80516613490605 39.0 37.0 39.0 32.0 39.0 12 36.67141222727126 39.0 35.0 39.0 32.0 39.0 13 36.70863310034446 39.0 35.0 39.0 32.0 39.0 14 37.732008292053166 40.0 37.0 41.0 32.0 41.0 15 37.71962281963931 40.0 37.0 41.0 32.0 41.0 16 37.679291478749484 39.0 37.0 41.0 32.0 41.0 17 37.73818515127215 39.0 37.0 41.0 32.0 41.0 18 37.707405595903644 39.0 37.0 41.0 32.0 41.0 19 37.780522679921816 40.0 37.0 41.0 32.0 41.0 20 37.74550136210338 40.0 37.0 41.0 32.0 41.0 21 37.69614288720419 40.0 37.0 41.0 32.0 41.0 22 37.597877128227296 39.0 36.0 41.0 32.0 41.0 23 37.484672782387634 39.0 36.0 41.0 32.0 41.0 24 37.4190946609718 39.0 36.0 41.0 32.0 41.0 25 37.367251792914786 39.0 36.0 41.0 31.0 41.0 26 37.14397205270971 39.0 36.0 41.0 31.0 41.0 27 36.9953662892209 39.0 36.0 41.0 31.0 41.0 28 36.88985256676392 39.0 35.0 40.0 31.0 41.0 29 36.74349659616336 39.0 35.0 40.0 30.0 41.0 30 36.56717672082852 38.0 35.0 40.0 30.0 41.0 31 36.31524162405947 38.0 35.0 40.0 30.0 41.0 32 36.18476690685943 38.0 35.0 40.0 30.0 41.0 33 36.23287797184039 38.0 35.0 40.0 30.0 41.0 34 36.193226734762355 38.0 35.0 40.0 30.0 41.0 35 36.11286168726409 38.0 35.0 40.0 30.0 41.0 36 36.0296530001346 38.0 35.0 40.0 29.0 41.0 37 35.91984917335396 38.0 35.0 40.0 29.0 41.0 38 35.792218569725094 38.0 35.0 40.0 28.0 41.0 39 35.73027746339762 38.0 35.0 40.0 27.0 41.0 40 35.55693724845638 38.0 35.0 40.0 27.0 41.0 41 35.407821525593704 38.0 34.0 40.0 26.0 41.0 42 35.254218065453 38.0 34.0 40.0 25.0 41.0 43 34.91596049615824 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 2.0 15 9.0 16 14.0 17 40.0 18 118.0 19 269.0 20 547.0 21 1104.0 22 2110.0 23 3656.0 24 6311.0 25 10008.0 26 15133.0 27 22586.0 28 32044.0 29 44075.0 30 57747.0 31 70968.0 32 87234.0 33 109106.0 34 134312.0 35 165239.0 36 210479.0 37 290490.0 38 382540.0 39 463830.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.284291924253026 22.245887623153294 13.67179280104191 22.798027651551774 2 17.931091028696116 22.874142405681212 36.219580165044846 22.975186400577826 3 19.56988054817789 25.969681114251753 32.315879073276804 22.144559264293555 4 12.774624497386695 15.941633348688988 36.088583166032535 35.19515898789179 5 11.83409068935512 39.81256623310641 34.68368300621999 13.669660071318482 6 31.160745261074556 36.74897107639343 15.813148231350937 16.27713543118108 7 24.965971112412866 34.816623158980306 21.768724893031756 18.448680835575068 8 27.565531675301852 33.26598646806688 20.39349337337178 18.774988483259495 9 25.601619357982003 13.679944567984789 23.306707387586187 37.41172868644703 10 16.31557196019663 27.461075312847754 33.768647166881834 22.45470556007378 11 31.986538209985728 22.09692830047034 24.79212994295659 21.12440354658735 12 20.394393859255004 27.32500715649307 31.514588819188123 20.766010165063804 13 30.647183943673184 20.93762381680894 28.354215127025384 20.060977112492488 14 21.08013755632776 22.534232681760706 28.250043128534408 28.135586633377123 15 23.159691218651243 29.033939786878687 26.352150644653104 21.454218349816966 16 22.182806217333688 28.206914594127312 26.88642313736865 22.723856051170348 17 19.944340493617922 27.055050967500993 27.76875712094758 25.23185141793351 18 20.937055088882698 26.27129649113827 31.69255326610969 21.099095153869342 19 20.363161217305255 25.161803095017376 32.750529390911346 21.724506296766023 20 24.133543004362142 24.13107851668174 31.561224509140406 20.174153969815713 21 23.670503684409084 25.052939091134856 30.488177094293196 20.788380130162864 22 22.313424064395168 24.623928658768932 31.385534973923825 21.67711230291208 23 21.33578075917595 26.103379570913738 32.298011537593865 20.26282813231645 24 20.10557486070905 25.66726003946972 30.926761113417616 23.300403986403612 25 21.255827091544344 26.268168487543907 31.88568379106453 20.59032062984722 26 22.364988729708262 25.62233053329618 30.65216031302785 21.36052042396771 27 21.24919193240479 26.783767746680997 30.346469052669896 21.62057126824432 28 20.929282473890648 26.391866811502712 30.56377051449024 22.1150802001164 29 20.049602553967542 26.411487924958244 31.30216893873473 22.236740582339483 30 19.55006985874694 26.758364565975285 32.8478292602935 20.843736314984273 31 20.867717675874374 26.18030002293869 31.80587230541448 21.146109995772456 32 21.759103912279404 26.224044679265884 30.14855173433581 21.868299674118898 33 22.353235019232482 26.200015924381937 29.910633885188997 21.536115171196585 34 21.15900116210073 28.40800731004961 29.824424210368665 20.60856731748099 35 20.11789729911108 29.139912757136116 30.191395904779778 20.55079403897303 36 20.615012900645127 26.414189382607923 31.73738798429553 21.233409732451424 37 20.945206855825575 26.4085494973393 31.014392608053566 21.63185103878156 38 20.95667620233823 25.948875150949867 31.600419342057616 21.49402930465428 39 21.826592959527424 25.704606506626625 31.46710003734647 21.001700496499478 40 20.39216634154387 26.233002144104283 30.898324717105254 22.4765067972466 41 20.980278411277496 25.81944215373474 30.969557889867733 22.23072154512003 42 19.20087091203106 27.200218770675626 31.295202021638204 22.30370829565511 43 19.553103074353594 26.784383868601104 30.955387085705404 22.707125971339902 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 172.0 1 246.0 2 320.0 3 921.0 4 1522.0 5 1522.0 6 2638.5 7 3755.0 8 3969.5 9 4184.0 10 6339.0 11 8494.0 12 8494.0 13 14794.0 14 21094.0 15 35061.0 16 49028.0 17 48514.5 18 48001.0 19 48001.0 20 51650.0 21 55299.0 22 45784.0 23 36269.0 24 40434.5 25 44600.0 26 44600.0 27 48822.0 28 53044.0 29 55730.0 30 58416.0 31 62491.5 32 66567.0 33 66567.0 34 72187.5 35 77808.0 36 85458.5 37 93109.0 38 97138.5 39 101168.0 40 101168.0 41 106930.0 42 112692.0 43 125334.5 44 137977.0 45 167080.0 46 196183.0 47 196183.0 48 200317.5 49 204452.0 50 186840.0 51 169228.0 52 159434.5 53 149641.0 54 149641.0 55 131937.5 56 114234.0 57 97771.5 58 81309.0 59 71974.0 60 62639.0 61 62639.0 62 55811.5 63 48984.0 64 43269.0 65 37554.0 66 31951.5 67 26349.0 68 26349.0 69 22215.0 70 18081.0 71 15132.0 72 12183.0 73 9490.5 74 6798.0 75 6798.0 76 5190.0 77 3582.0 78 2894.0 79 2206.0 80 1749.0 81 1292.0 82 1292.0 83 989.0 84 686.0 85 570.5 86 455.0 87 394.5 88 334.0 89 334.0 90 274.0 91 214.0 92 121.0 93 28.0 94 20.0 95 12.0 96 12.0 97 10.0 98 8.0 99 4.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2109972.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.74057446277504 #Duplication Level Percentage of deduplicated Percentage of total 1 75.28112712230053 32.9283974653462 2 13.293780187331606 11.62955164351483 3 4.789008249975976 6.284219158827545 4 2.130677863944431 3.727882950561914 5 1.1163677867564412 2.441528415223175 6 0.6853347161117543 1.798616050920659 7 0.4325518387535054 1.3244046138405579 8 0.30781563584470645 1.0771226192377463 9 0.2399942514284117 0.9447737782718157 >10 1.447017794486309 12.075928376956973 >50 0.15721602879582747 4.774667552191807 >100 0.10552529224065865 8.698663463357029 >500 0.006519951374258482 1.9242953593646743 >1k 0.0059766220930702755 4.722496967396235 >5k 6.519951374258482E-4 1.763450219285878 >10k+ 4.346634249505655E-4 3.8840013657029604 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 24542 1.163143397163564 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 23859 1.1307732993613187 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 21731 1.0299188804401196 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 11583 0.5489646308102667 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7707 0.36526551063236856 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6461 0.30621259429035075 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 6064 0.2873971787303339 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 5946 0.28180468745556814 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5895 0.27938759376901684 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 5028 0.23829700109764487 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 4945 0.2343632996077673 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 4449 0.21085587865620967 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 4319 0.20469465945519658 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3733 0.1769217790567837 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3590 0.17014443793566927 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3338 0.1582011514844747 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 3199 0.15161338633877605 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2999 0.1421345875679867 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 2608 0.12360353597109346 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2591 0.12279783807557636 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2306 0.10929054982720149 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2210 0.1047407264172226 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2119 0.10042787297651343 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 4.739399385394688E-5 0.0 4 0.0 0.0 0.0 9.478798770789376E-5 0.0 5 0.0 0.0 0.0 9.478798770789376E-5 0.0 6 0.0 0.0 0.0 9.478798770789376E-5 0.0 7 0.0 0.0 0.0 9.478798770789376E-5 0.0 8 4.739399385394688E-5 0.0 0.0 9.478798770789376E-5 0.0 9 4.739399385394688E-5 0.0 0.0 9.478798770789376E-5 0.0 10 4.739399385394688E-5 4.739399385394688E-5 0.0 1.8957597541578752E-4 0.0 11 4.739399385394688E-5 4.739399385394688E-5 0.0 2.843639631236813E-4 0.0 12 4.739399385394688E-5 9.478798770789376E-5 0.0 5.213339323934156E-4 0.0 13 4.739399385394688E-5 9.478798770789376E-5 0.0 5.687279262473625E-4 0.0 14 4.739399385394688E-5 9.478798770789376E-5 0.0 6.635159139552562E-4 0.0 15 9.478798770789376E-5 9.478798770789376E-5 0.0 9.952738709328845E-4 0.0 16 9.478798770789376E-5 9.478798770789376E-5 0.0 0.001564001797180247 0.0 17 9.478798770789376E-5 9.478798770789376E-5 0.0 0.001990547741865769 0.0 18 9.478798770789376E-5 9.478798770789376E-5 0.0 0.00227491170498945 0.0 19 9.478798770789376E-5 9.478798770789376E-5 0.0 0.002606669661967078 0.0 20 9.478798770789376E-5 9.478798770789376E-5 0.0 0.0032227915820683874 0.0 21 9.478798770789376E-5 9.478798770789376E-5 0.0 0.004265459446855219 0.0 22 9.478798770789376E-5 1.4218198156184064E-4 0.0 0.007725220998193341 0.0 23 9.478798770789376E-5 1.4218198156184064E-4 0.0 0.012938560322127498 0.0 24 9.478798770789376E-5 1.4218198156184064E-4 0.0 0.0212325092465682 0.0 25 9.478798770789376E-5 1.4218198156184064E-4 0.0 0.026635424545918145 0.0 26 9.478798770789376E-5 1.4218198156184064E-4 0.0 0.0348819794765049 0.0 27 9.478798770789376E-5 1.4218198156184064E-4 0.0 0.09748944535756873 0.0 28 9.478798770789376E-5 1.4218198156184064E-4 0.0 0.16422018870392593 0.0 29 9.478798770789376E-5 1.4218198156184064E-4 0.0 0.24715967794833296 0.0 30 9.478798770789376E-5 1.4218198156184064E-4 0.0 0.3886307496023644 0.0 31 9.478798770789376E-5 1.4218198156184064E-4 0.0 0.5942258949407859 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5715 0.0 27.321083 1 TAGTGCG 65 2.684612E-6 22.76923 7 GGCGTAA 70 5.1052593E-6 21.142859 19 TATAGCG 45 0.0038268527 20.555555 5 GTATTGG 760 0.0 19.717106 1 CGAACGA 130 6.9667294E-10 18.5 16 ACGATCG 50 0.0070367823 18.5 8 ATTGGAC 730 0.0 18.246574 3 TTGGACC 1185 0.0 16.86076 4 TGGACCC 1190 0.0 16.789917 5 GGACCCT 1230 0.0 16.544716 6 GTATCAA 9900 0.0 15.75303 2 AGTGCGC 95 7.064149E-5 15.578948 8 TATTGGA 970 0.0 15.448455 2 ACGAACG 145 5.3520125E-8 15.310345 15 CGTCGCA 100 1.09405155E-4 14.8 11 AACACCG 75 0.0041059176 14.8 5 GTACCGT 90 8.278057E-4 14.388888 6 GCGCTAG 90 8.278057E-4 14.388888 11 CGTAACG 105 1.6566658E-4 14.095239 21 >>END_MODULE