##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088364_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3947341 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.412348464447334 31.0 31.0 34.0 30.0 34.0 2 31.603699553699567 31.0 31.0 34.0 30.0 34.0 3 31.686993345647107 31.0 31.0 34.0 30.0 34.0 4 35.471434568232134 37.0 35.0 37.0 33.0 37.0 5 35.30447508842028 37.0 35.0 37.0 33.0 37.0 6 35.334129734421225 37.0 35.0 37.0 32.0 37.0 7 35.20962769621373 37.0 35.0 37.0 32.0 37.0 8 35.2435340650833 37.0 35.0 37.0 32.0 37.0 9 36.74450699850862 39.0 37.0 39.0 32.0 39.0 10 36.61844770948342 39.0 35.0 39.0 32.0 39.0 11 36.721457305056745 39.0 35.0 39.0 32.0 39.0 12 36.58317231777037 39.0 35.0 39.0 32.0 39.0 13 36.620886059755165 39.0 35.0 39.0 32.0 39.0 14 37.62479958027442 39.0 36.0 41.0 32.0 41.0 15 37.61569522369616 39.0 36.0 41.0 32.0 41.0 16 37.57010681367533 39.0 36.0 41.0 32.0 41.0 17 37.63778021711324 39.0 36.0 41.0 32.0 41.0 18 37.616769871161374 39.0 36.0 41.0 32.0 41.0 19 37.67562087997971 40.0 37.0 41.0 32.0 41.0 20 37.640924105619455 39.0 37.0 41.0 32.0 41.0 21 37.587879537136516 39.0 36.0 41.0 32.0 41.0 22 37.480380590377166 39.0 36.0 41.0 32.0 41.0 23 37.36461785287869 39.0 36.0 41.0 31.0 41.0 24 37.29391988176344 39.0 36.0 41.0 31.0 41.0 25 37.23551448937398 39.0 36.0 41.0 31.0 41.0 26 37.00512927563137 39.0 36.0 41.0 31.0 41.0 27 36.84651465378846 39.0 35.0 40.0 31.0 41.0 28 36.72434228509774 39.0 35.0 40.0 30.0 41.0 29 36.57664564576508 38.0 35.0 40.0 30.0 41.0 30 36.39183617528863 38.0 35.0 40.0 30.0 41.0 31 36.15248492592862 38.0 35.0 40.0 30.0 41.0 32 36.01053671319504 38.0 35.0 40.0 30.0 41.0 33 36.06233157966337 38.0 35.0 40.0 30.0 41.0 34 36.02723402918572 38.0 35.0 40.0 30.0 41.0 35 35.94437445358787 38.0 35.0 40.0 29.0 41.0 36 35.861502717905545 38.0 35.0 40.0 29.0 41.0 37 35.727647801393395 38.0 35.0 40.0 28.0 41.0 38 35.602695080055156 38.0 34.0 40.0 27.0 41.0 39 35.533589066665385 38.0 34.0 40.0 27.0 41.0 40 35.358414436452286 38.0 34.0 40.0 26.0 41.0 41 35.21651258404075 38.0 34.0 40.0 25.0 41.0 42 35.03628113203293 38.0 34.0 40.0 24.0 41.0 43 34.69885500137941 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 5.0 14 6.0 15 16.0 16 41.0 17 116.0 18 238.0 19 584.0 20 1265.0 21 2573.0 22 4624.0 23 8175.0 24 13523.0 25 20898.0 26 32072.0 27 46565.0 28 65081.0 29 88159.0 30 112985.0 31 139334.0 32 170134.0 33 207142.0 34 253929.0 35 309903.0 36 394059.0 37 539905.0 38 706823.0 39 829185.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.836745292590635 22.005496864851555 13.337079314910975 22.82067852764684 2 18.077308243701264 22.83238260895119 35.891578660166424 23.19873048718112 3 20.049369942956538 26.016272726374538 31.645049160941507 22.28930816972742 4 13.00389300037671 15.651650060129086 35.30845194271283 36.03600499678138 5 12.08400794357518 39.84147809880119 34.18448013485534 13.890033822768288 6 31.919411066842212 35.91625349824097 15.70137973891792 16.4629556959989 7 25.547932139635265 34.32231975904793 21.52915088916818 18.600597212148635 8 27.970676969636017 32.955196928768 20.25340602699387 18.820720074602118 9 25.918662714976993 13.487180357612885 22.880870945783506 37.71328598162662 10 16.57125644832813 27.144297895722712 33.458700426438966 22.825745229510193 11 32.40297709268087 21.732984305130973 24.545991846156692 21.318046756031464 12 20.801065831403974 26.907657585194695 31.366633893550116 20.92464268985122 13 31.12163352494755 20.490730342273444 28.095849839170217 20.291786293608784 14 21.351942991497314 22.066271953702504 27.941746101996255 28.640038952803927 15 23.479273769355117 28.608980070381556 26.140710924138556 21.771035236124774 16 22.512192384696434 27.852420148145296 26.69042274280332 22.944964724354953 17 20.35544940252185 26.60808883752379 27.53339526531911 25.503066494635252 18 21.446284980192996 25.82237004606392 31.351611122525263 21.379733851217818 19 20.644530077335606 24.603144243175343 32.47857228448214 22.273753395006917 20 24.54865186463495 23.68201784441729 31.180964603767446 20.588365687180307 21 24.1310796305665 24.644868533020077 30.173374937711234 21.05067689870219 22 22.66670145801946 24.27740598038021 31.139468315506562 21.91642424609376 23 21.643962353391817 25.80836061541174 32.04681328519629 20.500863746000157 24 20.53739466643495 25.158480100908438 30.60634994544429 23.697775287212327 25 21.69351469761543 25.84420753109498 31.326277613208486 21.136000158081096 26 22.76947950531763 25.281930291809097 30.33773874615849 21.610851456714787 27 21.605252751155778 26.34439233904545 30.103986455692578 21.946368454106192 28 21.435847574354483 25.845626207616725 30.251680815009397 22.466845403019402 29 20.3665454796026 25.897635902244065 31.20209275053764 22.533725867615694 30 20.05408197568946 26.27226783802058 32.53709269100389 21.13655749528607 31 21.285974533236423 25.7794550812813 31.47511198044456 21.459458405037722 32 22.22503705659075 25.682301073051455 29.87502219848754 22.217639671870256 33 22.808366442118885 25.672319670380645 29.598177608673787 21.921136278826683 34 21.581591253453908 28.029577378797526 29.539251866002964 20.849579501745605 35 20.498507729633694 28.857881799418898 29.80054168109621 20.843068789851195 36 21.1284507723047 26.0143980466851 31.351687123053214 21.50546405795699 37 21.323772129137055 26.14240826926278 30.691495870257977 21.842323731342187 38 21.352626996248866 25.624616672337154 31.338868367338925 21.68388796407506 39 22.321279058485192 25.177733567989186 31.125180216251902 21.37580715727372 40 20.781179026590305 25.8895291792627 30.49723852081693 22.83205327333007 41 21.57442187031726 25.602044515535898 30.459263590351078 22.364270023795765 42 19.611024231248326 26.926480382617058 30.91769877494749 22.544796611187127 43 20.014561701155284 26.6366397025238 30.456375570288962 22.892423026031956 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 279.0 1 413.0 2 547.0 3 1768.5 4 2990.0 5 2990.0 6 5096.5 7 7203.0 8 7805.0 9 8407.0 10 12410.0 11 16413.0 12 16413.0 13 29497.0 14 42581.0 15 68292.0 16 94003.0 17 91585.5 18 89168.0 19 89168.0 20 94961.5 21 100755.0 22 82507.5 23 64260.0 24 70933.0 25 77606.0 26 77606.0 27 85110.5 28 92615.0 29 96902.5 30 101190.0 31 108576.0 32 115962.0 33 115962.0 34 125909.0 35 135856.0 36 147391.5 37 158927.0 38 168295.0 39 177663.0 40 177663.0 41 186468.0 42 195273.0 43 219533.0 44 243793.0 45 301599.5 46 359406.0 47 359406.0 48 368969.5 49 378533.0 50 349983.0 51 321433.0 52 306666.5 53 291900.0 54 291900.0 55 257303.5 56 222707.0 57 191691.0 58 160675.0 59 144674.0 60 128673.0 61 128673.0 62 114976.5 63 101280.0 64 90213.5 65 79147.0 66 69516.5 67 59886.0 68 59886.0 69 51388.0 70 42890.0 71 37301.0 72 31712.0 73 25128.0 74 18544.0 75 18544.0 76 14512.5 77 10481.0 78 8275.0 79 6069.0 80 4928.0 81 3787.0 82 3787.0 83 2840.5 84 1894.0 85 1507.0 86 1120.0 87 1023.0 88 926.0 89 926.0 90 753.0 91 580.0 92 359.0 93 138.0 94 97.0 95 56.0 96 56.0 97 32.5 98 9.0 99 6.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3947341.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.690295407808165 #Duplication Level Percentage of deduplicated Percentage of total 1 71.85386342602895 27.08193338719334 2 13.978087097803519 10.53676463904573 3 5.389851270860289 6.094352598086237 4 2.673222906526429 4.030182441516026 5 1.546163094793873 2.913767189571599 6 0.9401616870215899 2.126098302896821 7 0.6189642741772399 1.6330262438433818 8 0.4327852355863916 1.304944270191116 9 0.3366894775767874 1.1420933283512749 >10 1.8878130235995598 13.590893944610984 >50 0.18865085856113561 5.001825624859002 >100 0.1353181850970938 9.79299536210427 >500 0.011232555533125564 2.909054837811603 >1k 0.005986212226416818 4.638334209400561 >5k 6.053473037949591E-4 1.6849661771149704 >10k+ 6.053473037949591E-4 5.518767443402953 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 46188 1.1701041283233449 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 45001 1.1400332527643293 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 40344 1.0220550998760938 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 23074 0.5845453939753369 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15770 0.39950944192558996 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 13150 0.3331356475156314 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 11569 0.2930833692858053 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 11459 0.2902966832609597 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 11141 0.2822406272982243 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 9130 0.23129494006218365 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 8856 0.22435355850938646 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 8603 0.2179441806522416 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 7927 0.20081872835409964 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 7489 0.18972265127335086 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 7230 0.18316127236030533 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 6007 0.15217839046588577 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5788 0.14663035192551138 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 5436 0.1377129566460055 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 4576 0.11592613863357637 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4560 0.11552080248450794 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 4416 0.1118727771428919 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 4347 0.11012476500003421 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 4240 0.10741407950313896 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 2.5333509316778052E-5 0.0 3 0.0 0.0 0.0 2.5333509316778052E-5 0.0 4 0.0 0.0 0.0 2.5333509316778052E-5 0.0 5 0.0 0.0 0.0 2.5333509316778052E-5 0.0 6 0.0 0.0 0.0 2.5333509316778052E-5 0.0 7 0.0 0.0 0.0 2.5333509316778052E-5 0.0 8 0.0 0.0 0.0 2.5333509316778052E-5 0.0 9 0.0 0.0 0.0 5.0667018633556105E-5 0.0 10 0.0 0.0 0.0 5.0667018633556105E-5 0.0 11 0.0 0.0 0.0 2.786686024845586E-4 0.0 12 0.0 0.0 0.0 4.0533614906844884E-4 0.0 13 0.0 0.0 0.0 5.066701863355611E-4 0.0 14 0.0 0.0 0.0 7.853387888201197E-4 0.0 15 0.0 0.0 0.0 0.0010386738819879002 0.0 16 0.0 0.0 0.0 0.0017226786335409077 0.0 17 0.0 0.0 0.0 0.0027360190062120297 0.0 18 0.0 0.0 0.0 0.0030906881366469224 0.0 19 0.0 0.0 0.0 0.003394690248448259 0.0 20 0.0 0.0 0.0 0.004129362018634823 0.0 21 0.0 0.0 0.0 0.005446704503107282 0.0 22 0.0 0.0 0.0 0.009474732484474993 0.0 23 0.0 0.0 0.0 0.01588411034161984 0.0 24 0.0 0.0 0.0 0.02515617475156061 0.0 25 0.0 0.0 0.0 0.030273543633549775 0.0 26 0.0 0.0 0.0 0.03858293468945297 0.0 27 0.0 0.0 0.0 0.10080203357145988 0.0 28 0.0 0.0 0.0 0.1649464791615419 0.0 29 0.0 0.0 0.0 0.24094700711187608 0.0 30 0.0 0.0 0.0 0.37881196481378226 0.0 31 0.0 0.0 0.0 0.5742093221740914 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11295 0.0 26.648518 1 ATTGGAC 1670 0.0 21.823353 3 GTATTGG 1725 0.0 21.771013 1 GAACCGT 125 1.8189894E-11 20.72 6 TTGGACC 2545 0.0 18.754421 4 TGGACCC 2550 0.0 17.556862 5 TATTGGA 2295 0.0 17.169935 2 GGACCCT 2680 0.0 17.050373 6 CTAGTAC 570 0.0 15.90351 3 GTATCAA 19225 0.0 15.675683 2 GACCCTC 2910 0.0 15.38488 7 TATACTG 685 0.0 15.124087 5 CCCGTAT 160 1.0988515E-8 15.031251 1 TAGTACT 630 0.0 14.976191 4 ACGGACC 500 0.0 14.799999 8 ACGTTTA 230 1.8189894E-12 14.478261 26 CGTCTGT 1045 0.0 14.16268 34 ACCCTCG 3135 0.0 14.044658 8 TCGTTTA 310 0.0 13.725807 30 TAACGGA 135 6.5762033E-6 13.703703 28 >>END_MODULE