##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088376_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3413864 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.3542337949022 31.0 31.0 34.0 30.0 34.0 2 31.55888811036409 31.0 31.0 34.0 30.0 34.0 3 31.64117668424987 31.0 31.0 34.0 30.0 34.0 4 35.43936870361561 37.0 35.0 37.0 33.0 37.0 5 35.27016278328603 37.0 35.0 37.0 33.0 37.0 6 35.29799224573679 37.0 35.0 37.0 32.0 37.0 7 35.18373520444868 37.0 35.0 37.0 32.0 37.0 8 35.215776023883784 37.0 35.0 37.0 32.0 37.0 9 36.72163302345963 39.0 35.0 39.0 32.0 39.0 10 36.57842638136727 39.0 35.0 39.0 32.0 39.0 11 36.68482077786344 39.0 35.0 39.0 32.0 39.0 12 36.54795445864276 39.0 35.0 39.0 32.0 39.0 13 36.58260580972177 39.0 35.0 39.0 32.0 39.0 14 37.598135719524855 39.0 36.0 41.0 32.0 41.0 15 37.58863680568412 39.0 36.0 41.0 32.0 41.0 16 37.544262454509024 39.0 36.0 41.0 32.0 41.0 17 37.59928515019931 39.0 36.0 41.0 32.0 41.0 18 37.570480253460595 39.0 36.0 41.0 32.0 41.0 19 37.62919905420954 39.0 37.0 41.0 32.0 41.0 20 37.58809929159451 39.0 36.0 41.0 32.0 41.0 21 37.53671851016912 39.0 36.0 41.0 32.0 41.0 22 37.42539919575004 39.0 36.0 41.0 32.0 41.0 23 37.320196703793705 39.0 36.0 41.0 31.0 41.0 24 37.24736251942081 39.0 36.0 41.0 31.0 41.0 25 37.19384603487426 39.0 36.0 41.0 31.0 41.0 26 36.9684173124647 39.0 36.0 40.0 31.0 41.0 27 36.811891744955275 39.0 35.0 40.0 30.0 41.0 28 36.692514698886654 39.0 35.0 40.0 30.0 41.0 29 36.54651327645155 38.0 35.0 40.0 30.0 41.0 30 36.36711772935301 38.0 35.0 40.0 30.0 41.0 31 36.1387290179105 38.0 35.0 40.0 30.0 41.0 32 36.0080811655063 38.0 35.0 40.0 30.0 41.0 33 36.087415608823314 38.0 35.0 40.0 30.0 41.0 34 36.0667589570059 38.0 35.0 40.0 30.0 41.0 35 36.00010662404829 38.0 35.0 40.0 29.0 41.0 36 35.919559478643556 38.0 35.0 40.0 29.0 41.0 37 35.79318449709772 38.0 35.0 40.0 28.0 41.0 38 35.68263615656628 38.0 35.0 40.0 27.0 41.0 39 35.62778540680004 38.0 35.0 40.0 27.0 41.0 40 35.47887496397045 38.0 34.0 40.0 26.0 41.0 41 35.35063699081159 38.0 34.0 40.0 26.0 41.0 42 35.19139895438131 38.0 34.0 40.0 25.0 41.0 43 34.85682968038563 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 3.0 15 16.0 16 30.0 17 88.0 18 191.0 19 494.0 20 1074.0 21 2137.0 22 4049.0 23 6914.0 24 11366.0 25 18186.0 26 27428.0 27 40457.0 28 56482.0 29 75826.0 30 97966.0 31 119860.0 32 146821.0 33 179221.0 34 219851.0 35 269036.0 36 342807.0 37 466826.0 38 625432.0 39 701300.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.35636334663595 22.203960087455155 13.516297075689012 22.92337949021988 2 18.235436443865368 23.03433880201437 35.62942167584883 23.100803078271426 3 19.849501913374404 26.058419433228742 31.863425139372865 22.228653514023993 4 13.17047193444144 16.185149730627817 35.87565292583419 34.768725409096554 5 12.075437100013357 39.7867636203434 34.51408726299583 13.623712016647413 6 31.504975007791757 36.870654484185664 15.743070022707407 15.881300485315172 7 25.34983818921902 34.34486552481294 21.903830966904366 18.401465319063675 8 27.631417068752594 33.33852783825015 20.38903717312699 18.64101791987027 9 25.822821295751673 13.589000616310434 22.756003168257436 37.832174919680455 10 16.330176011698182 27.36553067140343 33.86201090611694 22.44228241078145 11 32.57021955180405 22.031135393794248 24.408148655013793 20.990496399387908 12 20.430749438173283 27.173607384476945 31.439037993311974 20.956605184037794 13 30.63566679867739 20.724785755964504 28.066056527149296 20.573490918208808 14 21.172138081657618 22.21878200186065 28.062922248806633 28.546157667675104 15 23.30511701696377 28.9554299761209 25.949217660691815 21.790235346223515 16 22.391606695521553 28.10199820496657 26.65703730435659 22.849357795155285 17 20.374859689782603 27.00722700142712 27.677171674091294 24.94074163469898 18 21.288457888187693 26.0561346321939 31.241226949872637 21.414180529745767 19 20.819839337478 25.064355229147967 32.14184865009268 21.97395678328135 20 24.095013743956994 24.25530132424725 31.040896766830784 20.608788164964977 21 23.78846960511608 25.050529253655096 30.14727593132005 21.01372520990877 22 22.51782730653594 24.662845385756434 31.03934427381993 21.7799830338877 23 21.660528949014957 25.843794597558663 31.800798157161502 20.694878296264875 24 20.590041079550915 25.488039359505827 30.60113115226617 23.32078840867709 25 21.66820353710634 26.123653432005494 31.22505758870301 20.98308544218516 26 22.577935149144782 25.655767189319782 30.191741674536537 21.5745559869989 27 21.575053956455207 26.60167481774318 29.98640250461061 21.836868721191003 28 21.352432317163192 26.154058861161428 30.20008998600999 22.293418835665392 29 20.454183294940865 26.176057394201997 31.050328894179735 22.319430416677406 30 20.152120881206752 26.552112210679745 32.148878807122955 21.146888100990548 31 21.302899002420716 26.03120686705739 31.27069502475787 21.395199105764025 32 22.100968286961635 25.98530580011389 29.804526483773223 22.10919942915125 33 22.53393808306365 25.969224315907134 29.648251951454423 21.848585649574794 34 21.585950699852134 27.977125040716327 29.556859910060858 20.880064349370684 35 20.52026677102544 28.6971595822212 29.971170497711686 20.81140314904167 36 21.109247468557623 26.22110898383767 31.198899546086196 21.47074400151851 37 21.412891667623548 26.147878181438976 30.60716537038382 21.832064780553647 38 21.327006582570366 25.84739755303668 31.16052660562928 21.665069258763676 39 22.17106481101766 25.5432846768354 30.947512847611975 21.33813766453497 40 20.769866637921137 26.06899396109511 30.57658418730213 22.58455521368162 41 21.31441088455779 25.687900865412335 30.595360565037154 22.402327684992724 42 19.722695455940833 26.97482969444594 30.892706915096795 22.40976793451643 43 20.03477584344309 26.606039373566144 30.563549104475165 22.795635678515605 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 223.0 1 372.5 2 522.0 3 1457.5 4 2393.0 5 2393.0 6 4137.5 7 5882.0 8 6281.5 9 6681.0 10 9891.5 11 13102.0 12 13102.0 13 23390.0 14 33678.0 15 54730.0 16 75782.0 17 73942.0 18 72102.0 19 72102.0 20 78504.5 21 84907.0 22 70904.0 23 56901.0 24 63437.0 25 69973.0 26 69973.0 27 75966.5 28 81960.0 29 87309.0 30 92658.0 31 99887.0 32 107116.0 33 107116.0 34 117413.5 35 127711.0 36 140573.5 37 153436.0 38 160044.0 39 166652.0 40 166652.0 41 175552.0 42 184452.0 43 202130.0 44 219808.0 45 261355.0 46 302902.0 47 302902.0 48 309291.0 49 315680.0 50 290413.0 51 265146.0 52 253163.0 53 241180.0 54 241180.0 55 214066.5 56 186953.0 57 162850.5 58 138748.0 59 125034.0 60 111320.0 61 111320.0 62 100024.0 63 88728.0 64 78113.0 65 67498.0 66 58073.0 67 48648.0 68 48648.0 69 41367.5 70 34087.0 71 29306.5 72 24526.0 73 19133.5 74 13741.0 75 13741.0 76 10477.5 77 7214.0 78 6007.5 79 4801.0 80 3898.5 81 2996.0 82 2996.0 83 2253.5 84 1511.0 85 1248.5 86 986.0 87 848.0 88 710.0 89 710.0 90 561.5 91 413.0 92 254.5 93 96.0 94 62.0 95 28.0 96 28.0 97 18.5 98 9.0 99 6.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3413864.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.97464700191364 #Duplication Level Percentage of deduplicated Percentage of total 1 73.34142478761063 30.05138991289745 2 13.723105482082254 11.245988057966926 3 5.188387920228854 6.377770906211105 4 2.4262570559396495 3.976601056121175 5 1.3300080236409066 2.724830463919948 6 0.8315118174193115 2.0442541918005577 7 0.5434370542092783 1.5586999024789492 8 0.37809840662531935 1.2393958994766774 9 0.28349469007467987 1.0454485367454225 >10 1.6622334517190374 12.85718021610103 >50 0.16076083536727304 4.600506548902265 >100 0.11469860896009931 9.182652563020671 >500 0.01000629852246735 2.8157355314480865 >1k 0.005503464187142124 4.200115893553889 >5k 7.147356087197563E-4 2.1362701343305774 >10k+ 3.5736780435987816E-4 3.9431601850253197 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 36762 1.0768443031122505 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 36439 1.0673828834423398 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 32066 0.939287563886552 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 16979 0.4973543175709401 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12397 0.36313690293462186 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 9539 0.2794194496324399 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 8878 0.26005722547822646 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 8702 0.2549017769893587 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 8489 0.24866251262499034 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 7333 0.21480058959583628 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 7118 0.20850274058954896 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 6264 0.1834870984901566 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 5979 0.175138787016706 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5515 0.1615471500915092 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5128 0.15021102188019206 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4611 0.13506689194414306 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4456 0.13052658219542432 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4454 0.13046799755350535 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3715 0.1088209723644527 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3569 0.10454429350436924 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 2.929232095947583E-5 0.0 3 0.0 0.0 0.0 5.858464191895166E-5 0.0 4 0.0 0.0 0.0 5.858464191895166E-5 0.0 5 2.929232095947583E-5 0.0 0.0 5.858464191895166E-5 0.0 6 2.929232095947583E-5 0.0 0.0 5.858464191895166E-5 0.0 7 2.929232095947583E-5 0.0 0.0 5.858464191895166E-5 0.0 8 2.929232095947583E-5 0.0 0.0 5.858464191895166E-5 0.0 9 2.929232095947583E-5 0.0 0.0 5.858464191895166E-5 0.0 10 2.929232095947583E-5 0.0 0.0 8.78769628784275E-5 0.0 11 2.929232095947583E-5 0.0 0.0 2.3433856767580665E-4 0.0 12 5.858464191895166E-5 0.0 0.0 4.100924934326616E-4 0.0 13 5.858464191895166E-5 0.0 0.0 4.3938481439213746E-4 0.0 14 8.78769628784275E-5 0.0 0.0 6.151387401489924E-4 0.0 15 8.78769628784275E-5 0.0 0.0 9.080619497437508E-4 0.0 16 8.78769628784275E-5 0.0 0.0 0.0012888621222169367 0.0 17 8.78769628784275E-5 0.0 0.0 0.0019625855042848805 0.0 18 8.78769628784275E-5 0.0 0.0 0.002401970318677018 0.0 19 8.78769628784275E-5 0.0 0.0 0.00281206281210968 0.0 20 8.78769628784275E-5 0.0 0.0 0.0033979092312991965 0.0 21 8.78769628784275E-5 0.0 0.0 0.004979694563110891 0.0 22 8.78769628784275E-5 0.0 0.0 0.008758403966883273 0.0 23 8.78769628784275E-5 0.0 0.0 0.01441182191206211 0.0 24 8.78769628784275E-5 0.0 0.0 0.023785364619094376 0.0 25 8.78769628784275E-5 0.0 0.0 0.02853072061452946 0.0 26 8.78769628784275E-5 0.0 0.0 0.03597097013823632 0.0 27 8.78769628784275E-5 0.0 0.0 0.09285665744153838 0.0 28 8.78769628784275E-5 0.0 0.0 0.15094332990417897 0.0 29 8.78769628784275E-5 0.0 0.0 0.22051259218293406 0.0 30 8.78769628784275E-5 0.0 0.0 0.3460887721362069 0.0 31 8.78769628784275E-5 0.0 0.0 0.5352292885715424 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8960 0.0 27.688057 1 GTATTGG 1015 0.0 18.773397 1 ATTGGAC 1010 0.0 17.950495 3 GGACCCT 1720 0.0 16.456396 6 TTGGACC 1815 0.0 16.410467 4 GTATCAA 15200 0.0 16.333553 2 CCCGTAT 145 5.3552867E-8 15.310345 1 GTATACT 355 0.0 15.112676 4 TGGACCC 1800 0.0 15.108334 5 TCTAACG 140 6.0043385E-7 14.535714 2 CGTCTGT 780 0.0 14.467948 34 CGTTTAG 275 0.0 14.127272 26 TATTGGA 1600 0.0 14.106251 2 TATACTG 460 0.0 14.076087 5 GACCCTC 1830 0.0 14.051913 7 GCGGTTA 95 0.0012459534 13.631579 30 AATGCGT 290 0.0 13.396551 35 ATTCGTC 180 5.1684765E-8 13.361111 17 CGAATTA 280 0.0 13.214285 15 TGCGTCT 850 0.0 12.841177 32 >>END_MODULE