##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088383_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1050974 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.37598170839621 31.0 31.0 34.0 30.0 34.0 2 31.60814825105093 31.0 31.0 34.0 30.0 34.0 3 31.68940430495902 31.0 31.0 34.0 30.0 34.0 4 35.48159802240588 37.0 35.0 37.0 33.0 37.0 5 35.32108406107097 37.0 35.0 37.0 33.0 37.0 6 35.37426044792735 37.0 35.0 37.0 33.0 37.0 7 35.23362994707767 37.0 35.0 37.0 32.0 37.0 8 35.274747044170454 37.0 35.0 37.0 32.0 37.0 9 36.75130878594523 39.0 37.0 39.0 32.0 39.0 10 36.66253970126758 39.0 35.0 39.0 32.0 39.0 11 36.77511432252368 39.0 37.0 39.0 32.0 39.0 12 36.63108031216757 39.0 35.0 39.0 32.0 39.0 13 36.659747053685436 39.0 35.0 39.0 32.0 39.0 14 37.64136696055278 39.0 36.0 41.0 32.0 41.0 15 37.62597457215878 39.0 36.0 41.0 32.0 41.0 16 37.57977171652201 39.0 36.0 41.0 32.0 41.0 17 37.6775581508201 39.0 37.0 41.0 32.0 41.0 18 37.667985126178195 39.0 37.0 41.0 32.0 41.0 19 37.751842576505226 40.0 37.0 41.0 32.0 41.0 20 37.72227666907079 39.0 37.0 41.0 32.0 41.0 21 37.66521721755248 39.0 37.0 41.0 32.0 41.0 22 37.556386742202946 39.0 36.0 41.0 32.0 41.0 23 37.427022933012616 39.0 36.0 41.0 32.0 41.0 24 37.36432870841715 39.0 36.0 41.0 32.0 41.0 25 37.30916844755436 39.0 36.0 41.0 31.0 41.0 26 37.073927613813474 39.0 36.0 41.0 31.0 41.0 27 36.93627815721417 39.0 35.0 40.0 31.0 41.0 28 36.81575757345092 39.0 35.0 40.0 31.0 41.0 29 36.66114290172735 39.0 35.0 40.0 30.0 41.0 30 36.47452172936723 38.0 35.0 40.0 30.0 41.0 31 36.184117780268586 38.0 35.0 40.0 30.0 41.0 32 36.033529849453934 38.0 35.0 40.0 30.0 41.0 33 36.04692694586165 38.0 35.0 40.0 30.0 41.0 34 35.97343987577238 38.0 35.0 40.0 30.0 41.0 35 35.87431563483017 38.0 35.0 40.0 29.0 41.0 36 35.78532009355131 38.0 35.0 40.0 29.0 41.0 37 35.6481302106427 38.0 35.0 40.0 27.0 41.0 38 35.51057019488589 38.0 34.0 40.0 27.0 41.0 39 35.42192670798707 38.0 34.0 40.0 26.0 41.0 40 35.226095983344976 38.0 34.0 40.0 25.0 41.0 41 35.04178219442156 38.0 34.0 40.0 24.0 41.0 42 34.85191070378525 38.0 34.0 40.0 24.0 41.0 43 34.51553606464099 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 1.0 15 3.0 16 9.0 17 29.0 18 66.0 19 121.0 20 285.0 21 579.0 22 1121.0 23 1932.0 24 3300.0 25 5234.0 26 7938.0 27 11873.0 28 17013.0 29 23391.0 30 30493.0 31 37137.0 32 45059.0 33 55932.0 34 68941.0 35 83533.0 36 106907.0 37 148115.0 38 187243.0 39 214718.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.89742086864185 22.2064484944442 13.760759067303283 22.135371569610665 2 17.904819719612476 22.722921784934734 36.64771916336655 22.724539332086234 3 19.855867033818154 26.175243155396803 32.32715557187904 21.641734238906004 4 12.698125738600574 15.538538536633636 35.22361162121994 36.53972410354586 5 11.359272446321222 40.34400470420771 34.4626984111881 13.834024438282963 6 31.332744673036633 35.87386557612272 15.612565106272847 17.180824644567803 7 24.80289712209817 35.14330516263961 21.320508404584697 18.733289310677524 8 28.054071746779652 33.03012253395422 20.221432690057036 18.694373029209096 9 25.546493062625718 13.487869347862077 23.658434937496075 37.30720265201613 10 16.531427038156984 27.264518437183032 33.406535271091386 22.797519253568595 11 31.293067192908673 21.68873825613193 25.32403275437832 21.694161796581078 12 20.646371841739185 27.31599449653369 31.549686291002445 20.48794737072468 13 31.24606317568275 20.821257233766012 28.81669765379543 19.11598193675581 14 21.18996283447545 22.43671108895177 28.262735329323085 28.11059074724969 15 23.065175732225534 28.522684671552295 27.242063076726925 21.170076519495247 16 21.86733449162396 28.284334341287227 27.1321650202574 22.716166146831416 17 19.374408881665957 26.809797387946798 27.8418876204359 25.97390610995134 18 20.74808701261877 25.966008673858727 32.55066252828328 20.735241785239218 19 19.874992150138823 24.359689202587315 33.869914955079764 21.895403692194098 20 24.645424149408075 23.21684456513672 32.54171844403382 19.596012841421388 21 24.10858879477513 24.25968672869167 31.16718396458904 20.46454051194416 22 22.20730484293617 23.860533181601067 32.23695353072483 21.69520844473793 23 20.932867987219474 25.895597797852275 33.51862177370706 19.65291244122119 24 19.692494771516706 24.982920605076814 31.801643047306595 23.522941576099885 25 20.91022232709848 25.98151809654663 32.8557128910896 20.252546685265287 26 22.578769788786403 24.894336111074107 31.395448412615345 21.131445687524145 27 20.991004534841014 26.492662996420464 30.96460997132184 21.55172249741668 28 20.67824703560697 25.75715479165041 31.18088554046056 22.383712632282055 29 19.56299584956431 25.859155412027317 32.40023064319384 22.177618095214534 30 19.16888524359309 26.16220762835237 34.10179509673883 20.567112031315713 31 20.43885005718505 25.565713328778827 33.01965605238569 20.97578056165043 32 21.835078698426415 25.657342617419648 30.685154913442197 21.82242377071174 33 22.669637878767695 25.425652775425462 30.48543541514823 21.41927393065861 34 20.788430541573817 28.569878988443104 30.39551882349135 20.24617164649173 35 19.52160567245241 29.617098044290348 30.558795935960358 20.30250034729689 36 20.305259692437684 25.803873359379015 32.85714013857622 21.03372680960709 37 20.69137771248385 26.121578649899995 31.631895746231592 21.555147891384564 38 20.85103913132009 25.510811875460288 32.449898855728115 21.188250137491508 39 21.837076844907678 25.042579550017415 32.357698668092645 20.762644936982266 40 20.05168538898203 25.85335127224841 31.389929722333758 22.705033616435802 41 21.012508396972713 25.433169612188312 31.287263053129767 22.267058937709212 42 18.59827169844354 27.129215375451725 31.85016946185158 22.42234346425316 43 19.150521325931948 26.93177947313635 31.40648579317852 22.51121340775319 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 75.0 1 115.0 2 155.0 3 464.5 4 774.0 5 774.0 6 1382.0 7 1990.0 8 2217.0 9 2444.0 10 3632.0 11 4820.0 12 4820.0 13 8781.5 14 12743.0 15 20929.0 16 29115.0 17 28562.0 18 28009.0 19 28009.0 20 29300.5 21 30592.0 22 24041.5 23 17491.0 24 19321.0 25 21151.0 26 21151.0 27 22734.5 28 24318.0 29 25160.0 30 26002.0 31 27808.0 32 29614.0 33 29614.0 34 31905.0 35 34196.0 36 37769.5 37 41343.0 38 43475.0 39 45607.0 40 45607.0 41 48008.0 42 50409.0 43 58540.5 44 66672.0 45 86042.5 46 105413.0 47 105413.0 48 107141.5 49 108870.0 50 99234.0 51 89598.0 52 84993.0 53 80388.0 54 80388.0 55 69747.0 56 59106.0 57 48526.5 58 37947.0 59 33668.0 60 29389.0 61 29389.0 62 25773.0 63 22157.0 64 19452.5 65 16748.0 66 14437.5 67 12127.0 68 12127.0 69 10171.5 70 8216.0 71 7026.0 72 5836.0 73 4559.5 74 3283.0 75 3283.0 76 2569.0 77 1855.0 78 1462.5 79 1070.0 80 839.5 81 609.0 82 609.0 83 458.5 84 308.0 85 268.5 86 229.0 87 194.0 88 159.0 89 159.0 90 134.5 91 110.0 92 66.5 93 23.0 94 16.0 95 9.0 96 9.0 97 6.5 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1050974.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.4377158501068 #Duplication Level Percentage of deduplicated Percentage of total 1 81.19291360272743 40.139921917339095 2 10.807648472571556 10.686109083896666 3 3.1703456050488423 4.702039355071188 4 1.3473118242693352 2.6643207651886565 5 0.7550474586823258 1.8663910857841037 6 0.4949574762885918 1.4681740242384822 7 0.33635642602483995 1.1640085389921455 8 0.23377496621752447 0.9245840282184232 9 0.2033310606105447 0.9047000878168456 >10 1.264710188751612 12.05218178946491 >50 0.11601076451633069 3.949289331225556 >100 0.06272997558794272 5.655969539307557 >500 0.008685688852515786 3.0684968123199643 >1k 0.005404428619343156 5.981168911684164 >5k 1.9301530783368418E-4 0.7260687329335015 >10k+ 5.790459235010525E-4 4.046575996518728 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 14907 1.4183985522001497 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14089 1.340565989263293 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13411 1.2760544028681966 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7609 0.7239950750446729 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4799 0.45662404588505523 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4274 0.406670383853454 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4109 0.3909706615006651 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 4058 0.3861180200461667 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 3941 0.37498548965055273 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 3325 0.3163731928668074 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 3285 0.31256719956916157 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 2728 0.25956874289944376 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 2723 0.25909299373723804 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2515 0.23930182858947985 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2513 0.23911152892459758 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2059 0.1959135049963177 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 1990 0.1893481665578787 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1821 0.17326784487532518 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1761 0.16755885492885647 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 1618 0.1539524288897727 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1613 0.153476679727567 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1549 0.14738709045133372 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1447 0.13768180754233691 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1429 0.1359691105583963 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1316 0.1252171794925469 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 1194 0.11360889993472723 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 1139 0.10837565915046424 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1124 0.10694841166384707 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 1113 0.10590176350699446 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1104 0.10504541501502415 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 1075 0.10228606987423094 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 1059 0.10076367255517263 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 5.708989946468704E-4 0.0 12 0.0 0.0 0.0 0.0011417979892937408 0.0 13 9.514983244114507E-5 0.0 9.514983244114507E-5 0.0012369478217348858 0.0 14 9.514983244114507E-5 0.0 9.514983244114507E-5 0.0015223973190583212 0.0 15 9.514983244114507E-5 0.0 9.514983244114507E-5 0.0024738956434697717 0.0 16 9.514983244114507E-5 0.0 9.514983244114507E-5 0.004091442794969238 0.0 17 9.514983244114507E-5 0.0 9.514983244114507E-5 0.005994439443792139 0.0 18 9.514983244114507E-5 0.0 9.514983244114507E-5 0.007136237433085881 0.0 19 9.514983244114507E-5 0.0 9.514983244114507E-5 0.008468335087261912 0.0 20 9.514983244114507E-5 0.0 9.514983244114507E-5 0.010561631400967103 0.0 21 9.514983244114507E-5 0.0 9.514983244114507E-5 0.015128823358142066 0.0 22 9.514983244114507E-5 0.0 9.514983244114507E-5 0.025405005261785733 0.0 23 9.514983244114507E-5 0.0 9.514983244114507E-5 0.044910720912220474 0.0 24 9.514983244114507E-5 0.0 9.514983244114507E-5 0.06955452751447705 0.0 25 9.514983244114507E-5 0.0 1.9029966488229015E-4 0.07821316226662124 0.0 26 9.514983244114507E-5 0.0 1.9029966488229015E-4 0.09124868931105812 0.0 27 9.514983244114507E-5 0.0 1.9029966488229015E-4 0.1657510081124747 0.0 28 9.514983244114507E-5 0.0 1.9029966488229015E-4 0.24757986401185947 0.0 29 9.514983244114507E-5 0.0 1.9029966488229015E-4 0.34482299276670975 0.0 30 9.514983244114507E-5 0.0 1.9029966488229015E-4 0.5255125245724442 0.0 31 9.514983244114507E-5 0.0 1.9029966488229015E-4 0.769952444113746 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3605 0.0 28.070736 1 ATTGGAC 375 0.0 25.653336 3 ACGTTTA 45 1.3231071E-4 24.666666 26 CCGTATA 40 0.0019310778 23.125 2 GTATTGG 495 0.0 22.42424 1 ATCACGT 50 2.7018884E-4 22.2 23 TAGACTG 90 9.476389E-8 20.555555 5 TCGCTAC 45 0.003825594 20.555555 27 TATTGGA 550 0.0 19.50909 2 TTGGACC 740 0.0 18.75 4 CGGAAAT 60 9.2360954E-4 18.5 25 TTAGATC 50 0.0070344904 18.5 3 CGTCTGT 310 0.0 18.5 34 TCTATAC 50 0.0070344904 18.5 3 GGACTGA 115 6.4033884E-8 17.695652 6 TGGACCC 755 0.0 17.642385 5 GGACCCT 755 0.0 17.642385 6 GTTCTAC 65 0.0015798119 17.076923 1 TGCGTCT 340 0.0 16.867645 32 GTATCAA 6240 0.0 16.276443 2 >>END_MODULE