##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088380_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 963192 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.339947798569757 31.0 31.0 34.0 30.0 34.0 2 31.558685080440867 31.0 31.0 34.0 30.0 34.0 3 31.637675562089385 31.0 31.0 34.0 30.0 34.0 4 35.447664640071764 37.0 35.0 37.0 33.0 37.0 5 35.29178294670221 37.0 35.0 37.0 33.0 37.0 6 35.353475734848296 37.0 35.0 37.0 32.0 37.0 7 35.196011802423605 37.0 35.0 37.0 32.0 37.0 8 35.24164237244496 37.0 35.0 37.0 32.0 37.0 9 36.70368732298441 39.0 35.0 39.0 32.0 39.0 10 36.615695520726916 39.0 35.0 39.0 32.0 39.0 11 36.732143747041086 39.0 35.0 39.0 32.0 39.0 12 36.58879745678951 39.0 35.0 39.0 32.0 39.0 13 36.61168282128589 39.0 35.0 39.0 32.0 39.0 14 37.55458205632937 39.0 36.0 41.0 32.0 41.0 15 37.53532836651467 39.0 36.0 41.0 32.0 41.0 16 37.49534153107584 39.0 36.0 41.0 32.0 41.0 17 37.61363570295434 39.0 36.0 41.0 32.0 41.0 18 37.620212792465054 39.0 36.0 41.0 32.0 41.0 19 37.71654353441474 39.0 37.0 41.0 32.0 41.0 20 37.68900489206721 39.0 37.0 41.0 32.0 41.0 21 37.64088883628602 39.0 37.0 41.0 32.0 41.0 22 37.54187223315808 39.0 36.0 41.0 32.0 41.0 23 37.40693651940631 39.0 36.0 41.0 32.0 41.0 24 37.33400817282536 39.0 36.0 41.0 31.0 41.0 25 37.281846194735834 39.0 36.0 41.0 31.0 41.0 26 37.03345854201447 39.0 36.0 41.0 31.0 41.0 27 36.88929829151405 39.0 35.0 40.0 31.0 41.0 28 36.768196787348735 39.0 35.0 40.0 30.0 41.0 29 36.59864388408542 38.0 35.0 40.0 30.0 41.0 30 36.39926722813313 38.0 35.0 40.0 30.0 41.0 31 36.088122617297486 38.0 35.0 40.0 30.0 41.0 32 35.93021225259346 38.0 35.0 40.0 30.0 41.0 33 35.91786788096247 38.0 35.0 40.0 30.0 41.0 34 35.82475975714084 38.0 35.0 40.0 29.0 41.0 35 35.71017927889766 38.0 35.0 40.0 29.0 41.0 36 35.61422852349272 38.0 35.0 40.0 27.0 41.0 37 35.465794981685896 38.0 34.0 40.0 27.0 41.0 38 35.316985606192745 38.0 34.0 40.0 26.0 41.0 39 35.20938608294089 38.0 34.0 40.0 25.0 41.0 40 34.97405190242444 38.0 34.0 40.0 24.0 41.0 41 34.77795704283258 38.0 33.0 40.0 23.0 41.0 42 34.55908686949227 38.0 33.0 40.0 23.0 41.0 43 34.21179577903471 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 3.0 16 9.0 17 17.0 18 47.0 19 127.0 20 311.0 21 567.0 22 1077.0 23 1888.0 24 3147.0 25 5074.0 26 7805.0 27 11587.0 28 16421.0 29 22326.0 30 28638.0 31 34849.0 32 42574.0 33 52265.0 34 64067.0 35 78413.0 36 99351.0 37 137370.0 38 168557.0 39 186701.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.74754358424904 22.431872357743835 14.18170001411972 21.63888404388741 2 17.79385626126463 22.764723959501325 36.73639315941163 22.705026619822423 3 19.93548534456266 26.01724266812847 32.93860414123041 21.108667846078454 4 12.445182268955723 15.369832805920314 34.8774699125408 37.30751501258316 5 11.124054186496565 40.684619473583666 34.24436664756352 13.946959692356248 6 31.18775903454348 35.45855862590221 15.437628219503486 17.91605412005083 7 24.37541009476823 36.04463076935855 20.701376257277886 18.87858287859534 8 28.718469422503507 32.511690296431034 19.963101853005423 18.806738428060033 9 25.58856385850381 13.3710620520104 23.856198971752256 37.18417511773354 10 16.70549589282303 27.447694748295255 32.931544281929256 22.915265076952466 11 30.92633659748005 21.416809940281897 25.647742090881152 22.009111371356905 12 20.869151737140673 27.49815197800646 31.423641392370367 20.209054892482495 13 31.947835945481273 20.61582737398151 29.110499256638345 18.325837423898868 14 21.126109851410728 22.443708004219303 28.718469422503507 27.711712721866462 15 23.262236397312268 28.332253590146095 27.63446955539498 20.771040457146654 16 21.68591516540835 28.254283673452434 27.352490469189945 22.707310691949267 17 19.056948147409862 26.670072010564873 27.800480070432478 26.47249977159279 18 20.42946785272303 25.868674158423243 33.24986087924318 20.451997109610545 19 19.486146064336083 24.013384662663313 34.66027541756991 21.84019385543069 20 25.031354081013962 22.513060739707143 33.23989401905331 19.215691160225585 21 24.22300019103149 23.909147916510936 31.813179511457733 20.05467238099984 22 21.990838794342146 23.34093306422811 32.97006204370469 21.698166097725064 23 20.698053970547928 25.635491158564438 34.4382013139644 19.22825355692323 24 19.077504796551466 24.560523758502978 32.51023679598668 23.851734648958878 25 20.549381639382386 25.820604822299188 33.851921527587436 19.778092010730987 26 22.462084402694373 24.452964725620642 32.059755479696676 21.025195391988305 27 20.617696160267112 26.437511939467935 31.482923446208027 21.461868454056926 28 20.204279105308185 25.713668718178724 31.609170341946363 22.47288183456673 29 19.09058630055067 25.76485269811211 32.96777797157784 22.176783029759385 30 18.36352461399181 26.0389413533335 35.32172194121214 20.27581209146255 31 20.21154660752996 25.332332494455933 33.67002632912233 20.78609456889177 32 21.68404637912275 25.538937200475086 31.277564597712605 21.499451822689558 33 22.900730072508907 25.312710238457132 30.656089336290172 21.130470352743792 34 20.447948072658413 29.021731908072322 30.769462370949924 19.760857648319337 35 18.75202451847607 30.136670570353573 31.117160441531905 19.994144469638453 36 19.94877449148249 25.64826119818271 33.739690528991105 20.6632737813437 37 20.31391456739674 26.137467919168767 32.372881003995055 21.175736509439446 38 20.516158772082825 25.538833379014775 33.108248407378795 20.8367594415236 39 21.962391714216896 24.923379762290384 32.77736941336722 20.3368591101255 40 19.736148140765287 25.964501366290417 31.688282294703445 22.61106819824085 41 21.043571790463375 25.369292934326698 31.547188930140617 22.03994634506931 42 18.041158979725747 27.440531067533787 32.31391041453833 22.204399538202143 43 18.953438151479663 27.25126454538659 31.5778162609324 22.21748104220135 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 35.0 1 80.5 2 126.0 3 425.0 4 724.0 5 724.0 6 1311.0 7 1898.0 8 2098.5 9 2299.0 10 3574.5 11 4850.0 12 4850.0 13 8618.0 14 12386.0 15 21098.5 16 29811.0 17 28997.0 18 28183.0 19 28183.0 20 29417.0 21 30651.0 22 23575.5 23 16500.0 24 17921.5 25 19343.0 26 19343.0 27 20264.0 28 21185.0 29 21476.5 30 21768.0 31 23214.0 32 24660.0 33 24660.0 34 26752.5 35 28845.0 36 32014.5 37 35184.0 38 36940.5 39 38697.0 40 38697.0 41 41744.5 42 44792.0 43 53052.5 44 61313.0 45 82718.0 46 104123.0 47 104123.0 48 105670.5 49 107218.0 50 96402.0 51 85586.0 52 79763.0 53 73940.0 54 73940.0 55 63337.5 56 52735.0 57 42471.5 58 32208.0 59 27982.5 60 23757.0 61 23757.0 62 21181.5 63 18606.0 64 16390.0 65 14174.0 66 12191.5 67 10209.0 68 10209.0 69 8544.5 70 6880.0 71 5772.0 72 4664.0 73 3666.5 74 2669.0 75 2669.0 76 2039.0 77 1409.0 78 1089.5 79 770.0 80 606.0 81 442.0 82 442.0 83 328.5 84 215.0 85 184.5 86 154.0 87 129.0 88 104.0 89 104.0 90 80.5 91 57.0 92 35.0 93 13.0 94 10.0 95 7.0 96 7.0 97 4.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 963192.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.784894758104194 #Duplication Level Percentage of deduplicated Percentage of total 1 80.60619993974306 36.90546381091841 2 10.820060423132443 9.907906554988944 3 3.3533877553898854 4.606035163909235 4 1.448421415281305 2.6526328825615555 5 0.7932206830575164 1.8158762746869956 6 0.5272449843138384 1.4483913671128434 7 0.3490490307074034 1.118682119544972 8 0.2604983218022801 0.9541510598704124 9 0.22029580099039445 0.9077598057597728 >10 1.3953032529820195 12.385304436939636 >50 0.13000847496373377 4.136039076714618 >100 0.07786759298807591 6.708024907764923 >500 0.010928784976599031 3.8173268278486696 >1k 0.006602807590028581 7.109678699935415 >5k 2.2768302034581318E-4 0.8900389539903313 >10k+ 6.830490610374395E-4 4.636688057453261 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 15817 1.6421440377411771 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14858 1.5425792573028014 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13804 1.4331514381348682 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 8538 0.8864276281364464 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4888 0.5074792980008139 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 4553 0.4726991087965847 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 4455 0.4625246056860937 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4429 0.45982524771800426 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4013 0.4166355202285733 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 3767 0.3910954409920348 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 3565 0.37012350600918614 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3135 0.3254802780753993 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 2924 0.3035739499497504 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2774 0.2880007309030806 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2593 0.2692090465867657 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2406 0.24979443350858394 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2270 0.23567471490626998 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1948 0.20224420468608542 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1909 0.19819516773395127 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 1806 0.18750155732190468 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1635 0.16974808760870108 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1587 0.16476465751376673 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1579 0.16393408583127766 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1533 0.1591582986569656 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1518 0.15760097675229862 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 1231 0.12780421764300368 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1223 0.12697364596051464 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1169 0.12136728710371349 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 1119 0.11617621408815687 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 1064 0.11046603377104461 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 1056 0.10963546208855555 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 1041 0.10807814018388857 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 1012 0.10506731783486575 No Hit ATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAG 988 0.10257560278739858 No Hit CGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAG 987 0.10247178132708744 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 981 0.10184885256522064 No Hit CTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTG 965 0.10018770920024252 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 1.0382146031113215E-4 0.0 8 1.0382146031113215E-4 0.0 0.0 1.0382146031113215E-4 0.0 9 1.0382146031113215E-4 0.0 0.0 1.0382146031113215E-4 0.0 10 1.0382146031113215E-4 0.0 0.0 3.1146438093339644E-4 0.0 11 1.0382146031113215E-4 0.0 0.0 8.305716824890572E-4 0.0 12 1.0382146031113215E-4 0.0 0.0 0.0012458575237335858 0.0 13 1.0382146031113215E-4 0.0 0.0 0.0012458575237335858 0.0 14 1.0382146031113215E-4 0.0 0.0 0.001972607745911511 0.0 15 2.076429206222643E-4 0.0 0.0 0.0030108223490228326 0.0 16 3.1146438093339644E-4 0.0 0.0 0.004983430094934343 0.0 17 4.152858412445286E-4 0.0 0.0 0.007267502221779251 0.0 18 4.152858412445286E-4 0.0 0.0 0.007786609523334912 0.0 19 4.152858412445286E-4 0.0 0.0 0.009240109967690762 0.0 20 4.152858412445286E-4 0.0 0.0 0.011420360634224537 0.0 21 4.152858412445286E-4 0.0 0.0 0.015261754665736427 0.0 22 4.152858412445286E-4 0.0 0.0 0.025332436315916244 0.0 23 4.152858412445286E-4 0.0 0.0 0.044331763552853426 0.0 24 4.152858412445286E-4 0.0 0.0 0.0648884126944576 0.0 25 4.152858412445286E-4 0.0 0.0 0.07599730894774874 0.0 26 4.152858412445286E-4 0.0 0.0 0.08606799059792855 0.0 27 4.152858412445286E-4 0.0 0.0 0.1678793013231007 0.0 28 4.152858412445286E-4 0.0 0.0 0.2515593983338732 0.0 29 4.152858412445286E-4 0.0 0.0 0.3551732157243831 0.0 30 4.152858412445286E-4 0.0 0.0 0.5417403799034876 0.0 31 4.152858412445286E-4 0.0 0.0 0.7708743428101562 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATACGC 25 0.0054959077 29.599998 10 GGTATCA 3730 0.0 28.965149 1 ATTGGAC 305 0.0 25.475409 3 GTATTGG 330 0.0 22.984848 1 CGCTCTA 50 2.7016623E-4 22.199999 14 TATACCG 70 5.1005045E-6 21.142859 5 ACCCGTG 45 0.0038253653 20.555555 16 TATTGGA 390 0.0 19.923077 2 TTGGACC 625 0.0 19.536 4 CGACGAG 80 1.6162277E-5 18.5 24 CATCGGG 70 1.2189367E-4 18.5 21 CGGTTTA 100 2.8737304E-7 18.499998 15 TCTATGC 50 0.007034076 18.499998 3 GTATCAA 6310 0.0 17.122028 2 TGGACCC 725 0.0 17.096552 5 TAGGTCG 65 0.0015796822 17.076923 5 GACCCTC 695 0.0 17.03597 7 GGACCCT 710 0.0 16.93662 6 TGTTCTA 80 3.3818546E-4 16.1875 5 ATAGAAC 70 0.002592084 15.857143 3 >>END_MODULE