##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088369_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1127801 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.098105073501443 31.0 31.0 33.0 30.0 34.0 2 31.27844451281742 31.0 31.0 34.0 28.0 34.0 3 31.317523215531818 31.0 31.0 34.0 28.0 34.0 4 35.16281152437354 35.0 35.0 37.0 32.0 37.0 5 35.010378604026776 35.0 35.0 37.0 32.0 37.0 6 35.08293839072673 37.0 35.0 37.0 32.0 37.0 7 34.9369392295272 36.0 35.0 37.0 32.0 37.0 8 35.01500176006228 37.0 35.0 37.0 32.0 37.0 9 36.403376127526045 38.0 35.0 39.0 32.0 39.0 10 36.276628589618205 38.0 35.0 39.0 32.0 39.0 11 36.418021441725976 38.0 35.0 39.0 32.0 39.0 12 36.255076915165 38.0 35.0 39.0 32.0 39.0 13 36.30402881359389 38.0 35.0 39.0 32.0 39.0 14 37.16862194660228 39.0 36.0 41.0 31.0 41.0 15 37.161297072799194 39.0 36.0 41.0 31.0 41.0 16 37.07694531216057 39.0 36.0 40.0 31.0 41.0 17 37.23109307404409 39.0 36.0 40.0 32.0 41.0 18 37.23097869216289 39.0 36.0 40.0 31.0 41.0 19 37.325045819253575 39.0 36.0 41.0 31.0 41.0 20 37.30056898335788 39.0 36.0 40.0 31.0 41.0 21 37.24937644141121 39.0 36.0 41.0 31.0 41.0 22 37.13376561999856 39.0 36.0 40.0 31.0 41.0 23 37.00781432185288 39.0 36.0 40.0 31.0 41.0 24 36.93771418893936 39.0 35.0 40.0 31.0 41.0 25 36.86112000255364 39.0 35.0 40.0 31.0 41.0 26 36.59664869954894 38.0 35.0 40.0 30.0 41.0 27 36.40429650266315 38.0 35.0 40.0 30.0 41.0 28 36.25294799348467 38.0 35.0 40.0 30.0 41.0 29 36.07751899492907 38.0 35.0 40.0 30.0 41.0 30 35.84848213470284 38.0 34.0 40.0 29.0 41.0 31 35.53698480494342 38.0 34.0 40.0 28.0 41.0 32 35.392651717811916 37.0 34.0 40.0 27.0 41.0 33 35.381716277960386 38.0 34.0 40.0 27.0 41.0 34 35.286228687507815 38.0 34.0 40.0 27.0 41.0 35 35.15078457990372 38.0 34.0 40.0 26.0 41.0 36 35.028251437975314 38.0 34.0 40.0 25.0 41.0 37 34.85981037434796 38.0 33.0 40.0 25.0 41.0 38 34.70465002247737 38.0 33.0 40.0 24.0 41.0 39 34.55586756883528 38.0 33.0 40.0 24.0 41.0 40 34.31042799217238 38.0 33.0 40.0 23.0 41.0 41 34.11527831594404 38.0 33.0 40.0 21.0 41.0 42 33.84496555686686 37.0 33.0 40.0 20.0 41.0 43 33.47544114608871 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 4.0 15 4.0 16 15.0 17 51.0 18 100.0 19 258.0 20 473.0 21 1047.0 22 1851.0 23 3162.0 24 5149.0 25 8137.0 26 11968.0 27 16925.0 28 23677.0 29 30960.0 30 38929.0 31 46728.0 32 55213.0 33 67158.0 34 80130.0 35 95743.0 36 121553.0 37 163338.0 38 196611.0 39 158616.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.951107509214836 23.69451702915674 14.729105578023075 20.625269883605352 2 18.689290043190244 23.894906991570323 35.302593276650754 22.11320968858868 3 21.069231185288896 26.149471404973042 32.84728422833461 19.934013181403458 4 13.19958042243268 16.30021608422053 34.09723878592057 36.40296470742622 5 10.91167679404434 41.56646429644946 33.71853722420888 13.803321685297318 6 31.22767225778307 35.824405192050726 14.839408725475506 18.108513824690704 7 23.747629236008834 36.61133480108636 20.712253314192843 18.928782648711962 8 28.7503735144764 32.81110763335021 19.87726558142793 18.56125327074546 9 25.299321422839665 13.267766210528276 24.33124283450715 37.1016695321249 10 16.98304931455106 28.035885763534523 32.585092582822675 22.39597233909174 11 31.050690680359388 21.398278597021992 25.348443564068486 22.202587158550134 12 20.47214003179639 28.22847293095147 31.4861398420466 19.813247195205538 13 32.072590820543695 20.39056535683157 29.653724371586833 17.883119451037903 14 20.955381312837993 22.61161321899874 29.33655848859861 27.09644697956466 15 23.37992252179241 28.602120409540337 27.83824451299476 20.1797125556725 16 21.387283749526734 27.951917049195735 28.075077074767623 22.585722126509907 17 18.900320180599238 26.840994111549822 28.388252892132567 25.870432815718374 18 20.11445281570064 25.161265152274204 34.164626560891506 20.55965547113365 19 19.290814602930837 23.669157945417677 35.78831726519129 21.251710186460198 20 24.59343448001908 22.149740956072925 34.428857573277554 18.82796699063044 21 24.16862549332728 23.311736733696815 32.92345014767676 19.596187625299144 22 21.774320114984825 22.931882486360625 34.07817513905378 21.215622259600764 23 20.59104398737011 25.447840532150618 35.28477098353344 18.676344496945827 24 18.855099436868738 24.241688028295773 33.45545889744733 23.447753637388153 25 20.289395026250197 25.43826437465475 34.76641712500698 19.50592347408807 26 22.102392177343344 24.144507763337682 33.12756417133873 20.625535887980238 27 20.617378420483757 25.949702119434193 32.53002967722142 20.90288978286063 28 20.139457226939857 25.449525226524894 32.750990644626135 21.660026901909113 29 19.03030765179318 25.324680506578733 33.83451513165887 21.810496709969225 30 18.267318436497217 25.72368706890666 36.14192574753879 19.867068747057324 31 19.91104813703836 24.884709270518467 34.60016439070368 20.604078201739494 32 21.34277235079593 25.3391334109475 32.160815604880646 21.157278633375924 33 22.595741624630588 25.170309301020303 31.434889665818705 20.799059408530404 34 20.48481957366592 28.718541657615127 31.55911370889013 19.237525059828815 35 18.705427641933284 29.788677257778634 31.916268916236106 19.589626184051973 36 19.834350208946436 25.45608666777206 34.495181330748956 20.21438179253255 37 19.99661287762646 26.03367083377298 33.211089545052715 20.758626743547843 38 20.457243786802813 25.38639352155212 33.63722855361895 20.519134138026125 39 21.91406107992456 24.927535974875 33.15469661757704 20.0037063276234 40 19.71420489962325 26.04040961127007 32.009547783695886 22.235837705410795 41 20.75259731105044 25.625442786449028 31.98436603620674 21.637593866293788 42 18.04378609346862 27.596712540598915 32.416800481645254 21.942700884287213 43 18.724225284425177 27.31155585072189 31.955814899969052 22.008403964883875 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 56.0 1 104.0 2 152.0 3 460.5 4 769.0 5 769.0 6 1548.0 7 2327.0 8 2657.0 9 2987.0 10 4580.0 11 6173.0 12 6173.0 13 11408.5 14 16644.0 15 28358.0 16 40072.0 17 37790.0 18 35508.0 19 35508.0 20 37855.5 21 40203.0 22 30131.5 23 20060.0 24 21163.5 25 22267.0 26 22267.0 27 23323.0 28 24379.0 29 24736.0 30 25093.0 31 26362.0 32 27631.0 33 27631.0 34 30286.0 35 32941.0 36 36756.5 37 40572.0 38 42873.5 39 45175.0 40 45175.0 41 48233.5 42 51292.0 43 61571.5 44 71851.0 45 96633.5 46 121416.0 47 121416.0 48 123588.0 49 125760.0 50 112832.0 51 99904.0 52 93130.5 53 86357.0 54 86357.0 55 72954.5 56 59552.0 57 47881.0 58 36210.0 59 31286.0 60 26362.0 61 26362.0 62 23617.5 63 20873.0 64 18145.0 65 15417.0 66 13293.5 67 11170.0 68 11170.0 69 9277.0 70 7384.0 71 6207.0 72 5030.0 73 3960.0 74 2890.0 75 2890.0 76 2173.0 77 1456.0 78 1103.0 79 750.0 80 597.0 81 444.0 82 444.0 83 345.5 84 247.0 85 216.0 86 185.0 87 151.5 88 118.0 89 118.0 90 101.5 91 85.0 92 53.5 93 22.0 94 17.0 95 12.0 96 12.0 97 8.5 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1127801.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.11682439068063 #Duplication Level Percentage of deduplicated Percentage of total 1 79.90635241014321 35.25214516978127 2 11.105041163393688 9.798383017134379 3 3.4361592315527085 4.547773001904808 4 1.531046029262173 2.701795552280326 5 0.8363602855735834 1.844877992299464 6 0.5626427581788188 1.4893207054357882 7 0.3934338130304059 1.2149935307172806 8 0.28533397763415713 1.0070423187184403 9 0.2320777383707084 0.9214679545818178 >10 1.4746105902779134 12.558787327203156 >50 0.1363206018345834 4.113785611783148 >100 0.0822716063213829 6.851598909795786 >500 0.008872428074434413 2.9028489489948788 >1k 0.007864197611430502 6.662470238027442 >5k 0.0010082304630039105 2.948307433654754 >10k+ 6.049382778023464E-4 5.184402287687277 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 21258 1.884907000437134 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 20135 1.7853326961050753 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 16885 1.4971612899793492 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 9473 0.8399531477627701 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6566 0.5821949084989284 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 5975 0.5297920466465272 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 5608 0.49725084478556053 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 5520 0.48944804978892553 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4862 0.4311044235640862 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 4633 0.4107994229478428 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 4135 0.3666426967168853 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3740 0.3316187873569894 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 3466 0.30732372111746664 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3108 0.2755805323811559 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2786 0.24702939614346858 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2735 0.24250732177041873 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2681 0.23771924302248357 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2489 0.2206949630298253 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2168 0.19223249491709973 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2165 0.19196649054221446 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 2130 0.18886310616855279 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1909 0.16926745055200343 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1900 0.16846943742734755 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1737 0.15401653305858037 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1737 0.15401653305858037 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1712 0.1517998299345363 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1544 0.13690358494096033 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 1362 0.12076598619791966 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 1349 0.11961330057341678 No Hit CGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAG 1302 0.11544589870021396 No Hit ATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAG 1286 0.11402720870082578 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 1281 0.11358386807601695 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 1262 0.11189917370174349 No Hit CTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTAC 1167 0.10347570183037609 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1163 0.10312102933052905 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 1152 0.10214567995594967 No Hit GATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGA 1132 0.10037231745671443 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 1131 0.10028364933175268 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 8.866812496176187E-5 0.0 11 0.0 0.0 0.0 2.660043748852856E-4 0.0 12 0.0 0.0 0.0 0.0011526856245029043 0.0 13 0.0 0.0 0.0 0.0015960262493117136 0.0 14 0.0 0.0 0.0 0.0017733624992352375 0.0 15 0.0 0.0 0.0 0.0023940393739675706 0.0 16 0.0 0.0 0.0 0.00425606999816457 0.0 17 0.0 0.0 0.0 0.006384104997246854 0.0 18 0.0 0.0 0.0 0.007182118121902711 0.0 19 0.0 0.0 0.0 0.00851213999632914 0.0 20 0.0 0.0 0.0 0.009842161870755567 0.0 21 0.0 0.0 0.0 0.01569425811823185 0.0 22 0.0 0.0 0.0 0.02331971686494337 0.0 23 0.0 0.0 0.0 0.03972331998286932 0.0 24 0.0 0.0 0.0 0.06304303684781269 0.0 25 0.0 0.0 0.0 0.07137784059421831 0.0 26 0.0 0.0 0.0 0.0802446530903945 0.0 27 0.0 0.0 0.0 0.14488371618751889 0.0 28 0.0 0.0 0.0 0.21236015928341967 0.0 29 0.0 0.0 0.0 0.2937574979983171 0.0 30 0.0 0.0 0.0 0.4483947079316298 0.0 31 0.0 0.0 0.0 0.6610208715899347 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4885 0.0 30.296827 1 CGATTGC 35 8.869293E-4 26.42857 31 ATTGGAC 435 0.0 22.540228 3 GTATTGG 440 0.0 22.28409 1 GTTCGCT 70 5.1017832E-6 21.142857 37 TAGTGCG 45 0.003825764 20.555557 7 AGTGCGC 65 6.9019836E-5 19.923077 8 GCCGTCA 65 6.9019836E-5 19.923077 13 TGGACCC 720 0.0 19.527779 5 GGACCCT 730 0.0 19.260273 6 TATTGGA 520 0.0 19.211538 2 TTGGACC 800 0.0 18.73125 4 GTATCAA 7930 0.0 18.616646 2 CTCTTAC 50 0.007034803 18.5 1 CTACGAT 50 0.007034803 18.5 1 TATAACG 50 0.007034803 18.5 2 GTGTAGA 115 6.40448E-8 17.695652 1 ACGATCT 95 3.6062647E-6 17.526316 32 TGTTCGC 95 3.6062647E-6 17.526316 36 CGTCTGT 310 0.0 17.306452 34 >>END_MODULE