##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088368_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 611114 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.404842631653015 31.0 31.0 34.0 30.0 34.0 2 31.608032216574976 31.0 31.0 34.0 30.0 34.0 3 31.694713261355492 31.0 31.0 34.0 30.0 34.0 4 35.479344279463405 37.0 35.0 37.0 33.0 37.0 5 35.30825508824867 37.0 35.0 37.0 33.0 37.0 6 35.343469467235245 37.0 35.0 37.0 32.0 37.0 7 35.20958119107073 37.0 35.0 37.0 32.0 37.0 8 35.2510431768868 37.0 35.0 37.0 32.0 37.0 9 36.73594615734544 39.0 35.0 39.0 32.0 39.0 10 36.61852616696721 39.0 35.0 39.0 32.0 39.0 11 36.72991291313895 39.0 35.0 39.0 32.0 39.0 12 36.593876101676614 39.0 35.0 39.0 32.0 39.0 13 36.61818089587213 39.0 35.0 39.0 32.0 39.0 14 37.61405891535785 39.0 36.0 41.0 32.0 41.0 15 37.6128152848732 39.0 36.0 41.0 32.0 41.0 16 37.57423001273085 39.0 36.0 41.0 32.0 41.0 17 37.65660744149209 39.0 36.0 41.0 32.0 41.0 18 37.635259542409436 39.0 36.0 41.0 32.0 41.0 19 37.70859937753021 40.0 37.0 41.0 32.0 41.0 20 37.6774693428722 39.0 37.0 41.0 32.0 41.0 21 37.62566067869497 39.0 37.0 41.0 32.0 41.0 22 37.520258086052685 39.0 36.0 41.0 32.0 41.0 23 37.40236355246321 39.0 36.0 41.0 32.0 41.0 24 37.3411032966026 39.0 36.0 41.0 31.0 41.0 25 37.27434979398279 39.0 36.0 41.0 31.0 41.0 26 37.04062744430663 39.0 36.0 41.0 31.0 41.0 27 36.884533818567405 39.0 35.0 40.0 31.0 41.0 28 36.76863073010927 39.0 35.0 40.0 30.0 41.0 29 36.610566931865414 39.0 35.0 40.0 30.0 41.0 30 36.42420726738383 38.0 35.0 40.0 30.0 41.0 31 36.1822147749847 38.0 35.0 40.0 30.0 41.0 32 36.015108474032665 38.0 35.0 40.0 30.0 41.0 33 36.049313221428406 38.0 35.0 40.0 30.0 41.0 34 35.99831946248981 38.0 35.0 40.0 30.0 41.0 35 35.922255094794096 38.0 35.0 40.0 29.0 41.0 36 35.83111825289553 38.0 35.0 40.0 29.0 41.0 37 35.68533366933175 38.0 35.0 40.0 27.0 41.0 38 35.55912481140998 38.0 34.0 40.0 27.0 41.0 39 35.48243535576014 38.0 34.0 40.0 26.0 41.0 40 35.30520164813766 38.0 34.0 40.0 25.0 41.0 41 35.152950186053666 38.0 34.0 40.0 25.0 41.0 42 34.97036395827947 38.0 34.0 40.0 24.0 41.0 43 34.61391327968268 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 0.0 14 3.0 15 3.0 16 10.0 17 15.0 18 40.0 19 78.0 20 194.0 21 404.0 22 719.0 23 1216.0 24 2033.0 25 3115.0 26 4910.0 27 7159.0 28 10024.0 29 13896.0 30 17498.0 31 21418.0 32 26455.0 33 32401.0 34 39398.0 35 48313.0 36 60905.0 37 83840.0 38 108150.0 39 128916.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.279859404301 22.408748613188372 13.838334582418337 22.47305740009229 2 17.612753103348965 23.15607235311251 36.528863681735324 22.7023108618032 3 19.79057917180755 26.262203124130686 32.06210297914956 21.88511472491221 4 13.001665810307077 15.947924609810935 35.68663129956113 35.36377828032086 5 11.691435640486063 40.280700491234036 34.2929469787961 13.734916889483795 6 31.145580039076183 36.56453624037413 15.96363362645922 16.326250094090465 7 24.673301544392697 34.9177076617456 22.004732341265296 18.404258452596405 8 27.45527021144991 33.70058614268369 20.513848479989 18.3302951658774 9 25.660024152613097 13.89298886950716 23.46419816924502 36.98278880863472 10 16.398413389318524 27.826068458585468 33.69813160883239 22.077386543263614 11 31.580032530755307 22.534257110784566 24.708974103031515 21.17673625542861 12 20.318303949835872 27.749323366834993 31.74317721407135 20.189195469257783 13 30.447837882948193 21.472916673484814 28.160375969131785 19.918869474435212 14 20.86975588842671 22.795092241382132 28.629682841499292 27.705469028691866 15 23.04823649924564 29.282261574763464 26.60207424473993 21.06742768125096 16 21.767133464459988 28.434138311346164 27.3048891041606 22.49383912003325 17 19.69419780924672 27.48096099909346 28.236957425292168 24.58788376636765 18 20.488157692345453 26.78060067352409 31.91090369390981 20.820337940220647 19 20.090032301665484 25.639406068262222 33.127697941791546 21.142863688280748 20 23.701142503689983 24.67771970532503 32.00908504796159 19.612052743023398 21 23.10321805751464 25.642351508883777 30.863145010587225 20.391285423014363 22 21.927005435974305 25.2872622783965 31.619141436785934 21.16659084884326 23 20.824919736743063 26.690928370156797 32.33570168577385 20.14845020732629 24 19.758997502920895 26.412747867010083 31.313470154504724 22.514784475564298 25 20.872537693458177 26.953399856655224 31.954758032052936 20.219304417833662 26 22.002277807414 26.12654921994914 30.951835500414 20.91933747222286 27 20.868283168115934 27.416324941009368 30.520655720536595 21.194736170338103 28 20.512866666448488 26.910854603232785 30.720782047212143 21.85549668310659 29 19.705161393782504 26.976472474857395 31.758231688359288 21.560134443000813 30 19.30883599459348 27.360361569199853 32.92789888629618 20.40290354991049 31 20.386703626491947 26.706473751214993 32.222138586253955 20.6846840360391 32 21.3847170904283 26.84294583334697 30.569746397562486 21.202590678662247 33 21.884787453732038 26.767673461907272 30.2590024119886 21.088536672372094 34 20.586339046397235 28.6511191038006 30.46583779785768 20.29670405194448 35 19.648052572842385 29.4072791655894 30.482201356866312 20.462466904701905 36 20.230595273549614 26.632674100086074 32.063248428280154 21.073482198084154 37 20.334503873254416 26.810218715329707 31.41099696619616 21.444280445219714 38 20.480630455201485 26.460856730495458 32.01890318336677 21.03960963093629 39 21.187045297604048 26.020349721983134 31.953448947332248 20.83915603308057 40 19.763906570623487 26.427802341298023 31.56366897174668 22.244622116331815 41 20.502721259863137 26.126058313178884 31.378433483768987 21.992786943188996 42 18.65985724431121 27.34252528988045 31.767886188174383 22.22973127763396 43 18.895819765215656 27.073508379778566 31.48299662583413 22.54767522917164 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 85.0 1 101.0 2 117.0 3 334.5 4 552.0 5 552.0 6 944.5 7 1337.0 8 1437.0 9 1537.0 10 2300.5 11 3064.0 12 3064.0 13 5297.0 14 7530.0 15 11977.0 16 16424.0 17 15846.0 18 15268.0 19 15268.0 20 16096.5 21 16925.0 22 13920.5 23 10916.0 24 12256.0 25 13596.0 26 13596.0 27 14824.0 28 16052.0 29 16886.5 30 17721.0 31 18958.0 32 20195.0 33 20195.0 34 21667.5 35 23140.0 36 25107.0 37 27074.0 38 28422.5 39 29771.0 40 29771.0 41 31152.0 42 32533.0 43 36133.0 44 39733.0 45 47998.0 46 56263.0 47 56263.0 48 56693.5 49 57124.0 50 51990.5 51 46857.0 52 43892.5 53 40928.0 54 40928.0 55 36307.5 56 31687.0 57 27158.0 58 22629.0 59 20257.0 60 17885.0 61 17885.0 62 15787.0 63 13689.0 64 11993.0 65 10297.0 66 8706.5 67 7116.0 68 7116.0 69 6035.5 70 4955.0 71 4193.0 72 3431.0 73 2763.0 74 2095.0 75 2095.0 76 1613.5 77 1132.0 78 887.0 79 642.0 80 496.0 81 350.0 82 350.0 83 269.5 84 189.0 85 153.0 86 117.0 87 100.0 88 83.0 89 83.0 90 70.0 91 57.0 92 35.0 93 13.0 94 8.5 95 4.0 96 4.0 97 2.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 611114.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.36291663382819 #Duplication Level Percentage of deduplicated Percentage of total 1 84.36947371672011 50.084180346856144 2 9.324389276702671 11.070458865885243 3 2.577765463849255 4.590710289961343 4 1.0987187223720623 2.6089259168079577 5 0.615598779517778 1.8271869514200116 6 0.38556639911685286 1.3733007604547436 7 0.26888700871462495 1.1173341957572 8 0.19333218646791758 0.9181409974344573 9 0.14303878743372717 0.7642079652448994 >10 0.9089716684547151 10.077157526377805 >50 0.07010031914063664 2.932447560932456 >100 0.036706064442395846 4.737559172889918 >500 0.0038637962570938276 1.6650348886149111 >1k 0.002759854469352734 2.740107105390573 >5k 8.279563408058202E-4 3.493247455972364 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7533 1.2326669001201085 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7302 1.194867078810173 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6487 1.0615040728898373 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2913 0.476670473921396 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2585 0.4229980003730892 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1643 0.2688532745117932 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 1623 0.2655805627100672 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 1586 0.259526045876874 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1506 0.24643519866996993 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 1364 0.2231989448777151 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 1308 0.21403535183288225 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 1137 0.18605366592812472 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 1060 0.1734537254914795 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 994 0.16265377654578358 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 985 0.1611810562350069 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 935 0.15299927673069183 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 930 0.15218109878026032 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 930 0.15218109878026032 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 681 0.11143583684877126 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 681 0.11143583684877126 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 672 0.10996311653799454 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 1.636355900863014E-4 0.0 11 0.0 0.0 0.0 6.545423603452056E-4 0.0 12 0.0 0.0 0.0 9.818135405178085E-4 0.0 13 0.0 0.0 0.0 0.0017999914909493154 0.0 14 0.0 0.0 0.0 0.0022908982612082195 0.0 15 0.0 0.0 0.0 0.0037636185719849323 0.0 16 0.0 0.0 0.0 0.004909067702589042 0.0 17 0.0 0.0 0.0 0.007036330373710961 0.0 18 0.0 0.0 0.0 0.007854508324142468 0.0 19 0.0 0.0 0.0 0.008345415094401372 0.0 20 0.0 0.0 0.0 0.009818135405178084 0.0 21 0.0 0.0 0.0 0.014236296337508223 0.0 22 0.0 0.0 0.0 0.021599897891391787 0.0 23 0.0 0.0 0.0 0.031745304476742474 0.0 24 0.0 0.0 0.0 0.05039976174658083 0.0 25 0.0 0.0 0.0 0.0572724565302055 0.0 26 0.0 0.0 0.0 0.068399676656074 0.0 27 0.0 0.0 0.0 0.1279630314474877 0.0 28 0.0 0.0 0.0 0.2110899112113288 0.0 29 1.636355900863014E-4 0.0 0.0 0.30550764669112473 0.0 30 1.636355900863014E-4 0.0 0.0 0.5013794480244275 0.0 31 1.636355900863014E-4 0.0 0.0 0.801323484652618 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCACTA 25 1.2329494E-4 36.999996 29 ACGACGC 30 3.597523E-4 30.833334 28 GAACCGT 25 0.005494355 29.599998 6 GTCGAAT 40 5.9356476E-5 27.75 8 TCGAATC 45 1.3222215E-4 24.666668 9 GGTATCA 2070 0.0 24.487923 1 CGTGTCT 55 1.900769E-5 23.545454 35 TATCTCG 40 0.0019301581 23.125 36 TATGGCG 65 2.6794332E-6 22.76923 24 CGAATCG 50 2.7000968E-4 22.199999 10 TATACTG 85 5.1706593E-8 21.764706 5 CCCGTTG 45 0.0038237881 20.555557 31 TCTGTCG 45 0.0038237881 20.555557 8 ACCCGTT 45 0.0038237881 20.555557 30 CCGTTGA 45 0.0038237881 20.555557 32 AACCCGT 55 5.139307E-4 20.181818 29 GCACTAC 55 5.139307E-4 20.181818 30 GTCCTAC 65 6.895373E-5 19.923077 1 CTACCCT 75 9.254134E-6 19.733332 4 AGTCGAA 60 9.230068E-4 18.5 7 >>END_MODULE