##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088362_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 578374 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.48453249973201 31.0 30.0 31.0 27.0 34.0 2 30.665292699879316 31.0 30.0 31.0 27.0 34.0 3 30.568127197972245 31.0 30.0 33.0 27.0 34.0 4 34.4021377171173 35.0 35.0 37.0 30.0 37.0 5 34.10912662049124 35.0 33.0 37.0 30.0 37.0 6 34.41462963411218 35.0 35.0 37.0 30.0 37.0 7 34.28182456334483 35.0 35.0 37.0 30.0 37.0 8 34.412172746354436 35.0 35.0 37.0 30.0 37.0 9 35.73741385331982 37.0 35.0 39.0 30.0 39.0 10 35.44844166577336 37.0 35.0 39.0 30.0 39.0 11 35.75768274507499 37.0 35.0 39.0 30.0 39.0 12 35.46669283197377 37.0 35.0 39.0 30.0 39.0 13 35.635706307683265 37.0 35.0 39.0 30.0 39.0 14 36.3507159727097 38.0 35.0 40.0 30.0 41.0 15 36.42414423884891 38.0 35.0 40.0 30.0 41.0 16 36.24157552033805 38.0 34.0 40.0 30.0 41.0 17 36.35230490997175 38.0 35.0 40.0 30.0 41.0 18 36.35351174153748 38.0 35.0 40.0 30.0 41.0 19 36.4527693153565 38.0 35.0 40.0 30.0 41.0 20 36.43292229595383 38.0 35.0 40.0 30.0 41.0 21 36.427536507519356 38.0 35.0 40.0 30.0 41.0 22 36.27951636830148 38.0 35.0 40.0 30.0 41.0 23 36.12659282747841 38.0 34.0 40.0 29.0 41.0 24 36.01777915328144 38.0 34.0 40.0 29.0 41.0 25 35.92200029738543 38.0 34.0 40.0 29.0 41.0 26 35.618736319405784 38.0 34.0 40.0 27.0 41.0 27 35.38240999768316 38.0 34.0 40.0 27.0 41.0 28 35.20920200423947 37.0 33.0 40.0 27.0 41.0 29 35.009760120614 37.0 33.0 40.0 27.0 41.0 30 34.76991185634209 37.0 33.0 40.0 26.0 41.0 31 34.46641446538053 37.0 33.0 39.0 25.0 40.0 32 34.31953545629644 36.0 33.0 39.0 25.0 40.0 33 34.351303827627106 36.0 33.0 39.0 25.0 40.0 34 34.28911569330572 36.0 33.0 39.0 25.0 40.0 35 34.14472123574019 36.0 33.0 39.0 24.0 40.0 36 34.000228226026756 36.0 33.0 39.0 24.0 40.0 37 33.81619332819248 36.0 33.0 39.0 23.0 40.0 38 33.66147510088628 36.0 32.0 39.0 22.0 40.0 39 33.49176311521611 36.0 32.0 39.0 21.0 41.0 40 33.253787341754645 36.0 31.0 39.0 19.0 41.0 41 33.0423065352177 36.0 31.0 39.0 18.0 41.0 42 32.790941501519775 36.0 31.0 39.0 16.0 41.0 43 32.37122000643183 36.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 2.0 14 5.0 15 12.0 16 22.0 17 51.0 18 154.0 19 263.0 20 478.0 21 997.0 22 1734.0 23 2715.0 24 4275.0 25 6230.0 26 8737.0 27 11929.0 28 15938.0 29 20014.0 30 24893.0 31 29447.0 32 34299.0 33 41629.0 34 48520.0 35 58683.0 36 73022.0 37 85126.0 38 76074.0 39 33123.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.46356509801616 26.028659656208614 15.327106681835629 19.180668563939594 2 23.842185160467103 25.816340291921836 29.6486356578961 20.69283888971496 3 25.9833602478673 24.584265544440104 31.007445009630448 18.424929198062152 4 19.151967412089753 19.151794513584637 30.85806070120718 30.83817737311843 5 11.72874299328808 42.66097715319153 32.992146949897474 12.618132903622914 6 32.70167746129667 36.772572764335884 13.602789890278608 16.922959884088844 7 23.09733840041219 36.84847520808335 21.593121405872324 18.461064985632134 8 28.017684059103626 35.24812664469703 19.731523201250404 17.002666094948943 9 25.055932666406168 13.253880706947408 23.975835704924496 37.71435092172193 10 17.52412798638943 29.612845667336362 32.604681399924615 20.258344946349595 11 32.961198117481075 21.77639382129902 23.15543229813235 22.10697576308755 12 18.642435517502516 29.662294639800546 31.709585838920834 19.985684003776104 13 31.459228803507767 20.67382005415181 29.362834428933525 18.504116713406894 14 20.53895922015858 23.179983885859322 29.864412992285267 26.416643901696823 15 24.244347083375118 29.60575682862646 26.41180274355348 19.738093344444945 16 21.50442447274601 27.39905320778597 29.093631456462425 22.002890863005597 17 19.210752903830393 28.01267000245516 30.033161933281928 22.743415160432523 18 19.879697220137835 25.151026844221906 33.521735071078574 21.447540864561685 19 19.58784454349608 25.153793220303815 35.67968131347536 19.578680922724743 20 22.441707268998954 24.095654368972326 34.83801139055352 18.624626971475205 21 22.443263355545028 24.033929602644655 33.567207377925016 19.955599663885305 22 21.39463392199511 24.273394032235196 33.935481193829595 20.396490851940094 23 20.502304737073242 26.164557881232557 34.567771027051705 18.7653663546425 24 19.449525739400457 25.354182587737345 33.80234934488757 21.39394232797463 25 20.16255917451338 26.145711944174533 34.402134259147196 19.289594622164895 26 20.851041021899324 25.344500271450656 33.49372551324921 20.31073319340081 27 21.135977758336303 25.984051841887773 33.156054732750775 19.723915667025143 28 20.356205500247246 26.515887643635434 33.452575669030765 19.675331187086556 29 19.468544574963605 25.68009626988765 34.14935664466245 20.702002510486295 30 19.1718507401785 26.285932631826466 35.12000885240346 19.42220777559157 31 20.07472673391266 25.40259416917081 34.14849215213685 20.374186944779677 32 20.46426706594695 26.47439200240675 32.92782870599301 20.1335122256533 33 21.052986475878928 26.39433999453641 32.35449726301666 20.198176266567998 34 20.79052654510749 27.672405744379937 32.338936397555905 19.19813131295667 35 19.47718950021958 28.120558669649743 32.582896188279555 19.81935564185112 36 20.161003087967302 25.76741001497301 34.141576211932076 19.930010685127616 37 19.946090246103733 26.03695878445435 33.5786186792629 20.43833229017902 38 20.544146175312168 25.892415634174426 33.22953659742658 20.333901593086825 39 21.414344351578738 25.83120956336212 32.782939758702845 19.9715063263563 40 20.25125610763969 26.093496595628434 32.39962377285286 21.255623523879013 41 20.274943202841065 26.108711664078953 32.2706414880337 21.345703645046285 42 19.03785439871087 27.11273328330803 31.849633628067654 21.999778689913445 43 19.415637632397033 26.553406619246374 31.876778693371417 22.154177054985183 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 51.0 1 77.0 2 103.0 3 200.0 4 297.0 5 297.0 6 718.0 7 1139.0 8 1239.0 9 1339.0 10 2123.5 11 2908.0 12 2908.0 13 5964.0 14 9020.0 15 15141.0 16 21262.0 17 18675.0 18 16088.0 19 16088.0 20 19457.5 21 22827.0 22 17540.5 23 12254.0 24 12793.5 25 13333.0 26 13333.0 27 14102.0 28 14871.0 29 15268.0 30 15665.0 31 16603.5 32 17542.0 33 17542.0 34 18979.0 35 20416.0 36 22287.5 37 24159.0 38 25130.5 39 26102.0 40 26102.0 41 27967.5 42 29833.0 43 33017.0 44 36201.0 45 43329.0 46 50457.0 47 50457.0 48 52125.5 49 53794.0 50 48529.5 51 43265.0 52 40560.5 53 37856.0 54 37856.0 55 33324.5 56 28793.0 57 25119.5 58 21446.0 59 19116.0 60 16786.0 61 16786.0 62 14923.5 63 13061.0 64 11279.0 65 9497.0 66 8065.5 67 6634.0 68 6634.0 69 5500.5 70 4367.0 71 3643.0 72 2919.0 73 2356.0 74 1793.0 75 1793.0 76 1402.0 77 1011.0 78 783.5 79 556.0 80 439.0 81 322.0 82 322.0 83 252.0 84 182.0 85 137.0 86 92.0 87 80.5 88 69.0 89 69.0 90 58.5 91 48.0 92 27.0 93 6.0 94 5.0 95 4.0 96 4.0 97 4.0 98 4.0 99 3.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 578374.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.953797589856826 #Duplication Level Percentage of deduplicated Percentage of total 1 85.25839633033652 48.557894474337786 2 8.501911588020832 9.684323034219933 3 2.3808832007365655 4.068010196995225 4 1.05109980806461 2.394565028609966 5 0.6170648506181181 1.7572093300959772 6 0.3823643139501507 1.306625984538081 7 0.2762510303269615 1.1013481685661817 8 0.22524629899645346 1.0262905696726705 9 0.15735975143518593 0.8066011888826786 >10 1.010405562169561 10.720380806989677 >50 0.08353230556961151 3.2482836819963543 >100 0.045729362452297855 5.155617073917563 >500 0.005182661077927074 1.867572062339852 >1k 0.003658348996183817 3.4455280778237283 >5k 3.048624163486514E-4 1.011746226037032 >10k+ 6.097248326973028E-4 3.8480040949772962 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11754 2.032249029174894 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10408 1.7995276412840135 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5827 1.0074795893314705 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3636 0.6286589646145919 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 2158 0.37311497404793437 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 2150 0.3717317860069782 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1599 0.27646470968612 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 1495 0.25848326515368947 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1453 0.2512215279386694 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1423 0.2460345727850837 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 1397 0.24153921165197606 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1192 0.2060950181024735 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 1189 0.2055763225871149 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1111 0.19209023918779197 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1041 0.17998734382942524 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 809 0.1398748906416955 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 800 0.13831880409561978 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 761 0.13157576239595833 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 752 0.1300196758498826 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 725 0.12535141621165544 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 688 0.11895417152223303 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 652 0.11272982533793013 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 642 0.11100084028673489 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 617 0.10667837765874677 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 599 0.10356620456659531 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 1.7289850511952474E-4 0.0 13 0.0 0.0 0.0 1.7289850511952474E-4 0.0 14 0.0 0.0 0.0 5.186955153585742E-4 0.0 15 0.0 0.0 0.0 6.915940204780989E-4 0.0 16 0.0 0.0 0.0 6.915940204780989E-4 0.0 17 0.0 0.0 0.0 0.0015560865460757225 0.0 18 0.0 0.0 0.0 0.0015560865460757225 0.0 19 0.0 0.0 0.0 0.0017289850511952474 0.0 20 0.0 0.0 0.0 0.002593477576792871 0.0 21 0.0 0.0 0.0 0.004668259638227168 0.0 22 0.0 1.7289850511952474E-4 0.0 0.007953331235498138 0.0 23 0.0 1.7289850511952474E-4 0.0 0.010719707317410534 0.0 24 0.0 1.7289850511952474E-4 0.0 0.017635647522191523 0.0 25 0.0 1.7289850511952474E-4 0.0 0.021785211645060115 0.0 26 0.0 1.7289850511952474E-4 0.0 0.028355354839602057 0.0 27 0.0 1.7289850511952474E-4 0.0 0.07866881982938376 0.0 28 0.0 1.7289850511952474E-4 0.0 0.12759909677820924 0.0 29 0.0 1.7289850511952474E-4 0.0 0.18552009599325003 0.0 30 0.0 1.7289850511952474E-4 0.0 0.29444615421855064 0.0 31 0.0 1.7289850511952474E-4 0.0 0.4502277073312424 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2435 0.0 30.238192 1 CGCGATA 35 8.864048E-4 26.42857 14 TGCGGTC 35 8.864048E-4 26.42857 12 CGTCTGT 125 0.0 25.16 34 ACGTGCG 40 0.0019300337 23.125 9 TACTACG 40 0.0019300337 23.125 5 CCTCCGT 65 2.6790203E-6 22.76923 8 GTATCAA 3485 0.0 21.074606 2 ACTACGT 45 0.0038235444 20.555555 6 GAACCGC 45 0.0038235444 20.555555 6 GCGCGAT 55 5.138847E-4 20.181818 13 GTGTTAC 60 9.229255E-4 18.5 1 AGCCGTC 50 0.007030759 18.5 12 AACCCGT 50 0.007030759 18.5 6 ACCGACC 60 9.229255E-4 18.5 8 TGCGCGA 50 0.007030759 18.5 12 CGTAGTC 50 0.007030759 18.5 26 CTACGTG 50 0.007030759 18.5 7 GACGGCG 50 0.007030759 18.5 35 GCGATAT 50 0.007030759 18.5 15 >>END_MODULE