##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088373_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2729950 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.420880968515906 31.0 31.0 34.0 30.0 34.0 2 31.6122137768091 31.0 31.0 34.0 30.0 34.0 3 31.690532427333835 31.0 31.0 34.0 30.0 34.0 4 35.48140149086979 37.0 35.0 37.0 33.0 37.0 5 35.32017362955366 37.0 35.0 37.0 33.0 37.0 6 35.351389952196925 37.0 35.0 37.0 32.0 37.0 7 35.23173501346179 37.0 35.0 37.0 32.0 37.0 8 35.26955621897837 37.0 35.0 37.0 32.0 37.0 9 36.768963167823586 39.0 37.0 39.0 32.0 39.0 10 36.65049543031924 39.0 35.0 39.0 32.0 39.0 11 36.74839429293577 39.0 35.0 39.0 32.0 39.0 12 36.62390300188648 39.0 35.0 39.0 32.0 39.0 13 36.661900401106244 39.0 35.0 39.0 32.0 39.0 14 37.668134214912364 39.0 37.0 41.0 32.0 41.0 15 37.65775270609352 39.0 36.0 41.0 32.0 41.0 16 37.6051297642814 39.0 36.0 41.0 32.0 41.0 17 37.69328522500412 39.0 37.0 41.0 32.0 41.0 18 37.67410575285262 39.0 37.0 41.0 32.0 41.0 19 37.7416513122951 40.0 37.0 41.0 32.0 41.0 20 37.70545101558637 39.0 37.0 41.0 32.0 41.0 21 37.65475338376161 39.0 37.0 41.0 32.0 41.0 22 37.549556585285444 39.0 36.0 41.0 32.0 41.0 23 37.456166230150735 39.0 36.0 41.0 32.0 41.0 24 37.39084268942655 39.0 36.0 41.0 32.0 41.0 25 37.332779354933244 39.0 36.0 41.0 31.0 41.0 26 37.10723273320024 39.0 36.0 41.0 31.0 41.0 27 36.94287697576879 39.0 35.0 40.0 31.0 41.0 28 36.82679756039488 39.0 35.0 40.0 31.0 41.0 29 36.68417443542922 39.0 35.0 40.0 30.0 41.0 30 36.49406033077529 38.0 35.0 40.0 30.0 41.0 31 36.24147731643437 38.0 35.0 40.0 30.0 41.0 32 36.106473012326234 38.0 35.0 40.0 30.0 41.0 33 36.141394897342444 38.0 35.0 40.0 30.0 41.0 34 36.10250334255206 38.0 35.0 40.0 30.0 41.0 35 35.99871169801645 38.0 35.0 40.0 30.0 41.0 36 35.907368266818075 38.0 35.0 40.0 29.0 41.0 37 35.77104379201084 38.0 35.0 40.0 28.0 41.0 38 35.64225205589846 38.0 35.0 40.0 27.0 41.0 39 35.55428451070532 38.0 35.0 40.0 27.0 41.0 40 35.38424952837964 38.0 34.0 40.0 26.0 41.0 41 35.23226652502793 38.0 34.0 40.0 25.0 41.0 42 35.053873880474 38.0 34.0 40.0 24.0 41.0 43 34.71476693712339 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 4.0 15 4.0 16 20.0 17 64.0 18 139.0 19 397.0 20 759.0 21 1606.0 22 3090.0 23 5306.0 24 8780.0 25 13829.0 26 21133.0 27 31046.0 28 44683.0 29 60073.0 30 76933.0 31 94755.0 32 116257.0 33 141759.0 34 174663.0 35 213287.0 36 270404.0 37 371201.0 38 483493.0 39 596262.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.48808586237843 22.429678199234417 13.736405428670857 22.345830509716293 2 17.84160882067437 23.060532244180294 36.44509972710123 22.652759208044102 3 19.810289565742963 26.291287386215867 32.1063389439367 21.792084104104468 4 12.77272477517903 15.929412626604883 35.61878422681734 35.679078371398745 5 11.63486510741955 40.285829410795074 34.39894503562336 13.680360446162018 6 31.213721863037787 36.379933698419386 15.860437004340739 16.545907434202093 7 24.758878367735672 35.01972563600066 21.71332808293192 18.508067913331747 8 27.634169123976633 33.365116577226686 20.383743292001686 18.616971006794998 9 25.607941537390793 13.779886078499606 23.479441015403214 37.13273136870639 10 16.59554204289456 27.445374457407645 33.49028370482976 22.468799794868037 11 31.704573343834134 22.085605963479185 24.88748878184582 21.32233191084086 12 20.49484422791626 27.49314090001648 31.6606164948076 20.35139837725966 13 30.934852286671916 21.055880144324988 28.40425648821407 19.605011080789026 14 21.072583746955072 22.492756277587503 28.526383267092804 27.90827670836462 15 23.149178556383816 28.90507152145644 26.796351581530796 21.14939834062895 16 21.82831187384384 28.21469257678712 27.21569992124398 22.74129562812506 17 19.64911445264565 27.056795912013044 27.945420245792047 25.34866938954926 18 20.720306232714886 26.26678144288357 32.07875602117255 20.934156303228995 19 20.084873349328742 24.81305518416088 33.41870730233155 21.68336416417883 20 24.17278704738182 23.893661056063298 32.06271177127786 19.87084012527702 21 23.648967929815566 24.808293192183008 31.03250975292588 20.51022912507555 22 22.170735727760583 24.42469642301141 31.950218868477442 21.454348980750563 23 21.129434605029395 26.090148171211926 32.84298247220645 19.937434751552228 24 19.845125368596495 25.544204106302317 31.452957013864726 23.15771351123647 25 21.06185094965109 26.307697943185772 32.31835747907471 20.312093628088427 26 22.362973680836646 25.420612099122696 31.139984248795766 21.076429971244895 27 20.874924449165736 26.79045403761974 30.816351947837873 21.518269565376656 28 20.73876810930603 26.249894686715873 30.95133610505687 22.060001098921227 29 19.816040586823934 26.25916225571897 31.891499844319494 22.033297313137602 30 19.357607282184656 26.600853495485268 33.407754720782435 20.633784501547648 31 20.684151724390556 26.007142987966812 32.446418432572024 20.862286855070604 32 21.61603692375318 26.090477847579624 30.640158244656497 21.653326984010697 33 22.337625231231343 26.070917049762816 30.256378321947285 21.335079397058553 34 20.960676935475007 28.425209252916723 30.278613161413215 20.33550065019506 35 19.754903935969523 29.31617795197714 30.544918405098993 20.383999706954338 36 20.47872671660653 26.12948955109068 32.37817542445832 21.013608307844468 37 20.617520467407825 26.411839044671147 31.51383724976648 21.456803238154546 38 20.821077309108222 25.936921921646917 32.060843605194236 21.181157164050624 39 21.70428029817396 25.381087565706334 32.12033187421015 20.79430026190956 40 20.06644810344512 26.170259528562795 31.34053737247935 22.42275499551274 41 20.830051832451144 25.736112383010678 31.350024725727575 22.0838110588106 42 18.638546493525524 27.301818714628475 31.803989084049157 22.255645707796845 43 19.233832121467426 27.027051777505086 31.289181120533343 22.44993498049415 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 269.0 1 350.5 2 432.0 3 1386.0 4 2340.0 5 2340.0 6 3912.5 7 5485.0 8 5841.5 9 6198.0 10 9185.0 11 12172.0 12 12172.0 13 21615.0 14 31058.0 15 51215.0 16 71372.0 17 69736.5 18 68101.0 19 68101.0 20 71809.5 21 75518.0 22 60697.0 23 45876.0 24 50872.0 25 55868.0 26 55868.0 27 61194.5 28 66521.0 29 70196.0 30 73871.0 31 78967.0 32 84063.0 33 84063.0 34 91443.5 35 98824.0 36 107900.5 37 116977.0 38 122703.5 39 128430.0 40 128430.0 41 135402.5 42 142375.0 43 160302.0 44 178229.0 45 220120.0 46 262011.0 47 262011.0 48 265021.0 49 268031.0 50 244893.5 51 221756.0 52 209196.0 53 196636.0 54 196636.0 55 171343.0 56 146050.0 57 123184.0 58 100318.0 59 88902.0 60 77486.0 61 77486.0 62 68322.5 63 59159.0 64 51791.0 65 44423.0 66 37822.0 67 31221.0 68 31221.0 69 26571.0 70 21921.0 71 18583.0 72 15245.0 73 12325.0 74 9405.0 75 9405.0 76 7397.5 77 5390.0 78 4234.5 79 3079.0 80 2411.0 81 1743.0 82 1743.0 83 1318.0 84 893.0 85 713.0 86 533.0 87 440.0 88 347.0 89 347.0 90 292.0 91 237.0 92 148.0 93 59.0 94 39.0 95 19.0 96 19.0 97 12.0 98 5.0 99 4.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2729950.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.94731874092385 #Duplication Level Percentage of deduplicated Percentage of total 1 74.3321019454833 31.180323729900334 2 13.504998513254549 11.329969544623824 3 4.947422001136155 6.225932628825528 4 2.3488835702553006 3.941174712272731 5 1.234114362149776 2.588389425592429 6 0.7363536310363431 1.8532836280270872 7 0.49912664803718015 1.4655917218113153 8 0.351252074560277 1.178726618399255 9 0.2610990602608034 0.9857164953344041 >10 1.5053451587214555 12.113388887547211 >50 0.15999257216286522 4.687411455691648 >100 0.10557666426082547 8.355112837069358 >500 0.006385779004620977 1.8527174962587207 >1k 0.006035873305737223 4.8595351428871485 >5k 8.747642472082933E-4 2.632979024856663 >10k+ 4.3738212360414666E-4 4.749746650902323 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 35555 1.302404805948827 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 34620 1.2681550944156488 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 31422 1.1510100917599222 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 16532 0.6055788567556182 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11313 0.41440319419769595 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 9687 0.35484166376673565 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 8634 0.3162695287459477 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 8524 0.31224015091851504 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 8508 0.3116540595981611 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 7050 0.2582464880309163 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 6888 0.25231231341233357 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 6065 0.22216524112163225 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 5737 0.21015036905437828 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5537 0.2028242275499551 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5125 0.18773237605084342 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4568 0.16732907196102492 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4393 0.16091869814465468 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4286 0.15699921243978826 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3855 0.14121137749775636 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3469 0.1270719243942197 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3242 0.11875675378669938 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3186 0.11670543416546089 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3146 0.11524020586457628 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3033 0.1111009359145772 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2944 0.10784080294510888 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 3.663070752211579E-5 0.0 6 3.663070752211579E-5 0.0 0.0 3.663070752211579E-5 0.0 7 3.663070752211579E-5 0.0 0.0 3.663070752211579E-5 0.0 8 7.326141504423158E-5 0.0 0.0 3.663070752211579E-5 0.0 9 7.326141504423158E-5 0.0 0.0 3.663070752211579E-5 0.0 10 7.326141504423158E-5 0.0 0.0 7.326141504423158E-5 0.0 11 7.326141504423158E-5 0.0 0.0 2.564149526548105E-4 0.0 12 7.326141504423158E-5 0.0 0.0 6.593527353980842E-4 0.0 13 7.326141504423158E-5 0.0 0.0 7.692448579644316E-4 0.0 14 7.326141504423158E-5 0.0 0.0 9.890291030971263E-4 0.0 15 7.326141504423158E-5 0.0 0.0 0.0015384897159288632 0.0 16 7.326141504423158E-5 0.0 0.0 0.0023809959889375264 0.0 17 7.326141504423158E-5 0.0 0.0 0.0035531786296452315 0.0 18 7.326141504423158E-5 0.0 0.0 0.003882854997344274 0.0 19 7.326141504423158E-5 0.0 0.0 0.004725361270352937 0.0 20 7.326141504423158E-5 0.0 0.0 0.005787651788494295 0.0 21 7.326141504423158E-5 0.0 0.0 0.008168647777431821 0.0 22 7.326141504423158E-5 0.0 0.0 0.014579021593802085 0.0 23 7.326141504423158E-5 0.0 0.0 0.023700067766808917 0.0 24 7.326141504423158E-5 0.0 0.0 0.036264400446894635 0.0 25 7.326141504423158E-5 0.0 0.0 0.041356068792468725 0.0 26 7.326141504423158E-5 0.0 0.0 0.05066026850308614 0.0 27 7.326141504423158E-5 0.0 0.0 0.12234656312386674 0.0 28 7.326141504423158E-5 0.0 0.0 0.19894137255261085 0.0 29 7.326141504423158E-5 0.0 0.0 0.28879649810436087 0.0 30 7.326141504423158E-5 0.0 0.0 0.4693492554808696 0.0 31 7.326141504423158E-5 0.0 0.0 0.7288045568600158 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8300 0.0 27.683132 1 ATTGGAC 1090 0.0 19.688074 3 GTATTGG 1085 0.0 19.608295 1 ATAACGC 205 0.0 17.146341 3 ACGTTTA 165 5.4569682E-11 16.818182 26 TTGGACC 1735 0.0 16.31412 4 GTATCAA 14195 0.0 16.225784 2 CGTCTGT 675 0.0 16.17037 34 GGACCCT 1640 0.0 15.905487 6 TAAGACG 70 0.002593719 15.857142 4 TATTGGA 1370 0.0 15.664233 2 CGCCGTT 155 7.221388E-9 15.516129 25 TGGACCC 1760 0.0 15.451704 5 CGGAATA 85 5.367507E-4 15.235294 27 CGCGTAT 110 1.4532443E-5 15.136364 24 TATACCG 215 1.2732926E-11 14.627907 5 CAATGCG 140 6.003065E-7 14.535714 19 TAGTGCG 90 8.2791556E-4 14.388888 7 ACCGTTA 155 1.2119744E-7 14.32258 8 GTGATCG 105 1.6569474E-4 14.095238 8 >>END_MODULE