##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088365_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2260932 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.42373720218034 31.0 31.0 34.0 30.0 34.0 2 31.616508590262775 31.0 31.0 34.0 30.0 34.0 3 31.6948771568539 31.0 31.0 34.0 30.0 34.0 4 35.47821296704191 37.0 35.0 37.0 33.0 37.0 5 35.31887690563007 37.0 35.0 37.0 33.0 37.0 6 35.35464224487954 37.0 35.0 37.0 32.0 37.0 7 35.227797209292454 37.0 35.0 37.0 32.0 37.0 8 35.26889088216718 37.0 35.0 37.0 32.0 37.0 9 36.75402135048732 39.0 37.0 39.0 32.0 39.0 10 36.64102502861652 39.0 35.0 39.0 32.0 39.0 11 36.74672657116623 39.0 35.0 39.0 32.0 39.0 12 36.61559171173658 39.0 35.0 39.0 32.0 39.0 13 36.648385709963854 39.0 35.0 39.0 32.0 39.0 14 37.645113165721035 39.0 36.0 41.0 32.0 41.0 15 37.638083321391356 39.0 36.0 41.0 32.0 41.0 16 37.58608971875315 39.0 36.0 41.0 32.0 41.0 17 37.680988636544576 39.0 36.0 41.0 32.0 41.0 18 37.668233277250266 39.0 37.0 41.0 32.0 41.0 19 37.74199312495909 40.0 37.0 41.0 32.0 41.0 20 37.70799342925838 40.0 37.0 41.0 32.0 41.0 21 37.654216048956805 39.0 37.0 41.0 32.0 41.0 22 37.549039511139654 39.0 36.0 41.0 32.0 41.0 23 37.43367160091502 39.0 36.0 41.0 32.0 41.0 24 37.365558981871196 39.0 36.0 41.0 31.0 41.0 25 37.30882043334342 39.0 36.0 41.0 31.0 41.0 26 37.072555477121824 39.0 36.0 41.0 31.0 41.0 27 36.91043251190217 39.0 35.0 40.0 31.0 41.0 28 36.80139031160601 39.0 35.0 40.0 30.0 41.0 29 36.646019871451244 39.0 35.0 40.0 30.0 41.0 30 36.46091434859606 38.0 35.0 40.0 30.0 41.0 31 36.19449678274269 38.0 35.0 40.0 30.0 41.0 32 36.05380701409861 38.0 35.0 40.0 30.0 41.0 33 36.09201205520555 38.0 35.0 40.0 30.0 41.0 34 36.0345322194564 38.0 35.0 40.0 30.0 41.0 35 35.94507043997785 38.0 35.0 40.0 29.0 41.0 36 35.85610668520769 38.0 35.0 40.0 29.0 41.0 37 35.721207006668045 38.0 35.0 40.0 28.0 41.0 38 35.591702890666326 38.0 35.0 40.0 27.0 41.0 39 35.50323583371813 38.0 34.0 40.0 26.0 41.0 40 35.330581813163775 38.0 34.0 40.0 25.0 41.0 41 35.18034996187413 38.0 34.0 40.0 25.0 41.0 42 34.99401618447614 38.0 34.0 40.0 24.0 41.0 43 34.656343490206694 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 0.0 13 1.0 14 3.0 15 9.0 16 15.0 17 55.0 18 123.0 19 302.0 20 633.0 21 1330.0 22 2499.0 23 4229.0 24 7295.0 25 11685.0 26 17647.0 27 26074.0 28 36900.0 29 50147.0 30 64495.0 31 80139.0 32 96231.0 33 118429.0 34 145463.0 35 176419.0 36 225472.0 37 312117.0 38 404236.0 39 478982.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.53729523930839 22.409342695844014 13.73791869901439 22.315443365833204 2 17.852151236746614 23.045142445681694 36.53143924717771 22.57126707039398 3 19.804531936387296 26.295173848660642 32.23595402250046 21.664340192451608 4 12.755226605665273 15.818565087317973 35.686743343010754 35.739464964006 5 11.471950505366815 40.459111552227135 34.5173583283354 13.551579614070658 6 31.173604513536894 36.44090136280083 15.741074919546453 16.644419204115824 7 24.68145879663785 35.16355202190955 21.704412162771813 18.450577018680793 8 27.69446405287731 33.382605049599015 20.33692300343398 18.586007894089693 9 25.533717953481133 13.700942797041222 23.597348350149407 37.16799089932824 10 16.425173335597886 27.581103721827986 33.63834029506416 22.355382647509963 11 31.401696291617792 22.194608241203184 25.0717403265556 21.331955140623425 12 20.478855622371658 27.5398817832646 31.703695644097213 20.277566950266525 13 31.024152871470704 21.08617154341661 28.539425334331153 19.350250250781535 14 20.964009532352147 22.68232746495693 28.572774413383506 27.780888589307416 15 23.04925579362847 28.942666121758638 26.912131811129214 21.09594627348368 16 21.69636238506952 28.441810722303902 27.311259250609925 22.550567642016656 17 19.404077610472143 27.082680947503064 28.11283134565745 25.400410096367338 18 20.567624324835954 26.47753227430104 32.24449032522871 20.7103530756343 19 19.870522421726967 24.944359228848988 33.63316543796983 21.551952911454215 20 24.121335803111283 23.983516532120383 32.27514140186437 19.62000626290397 21 23.55900133219398 24.893274101122902 31.128224997478917 20.419499569204206 22 22.057983168003283 24.54094152323024 32.05832815847624 21.342747150290233 23 21.009610196149197 26.27818970229976 33.00223093839178 19.709969163159265 24 19.685731370956756 25.56883621444608 31.61390966203318 23.13152275256399 25 20.85171071045038 26.451171463803426 32.52932861315599 20.167789212590208 26 22.25033747144983 25.56941119856767 31.127605783809507 21.052645546172993 27 20.809869558217585 26.931813959906798 30.909332965343495 21.34898351653212 28 20.658692963786613 26.34435710583069 31.024949003331372 21.972000927051322 29 19.660697446893582 26.279781966021094 32.11662270249614 21.94289788458919 30 19.17169556625321 26.76427243278436 33.67310471964659 20.390927281315847 31 20.481465165692732 26.132762949084714 32.68652042608977 20.699251459132782 32 21.518692291497487 26.34081874200551 30.72414384864295 21.416345117854053 33 22.39877183391628 26.186634538323133 30.304449669428358 21.110143958332227 34 20.817830876824246 28.637128405454032 30.412590913835537 20.132449803886185 35 19.51310344583561 29.542861085605406 30.63917888729073 20.304856581268254 36 20.251427287507983 26.216533712645933 32.562146937634566 20.96989206221151 37 20.5247216634556 26.46368842583501 31.661367966838455 21.350221943870935 38 20.68934404042227 26.075352996021113 32.17018468489986 21.065118278656765 39 21.557481604931063 25.505809108809995 32.27407989271681 20.662629393542133 40 19.86831094433623 26.252315416828104 31.475073111442537 22.40430052739313 41 20.79996213950707 25.75150424692118 31.42584562472467 22.02268798884708 42 18.513692583412507 27.35915985089335 31.828555657578377 22.298591908115768 43 19.114374072285234 27.027172864995496 31.465740676853613 22.39271238586565 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 181.0 1 258.5 2 336.0 3 1061.5 4 1787.0 5 1787.0 6 3122.0 7 4457.0 8 4748.5 9 5040.0 10 7672.5 11 10305.0 12 10305.0 13 18303.0 14 26301.0 15 43254.5 16 60208.0 17 58425.0 18 56642.0 19 56642.0 20 60295.5 21 63949.0 22 52002.5 23 40056.0 24 44560.5 25 49065.0 26 49065.0 27 53366.0 28 57667.0 29 60279.0 30 62891.0 31 66345.0 32 69799.0 33 69799.0 34 76207.0 35 82615.0 36 89614.5 37 96614.0 38 100766.0 39 104918.0 40 104918.0 41 109738.5 42 114559.0 43 131378.0 44 148197.0 45 183208.0 46 218219.0 47 218219.0 48 220388.5 49 222558.0 50 202531.0 51 182504.0 52 172055.0 53 161606.0 54 161606.0 55 141598.0 56 121590.0 57 102667.0 58 83744.0 59 73744.5 60 63745.0 61 63745.0 62 55529.5 63 47314.0 64 41352.0 65 35390.0 66 30083.5 67 24777.0 68 24777.0 69 20811.0 70 16845.0 71 14080.5 72 11316.0 73 9061.5 74 6807.0 75 6807.0 76 5311.0 77 3815.0 78 3020.5 79 2226.0 80 1789.5 81 1353.0 82 1353.0 83 986.0 84 619.0 85 515.0 86 411.0 87 335.0 88 259.0 89 259.0 90 222.0 91 185.0 92 109.5 93 34.0 94 27.5 95 21.0 96 21.0 97 11.5 98 2.0 99 3.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2260932.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.200818191030855 #Duplication Level Percentage of deduplicated Percentage of total 1 75.23293842303457 32.501244947905356 2 13.296757197539982 11.488615804424112 3 4.72748978306731 6.126942798547403 4 2.167233611860451 3.7450506097389793 5 1.1245366684534035 2.4290452081501512 6 0.7094078263888082 1.8388199118670365 7 0.4612496654610045 1.394845405677826 8 0.3190599977801441 1.1026922364904572 9 0.24720195264610065 0.9611393951458812 >10 1.4509741950494854 12.006312485582624 >50 0.15387605002488128 4.6498763642694385 >100 0.09572031814117372 7.745202161830335 >500 0.00585299773869592 1.7425209494591032 >1k 0.006366418592967493 5.108455169110037 >5k 9.241575376888295E-4 2.7678672804027578 >10k+ 4.1073668341725755E-4 4.3913692713985135 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 29838 1.3197212476978522 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 28927 1.2794281296385739 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 26127 1.155585395757148 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 14101 0.6236808537364237 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9745 0.4310169434551769 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8065 0.3567113031263214 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 7568 0.33472921786236826 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 7310 0.3233179945261512 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7227 0.3196469420575232 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 6198 0.27413473735609917 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 5875 0.2598485934119204 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 5265 0.23286856924489546 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 5142 0.2274283348636757 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4616 0.20416359271309353 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4544 0.2009790652704283 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3979 0.17598937075506915 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 3774 0.16692231345303618 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3684 0.16294165414970463 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3161 0.13980960064256687 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3008 0.13304247982690323 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2821 0.12477155438553658 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2742 0.12127742010816778 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2614 0.11561603798787402 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2528 0.11181229687580166 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2465 0.10902583536346958 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2426 0.10730088299869259 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2311 0.10221448499999117 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.4229547814794964E-5 0.0 3 0.0 0.0 0.0 4.4229547814794964E-5 0.0 4 0.0 0.0 0.0 4.4229547814794964E-5 0.0 5 0.0 0.0 0.0 4.4229547814794964E-5 0.0 6 0.0 0.0 0.0 4.4229547814794964E-5 0.0 7 0.0 0.0 0.0 4.4229547814794964E-5 0.0 8 0.0 0.0 0.0 4.4229547814794964E-5 0.0 9 0.0 0.0 0.0 4.4229547814794964E-5 0.0 10 4.4229547814794964E-5 0.0 0.0 4.4229547814794964E-5 0.0 11 4.4229547814794964E-5 0.0 0.0 1.3268864344438488E-4 0.0 12 8.845909562958993E-5 0.0 0.0 5.749841215923345E-4 0.0 13 8.845909562958993E-5 0.0 0.0 7.076727650367194E-4 0.0 14 8.845909562958993E-5 0.0 0.0 8.845909562958992E-4 0.0 15 8.845909562958993E-5 0.0 0.0 0.0014595750778882337 0.0 16 8.845909562958993E-5 0.0 0.0 0.0025210842254433127 0.0 17 1.3268864344438488E-4 0.0 0.0 0.003980659303331547 0.0 18 1.3268864344438488E-4 0.0 0.0 0.004467184329294291 0.0 19 1.7691819125917986E-4 0.0 0.0 0.0051306275465162155 0.0 20 1.7691819125917986E-4 0.0 0.0 0.006590202624404449 0.0 21 1.7691819125917986E-4 0.0 0.0 0.009420893684551327 0.0 22 1.7691819125917986E-4 0.0 0.0 0.01596686676114098 0.0 23 2.6537728688876976E-4 0.0 0.0 0.025033924063173948 0.0 24 3.096068347035647E-4 0.0 0.0 0.03870085433794559 0.0 25 3.538363825183597E-4 0.0 0.0 0.04591027063175717 0.0 26 3.538363825183597E-4 0.0 0.0 0.055508082507567676 0.0 27 3.538363825183597E-4 0.0 0.0 0.12627535901123962 0.0 28 3.538363825183597E-4 0.0 0.0 0.20062522888790993 0.0 29 3.538363825183597E-4 0.0 0.0 0.2904554404997585 0.0 30 3.9806593033315466E-4 0.0 0.0 0.4656486793941613 0.0 31 3.9806593033315466E-4 0.0 0.0 0.7165186745996783 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7260 0.0 27.342285 1 GTATTGG 760 0.0 21.421053 1 ATTGGAC 780 0.0 20.871796 3 TCTAACG 115 3.0540832E-9 19.304348 2 CGTCTGT 725 0.0 18.882757 34 ATCACGT 135 1.1532393E-9 17.814816 23 TTGGACC 1320 0.0 17.378788 4 GTATTAG 230 0.0 16.891304 1 CGAATTA 165 5.4569682E-11 16.818182 15 GGACCCT 1315 0.0 16.319391 6 TGGACCC 1350 0.0 16.17037 5 GTATCAA 12350 0.0 16.148178 2 CAATGCG 150 4.6784407E-9 16.033333 19 GTCGACG 70 0.0025935334 15.857143 36 CGACGAG 120 1.9374183E-6 15.416666 24 TGCGACG 120 1.9374183E-6 15.416666 22 GCCGTCA 180 2.0190782E-10 15.416666 13 GCGTTAT 145 5.3525582E-8 15.310345 1 TATTGGA 1055 0.0 15.255924 2 TCGACGA 85 5.3670007E-4 15.235294 37 >>END_MODULE