##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088379_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 792483 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.4563605780818 31.0 31.0 34.0 30.0 34.0 2 31.66229559498437 31.0 31.0 34.0 30.0 34.0 3 31.749794001890262 31.0 31.0 34.0 30.0 34.0 4 35.528594304231135 37.0 35.0 37.0 33.0 37.0 5 35.347988537293546 37.0 35.0 37.0 33.0 37.0 6 35.3752850218869 37.0 35.0 37.0 33.0 37.0 7 35.259493263577895 37.0 35.0 37.0 32.0 37.0 8 35.277850755158155 37.0 35.0 37.0 32.0 37.0 9 36.801497319185394 39.0 37.0 39.0 32.0 39.0 10 36.66734933115284 39.0 35.0 39.0 32.0 39.0 11 36.77669426347316 39.0 37.0 39.0 32.0 39.0 12 36.637338592752144 39.0 35.0 39.0 32.0 39.0 13 36.66723828776138 39.0 35.0 39.0 32.0 39.0 14 37.70681894753578 40.0 37.0 41.0 32.0 41.0 15 37.70336146011965 40.0 37.0 41.0 32.0 41.0 16 37.66033088406944 39.0 36.0 41.0 32.0 41.0 17 37.705881387991916 39.0 37.0 41.0 32.0 41.0 18 37.683406457930325 39.0 37.0 41.0 32.0 41.0 19 37.74000451744706 40.0 37.0 41.0 32.0 41.0 20 37.7051608678041 40.0 37.0 41.0 32.0 41.0 21 37.6464176518613 39.0 37.0 41.0 32.0 41.0 22 37.54655557280093 39.0 36.0 41.0 32.0 41.0 23 37.43642576560002 39.0 36.0 41.0 32.0 41.0 24 37.37187043759929 39.0 36.0 41.0 31.0 41.0 25 37.31016059650491 39.0 36.0 41.0 31.0 41.0 26 37.10175107857203 39.0 36.0 41.0 31.0 41.0 27 36.93738666949323 39.0 35.0 41.0 31.0 41.0 28 36.85584044074132 39.0 35.0 40.0 31.0 41.0 29 36.70699308376331 39.0 35.0 40.0 30.0 41.0 30 36.52556963367037 38.0 35.0 40.0 30.0 41.0 31 36.32003588720515 38.0 35.0 40.0 30.0 41.0 32 36.164607947426 38.0 35.0 40.0 30.0 41.0 33 36.2508104274792 38.0 35.0 40.0 30.0 41.0 34 36.22750393383833 38.0 35.0 40.0 30.0 41.0 35 36.167684354112325 38.0 35.0 40.0 30.0 41.0 36 36.08616967177845 38.0 35.0 40.0 29.0 41.0 37 35.97019999167175 38.0 35.0 40.0 29.0 41.0 38 35.86491066685342 38.0 35.0 40.0 28.0 41.0 39 35.83309168777122 38.0 35.0 40.0 28.0 41.0 40 35.69954812910813 38.0 35.0 40.0 27.0 41.0 41 35.58264467502773 38.0 35.0 40.0 27.0 41.0 42 35.43103258997354 38.0 34.0 40.0 26.0 41.0 43 35.106027511000235 38.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 3.0 16 5.0 17 12.0 18 45.0 19 119.0 20 232.0 21 426.0 22 770.0 23 1428.0 24 2362.0 25 3736.0 26 5938.0 27 8398.0 28 12184.0 29 16683.0 30 21437.0 31 26491.0 32 32831.0 33 40834.0 34 50406.0 35 61535.0 36 78388.0 37 107234.0 38 143727.0 39 177258.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.26195766975443 22.008800188773765 13.387921255093168 23.341320886378636 2 17.961394755471094 22.977779964996095 35.93553426382648 23.12529101570633 3 19.472720550472374 25.97645627729554 31.803205873185924 22.747617299046162 4 13.073088003149595 16.23656280323994 36.39497629602149 34.29537289758897 5 12.147516098137121 39.57548616184827 34.791534960371386 13.485462779643223 6 31.289125444962224 37.01215041836859 16.11731734308496 15.581406793584215 7 25.367484223636342 34.2175163378899 22.311014873505172 18.103984564968588 8 27.01357631646357 33.752143579105166 20.733315414967894 18.50096468946337 9 25.820238415208905 13.930645830888485 22.833802113105264 37.41531364079734 10 16.158832429212993 27.548477380587343 34.22256376477477 22.0701264254249 11 32.3474446770467 22.516571333391376 24.396611662332187 20.73937232722973 12 20.263904714675267 27.363615370929097 31.6703323604418 20.70214755395384 13 29.979191982667135 21.313517135383346 27.93346986623057 20.773821015718948 14 21.043479797042966 22.437579102643213 28.222182684044956 28.29675841626887 15 23.23254883700975 29.178165336038752 25.914499112283796 21.674786714667697 16 22.309753016783958 28.398464067998937 26.61836279137849 22.67342012383862 17 20.233746339038188 27.469358964167057 27.93586739400088 24.36102730279388 18 21.03855855583022 26.727765769107982 30.927982051349996 21.305693623711804 19 20.74050799827883 25.75071010986986 31.976711172353223 21.532070719498083 20 23.589528103441967 24.98943194995981 30.97429219301865 20.446747753579572 21 23.31986932211795 25.739605770723156 29.952692991521584 20.987831915637305 22 22.253978949706177 25.56572191453949 30.796622766671334 21.383676369082995 23 21.434781566292273 26.582021317807445 31.370136646464342 20.613060469435936 24 20.577980852586112 26.237282061571037 30.34727558824606 22.837461497596795 25 21.483110678714876 26.761962086252954 31.006469539409675 20.748457695622495 26 22.297765377932397 26.27526394887966 29.923544101261477 21.503426571926465 27 21.397052050327893 27.107458456522092 29.80972462500773 21.685764868142282 28 21.13748812277361 26.739753407959537 30.043168118432824 22.079590350834025 29 20.38315017483025 26.745684134549258 30.892019134795323 21.97914655582517 30 20.182514956156787 27.074019253409855 31.769261927385195 20.974203863048167 31 21.268847407452274 26.760574043859613 30.837506924438756 21.133071624249354 32 21.7714449395129 26.76625239910509 29.748524574028718 21.713778087353294 33 22.124638635781462 26.695714608389075 29.68946967947577 21.49017707635369 34 21.324747660202174 28.099908767759057 29.702214432360062 20.873129139678706 35 20.55955774445635 28.621560336310054 29.86259642162671 20.95628549760689 36 20.988462843997915 26.687260168356925 30.915742041154193 21.408534946490963 37 21.116919858217777 26.568771822234673 30.439769685911244 21.874538633636305 38 20.943162187706235 26.431103253949928 31.098080337370014 21.527654220973822 39 21.568412193069125 25.91109209913651 31.09227579645242 21.428219911341948 40 20.56586702806243 26.215325754621865 30.77554975942702 22.443257457888688 41 21.01470946379922 25.925729637102624 30.74362478438023 22.315936114717918 42 19.480796433488162 27.08474503554019 31.006469539409675 22.427988991561964 43 19.738089018944255 26.62997187321368 30.855425289880035 22.776513817962027 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 64.0 1 112.0 2 160.0 3 388.5 4 617.0 5 617.0 6 993.5 7 1370.0 8 1473.5 9 1577.0 10 2290.0 11 3003.0 12 3003.0 13 5167.5 14 7332.0 15 11683.5 16 16035.0 17 15930.0 18 15825.0 19 15825.0 20 17356.0 21 18887.0 22 16066.0 23 13245.0 24 15183.5 25 17122.0 26 17122.0 27 18938.0 28 20754.0 29 22158.0 30 23562.0 31 25571.0 32 27580.0 33 27580.0 34 30301.5 35 33023.0 36 36029.0 37 39035.0 38 40929.0 39 42823.0 40 42823.0 41 44444.0 42 46065.0 43 49219.5 44 52374.0 45 60511.0 46 68648.0 47 68648.0 48 68877.5 49 69107.0 50 63316.0 51 57525.0 52 54645.0 53 51765.0 54 51765.0 55 46747.0 56 41729.0 57 37106.0 58 32483.0 59 29268.0 60 26053.0 61 26053.0 62 23061.5 63 20070.0 64 17577.5 65 15085.0 66 12776.5 67 10468.0 68 10468.0 69 8907.5 70 7347.0 71 6147.0 72 4947.0 73 3920.5 74 2894.0 75 2894.0 76 2241.5 77 1589.0 78 1247.5 79 906.0 80 760.5 81 615.0 82 615.0 83 451.5 84 288.0 85 257.5 86 227.0 87 189.5 88 152.0 89 152.0 90 125.5 91 99.0 92 61.0 93 23.0 94 15.5 95 8.0 96 8.0 97 5.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 792483.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.03087315656239 #Duplication Level Percentage of deduplicated Percentage of total 1 83.65225286105856 49.38065527901831 2 9.726402033801968 11.48316009454189 3 2.726560256170667 4.828536979072048 4 1.1775941538127375 2.780576444945165 5 0.6012390156755294 1.7745832035559306 6 0.39943368414031394 1.4147351485767168 7 0.26294955716686597 1.0865499368984062 8 0.19799747929566525 0.9350371268497203 9 0.15603448846918808 0.8289766887186365 >10 0.9650428547704951 10.845704592206177 >50 0.08430023836364738 3.416048858718294 >100 0.044401833745471166 4.946368630298833 >500 0.0030030225705795794 1.3004097332166562 >1k 0.002145016121842557 2.199933661626698 >5k 6.435048365527671E-4 2.778723621756526 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7798 0.9839958712048081 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7351 0.9275908757664202 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6796 0.8575578277388916 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3244 0.40934632036270807 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2545 0.3211425355496585 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 1660 0.20946821572197763 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1633 0.20606120257469243 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 1611 0.20328511778801564 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1494 0.18852139414977986 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 1372 0.17312674215093574 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 1362 0.171864885429719 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 1275 0.16088673195513342 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 1178 0.1486467217593311 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 995 0.1255547437610649 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 983 0.12404051569560481 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 971 0.12252628763014474 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 929 0.11722648940103446 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 913 0.1152075186470877 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 1.2618567212167327E-4 0.0 6 1.2618567212167327E-4 0.0 0.0 1.2618567212167327E-4 0.0 7 1.2618567212167327E-4 0.0 0.0 1.2618567212167327E-4 0.0 8 1.2618567212167327E-4 0.0 0.0 1.2618567212167327E-4 0.0 9 1.2618567212167327E-4 0.0 0.0 1.2618567212167327E-4 0.0 10 1.2618567212167327E-4 0.0 0.0 1.2618567212167327E-4 0.0 11 1.2618567212167327E-4 0.0 0.0 2.5237134424334654E-4 0.0 12 1.2618567212167327E-4 0.0 0.0 7.571140327300396E-4 0.0 13 1.2618567212167327E-4 0.0 0.0 7.571140327300396E-4 0.0 14 2.5237134424334654E-4 0.0 0.0 7.571140327300396E-4 0.0 15 2.5237134424334654E-4 0.0 0.0 0.0010094853769733862 0.0 16 3.785570163650198E-4 0.0 0.0 0.0021451564260684458 0.0 17 3.785570163650198E-4 0.0 0.0 0.0030284561309201585 0.0 18 3.785570163650198E-4 0.0 0.0 0.0034070131472851784 1.2618567212167327E-4 19 3.785570163650198E-4 0.0 0.0 0.004668869868501911 1.2618567212167327E-4 20 3.785570163650198E-4 0.0 0.0 0.005425983901231951 1.2618567212167327E-4 21 3.785570163650198E-4 0.0 0.0 0.00769732599942207 1.2618567212167327E-4 22 3.785570163650198E-4 0.0 0.0 0.011735267507315614 1.2618567212167327E-4 23 3.785570163650198E-4 0.0 0.0 0.016656508720060872 1.2618567212167327E-4 24 3.785570163650198E-4 0.0 0.0 0.025489505768578002 1.2618567212167327E-4 25 3.785570163650198E-4 0.0 0.0 0.03003218996495824 1.2618567212167327E-4 26 3.785570163650198E-4 0.0 0.0 0.0387390013413537 1.2618567212167327E-4 27 3.785570163650198E-4 0.0 0.0 0.1029675084512854 1.2618567212167327E-4 28 3.785570163650198E-4 0.0 0.0 0.15684879044723987 1.2618567212167327E-4 29 3.785570163650198E-4 0.0 0.0 0.23495772149055563 1.2618567212167327E-4 30 3.785570163650198E-4 0.0 0.0 0.36783123423467756 1.2618567212167327E-4 31 3.785570163650198E-4 0.0 0.0 0.5849967759560772 1.2618567212167327E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1820 0.0 27.64835 1 CGCAATA 50 9.086434E-6 25.900002 36 GTATTGG 170 0.0 23.941177 1 CGACGAG 40 0.0019306607 23.125 24 ATTGGAC 185 0.0 23.000002 3 CTAGCGG 60 3.7244077E-5 21.583332 29 TTGGACC 310 0.0 20.290321 4 TCTAGCG 65 6.8986745E-5 19.923077 28 GCAATAC 75 9.259818E-6 19.733334 37 GTATAAC 50 0.0070330002 18.5 1 TAGGAAC 200 0.0 18.5 37 GTAACAC 70 1.2185912E-4 18.5 3 GGACCCT 295 0.0 18.186441 6 CGTCTCT 75 2.0662458E-4 17.266666 10 AAGCGTG 65 0.0015793489 17.076923 7 GACCCTC 300 0.0 16.65 7 TCTTGCG 90 4.443153E-5 16.444445 2 TGGACCC 360 0.0 16.444445 5 GTATTAG 125 1.6556805E-7 16.279999 1 TTAAGGG 70 0.0025915413 15.857142 3 >>END_MODULE