##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088367_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 883689 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.753030760821964 31.0 31.0 31.0 28.0 34.0 2 30.9837193854399 31.0 31.0 34.0 28.0 34.0 3 31.012744302577037 31.0 31.0 34.0 27.0 34.0 4 34.85094303538915 35.0 35.0 37.0 32.0 37.0 5 34.586619274427996 35.0 35.0 37.0 30.0 37.0 6 34.71895429274326 35.0 35.0 37.0 31.0 37.0 7 34.61844042417638 35.0 35.0 37.0 30.0 37.0 8 34.66976277853408 35.0 35.0 37.0 30.0 37.0 9 36.13454394023237 38.0 35.0 39.0 32.0 39.0 10 35.84340531567101 37.0 35.0 39.0 30.0 39.0 11 36.05689331880333 37.0 35.0 39.0 31.0 39.0 12 35.84294814125784 37.0 35.0 39.0 30.0 39.0 13 35.94672220656815 37.0 35.0 39.0 30.0 39.0 14 36.8416411203489 38.0 36.0 40.0 31.0 41.0 15 36.864075483569444 38.0 36.0 40.0 31.0 41.0 16 36.78200362344671 38.0 36.0 40.0 31.0 41.0 17 36.78133936260381 38.0 36.0 40.0 31.0 41.0 18 36.73470078274144 38.0 36.0 40.0 31.0 41.0 19 36.77869929352974 39.0 36.0 40.0 30.0 41.0 20 36.721809369585905 39.0 35.0 40.0 30.0 41.0 21 36.69502619134107 38.0 35.0 40.0 30.0 41.0 22 36.557705256034644 38.0 35.0 40.0 30.0 41.0 23 36.44370247903957 38.0 35.0 40.0 30.0 41.0 24 36.357354227561956 38.0 35.0 40.0 30.0 41.0 25 36.28232330604998 38.0 35.0 40.0 30.0 41.0 26 36.024962401931 38.0 34.0 40.0 29.0 41.0 27 35.827434764945586 38.0 34.0 40.0 28.0 41.0 28 35.71523918482634 38.0 34.0 40.0 27.0 41.0 29 35.55114412423375 38.0 34.0 40.0 27.0 41.0 30 35.3520639048353 38.0 34.0 40.0 27.0 41.0 31 35.160782809336766 38.0 34.0 40.0 27.0 41.0 32 35.008353617618866 37.0 33.0 40.0 26.0 41.0 33 35.16544395143541 38.0 33.0 40.0 26.0 41.0 34 35.17654061553329 38.0 33.0 40.0 26.0 41.0 35 35.125101704332636 38.0 33.0 40.0 26.0 41.0 36 35.04213246968108 38.0 33.0 40.0 26.0 41.0 37 34.93505294283396 38.0 33.0 40.0 25.0 41.0 38 34.840046668001975 38.0 33.0 40.0 25.0 41.0 39 34.823488806582404 38.0 33.0 40.0 25.0 41.0 40 34.702268558282384 38.0 33.0 40.0 24.0 41.0 41 34.60526950092171 38.0 33.0 40.0 24.0 41.0 42 34.49773958938043 38.0 33.0 40.0 24.0 41.0 43 34.114515400780135 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 3.0 15 8.0 16 27.0 17 64.0 18 118.0 19 258.0 20 532.0 21 1012.0 22 1768.0 23 2982.0 24 4781.0 25 7307.0 26 10315.0 27 14429.0 28 19605.0 29 25213.0 30 31661.0 31 38714.0 32 46307.0 33 55604.0 34 67376.0 35 81503.0 36 101652.0 37 130693.0 38 158975.0 39 82779.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.43761775918904 25.12965534254698 14.64565022309885 21.78707667516513 2 21.202481868621202 25.6800752300866 31.78188254012441 21.335560361167786 3 22.307848123038763 26.553233094448387 30.670292376616658 20.46862640589619 4 16.882070502178934 19.446773695270622 34.56295144558776 29.108204356962688 5 13.040108001797012 40.08299299866808 34.27948067702552 12.597418322509391 6 31.42496964429794 38.846811491373096 15.427712690776959 14.300506173552009 7 25.141989998743902 34.07850499440414 23.15384711137063 17.62565789548133 8 26.076368496156455 35.38541274136037 20.670054736451398 17.86816402603178 9 25.77399967635673 13.97867349259751 22.24979602552482 37.997530805520945 10 15.946107736997972 28.46997077025967 34.83838771332449 20.745533779417872 11 33.74909046055796 23.185079818805033 23.098171415509302 19.96765830512771 12 19.424141298579027 28.130032171951896 31.629792834356884 20.816033695112193 13 29.527356343691054 21.611901924772177 27.355777881132386 21.504963850404383 14 20.844776838910523 22.847857108100246 28.25643410747446 28.05093194551477 15 23.562588195620858 30.139902160149102 24.537931331045197 21.75957831318484 16 22.317014243698857 28.28789313887578 26.991509456381145 22.403583161044214 17 20.789780114949945 28.566271618182416 28.245910043012866 22.398038223854773 18 21.118628838878838 27.05725656877023 30.066460032884873 21.757654559466054 19 21.460038542971567 27.070270196867902 30.980695697241906 20.48899556291863 20 22.599353392426522 26.377492534138142 30.307947705584205 20.71520636785113 21 22.649597313081866 26.73995036715405 29.61222783128454 20.998224488479543 22 22.257830526350332 26.834893271275302 30.01508449239495 20.892191709979414 23 21.68183603054921 27.16464729107186 30.02425061305505 21.129266065323886 24 21.211421665314383 27.236844636518047 29.950582161823903 21.601151536343668 25 21.864366309866934 27.34672492245575 29.919462616372954 20.86944615130436 26 21.75640977764802 27.47176891417682 29.451085166840368 21.32073614133479 27 21.83426522226711 27.54747428111021 29.358405502388287 21.2598549942344 28 21.510282463626908 27.7564844645571 29.71690266598317 21.01633040583282 29 21.172607104988295 27.475955907564764 30.087168675857683 21.26426831158926 30 21.232130308287193 27.79235681331328 30.091468831229086 20.88404404717044 31 21.75855985533372 27.43657553732139 29.785478827958705 21.019385779386187 32 21.614617812375165 27.646943664569772 29.384206434616704 21.354232088438355 33 21.66995402228612 27.612202935648174 29.44327698998177 21.274566052083934 34 21.81695143879804 27.644680424900614 29.604645978392853 20.933722157908495 35 21.540496713210192 27.71993314390017 29.84115452382003 20.898415619069606 36 21.338389410754235 27.22699954395721 29.971856614714 21.462754430574556 37 21.40538130496136 26.91342768779514 30.10527459321096 21.57591641403254 38 21.33782360083695 26.941491859692718 30.127228018001805 21.593456521468525 39 21.66655916278238 26.725012985337603 30.19614366592772 21.4122841859523 40 21.04326295789582 26.717657456412837 30.472145743581734 21.766933842109612 41 20.9479805678242 26.422983651488252 30.546153680763254 22.082882099924294 42 20.42732228193403 27.200859125778415 30.152689464279852 22.219129128007705 43 20.34494035797662 26.685066805176934 30.47327736341631 22.496715473430132 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 181.0 1 197.0 2 213.0 3 376.0 4 539.0 5 539.0 6 968.0 7 1397.0 8 1476.5 9 1556.0 10 2355.5 11 3155.0 12 3155.0 13 5512.5 14 7870.0 15 11947.0 16 16024.0 17 15209.5 18 14395.0 19 14395.0 20 17138.0 21 19881.0 22 17653.0 23 15425.0 24 17939.5 25 20454.0 26 20454.0 27 22806.5 28 25159.0 29 26902.5 30 28646.0 31 31508.0 32 34370.0 33 34370.0 34 37939.5 35 41509.0 36 45016.0 37 48523.0 38 50410.0 39 52297.0 40 52297.0 41 54988.5 42 57680.0 43 59532.0 44 61384.0 45 64847.0 46 68310.0 47 68310.0 48 68546.5 49 68783.0 50 63942.0 51 59101.0 52 55653.0 53 52205.0 54 52205.0 55 47945.5 56 43686.0 57 40335.5 58 36985.0 59 33711.0 60 30437.0 61 30437.0 62 26781.0 63 23125.0 64 19938.0 65 16751.0 66 14177.5 67 11604.0 68 11604.0 69 9919.0 70 8234.0 71 7025.5 72 5817.0 73 4632.0 74 3447.0 75 3447.0 76 2663.0 77 1879.0 78 1492.0 79 1105.0 80 860.5 81 616.0 82 616.0 83 494.5 84 373.0 85 309.5 86 246.0 87 207.0 88 168.0 89 168.0 90 142.5 91 117.0 92 70.0 93 23.0 94 20.5 95 18.0 96 18.0 97 9.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 883689.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.671719774578136 #Duplication Level Percentage of deduplicated Percentage of total 1 82.77651815022085 49.3941719497526 2 10.13217160750974 12.092082097425163 3 2.8788571073156115 5.153590637363694 4 1.2298770851492566 2.9355552312880566 5 0.6439450262472322 1.92126535782291 6 0.44274265456375705 1.5851529369228814 7 0.2860829089522723 1.1949741422707298 8 0.20532368221122918 0.9801613782394402 9 0.17094612676145188 0.9180584435392982 >10 1.0866746118684587 12.332011504492725 >50 0.10525543640693569 4.338556252045581 >100 0.03894588391816893 3.959020959593508 >500 0.0018997991965079767 0.8137288397541435 >1k 3.7995983930159537E-4 0.7777923613197518 >5k 3.7995983930159537E-4 1.6038779081696326 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7238 0.8190664362688683 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6910 0.7819493056946505 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4233 0.47901467597763464 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2628 0.29738969252757474 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 975 0.11033293387153172 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 1.1316198345798125E-4 0.0 12 0.0 0.0 0.0 1.1316198345798125E-4 0.0 13 0.0 0.0 0.0 3.3948595037394376E-4 0.0 14 0.0 0.0 0.0 3.3948595037394376E-4 0.0 15 0.0 0.0 0.0 3.3948595037394376E-4 0.0 16 0.0 0.0 0.0 5.658099172899063E-4 0.0 17 0.0 0.0 0.0 9.0529586766385E-4 0.0 18 0.0 0.0 0.0 9.0529586766385E-4 0.0 19 0.0 0.0 0.0 0.0011316198345798125 0.0 20 0.0 0.0 0.0 0.001244781818037794 0.0 21 0.0 0.0 0.0 0.0018105917353277 0.0 22 0.0 0.0 0.0 0.0032816975202814565 0.0 23 0.0 0.0 0.0 0.0054317752059831 0.0 24 0.0 0.0 0.0 0.011316198345798126 0.0 25 0.0 0.0 0.0 0.015276867766827469 0.0 26 0.0 0.0 0.0 0.02150077685701644 0.0 27 0.0 0.0 0.0 0.07072623966123828 0.0 28 0.0 0.0 0.0 0.12108332230003994 0.0 29 0.0 0.0 0.0 0.1768721801448247 0.0 30 0.0 0.0 0.0 0.26479904129167614 0.0 31 0.0 0.0 0.0 0.4351078263959379 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1860 0.0 27.053762 1 TACCGTC 60 1.3368226E-6 24.666666 7 ACGTTTA 75 3.7387326E-7 22.2 26 CGAACGT 50 2.7014175E-4 22.199999 4 TCGAACG 50 2.7014175E-4 22.199999 3 GTATACT 75 9.261794E-6 19.733334 4 GTAGCAC 50 0.007033627 18.499998 3 ACGACTT 50 0.007033627 18.499998 21 GTATCAA 2755 0.0 18.399273 2 CGAACGA 95 3.6044767E-6 17.526316 16 GACCGTC 95 3.6044767E-6 17.526316 22 CGAATTA 65 0.0015795429 17.076923 15 CGGGCGT 110 7.802573E-7 16.818182 6 TCTAGAC 90 4.4440858E-5 16.444445 3 GGGCGTC 115 1.2413238E-6 16.086956 7 TATACGG 115 1.2413238E-6 16.086956 2 ACGGACC 150 4.663889E-9 16.033333 8 GGCGTCG 105 9.338128E-6 15.857142 8 TCTACAC 175 1.3096724E-10 15.857142 3 CCGAATT 70 0.002591858 15.857142 14 >>END_MODULE