##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088360_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 891011 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.13414200273622 31.0 31.0 33.0 30.0 34.0 2 31.354062968919575 31.0 31.0 34.0 30.0 34.0 3 31.436149497593185 31.0 31.0 34.0 28.0 34.0 4 35.24418665987289 37.0 35.0 37.0 33.0 37.0 5 35.02248569321815 35.0 35.0 37.0 32.0 37.0 6 35.06923932476703 37.0 35.0 37.0 32.0 37.0 7 34.95455836123235 37.0 35.0 37.0 32.0 37.0 8 34.985599504383224 37.0 35.0 37.0 32.0 37.0 9 36.49709487312727 38.0 35.0 39.0 32.0 39.0 10 36.28388987341346 38.0 35.0 39.0 32.0 39.0 11 36.42568273567891 38.0 35.0 39.0 32.0 39.0 12 36.26971159727545 38.0 35.0 39.0 32.0 39.0 13 36.3302102892108 38.0 35.0 39.0 32.0 39.0 14 37.31272902354741 39.0 36.0 41.0 32.0 41.0 15 37.31573347579323 39.0 36.0 41.0 32.0 41.0 16 37.26239743392618 39.0 36.0 41.0 32.0 41.0 17 37.27669579836837 39.0 36.0 41.0 32.0 41.0 18 37.23170421016127 39.0 36.0 40.0 31.0 41.0 19 37.27495620143859 39.0 36.0 41.0 31.0 41.0 20 37.238907263771154 39.0 36.0 40.0 31.0 41.0 21 37.19158012639575 39.0 36.0 40.0 31.0 41.0 22 37.09622327894942 39.0 36.0 40.0 31.0 41.0 23 36.9968215880612 39.0 36.0 40.0 31.0 41.0 24 36.92402675163382 39.0 36.0 40.0 31.0 41.0 25 36.85007816962978 39.0 35.0 40.0 30.0 41.0 26 36.621636545452304 39.0 35.0 40.0 30.0 41.0 27 36.451459072895844 38.0 35.0 40.0 30.0 41.0 28 36.35798323477488 38.0 35.0 40.0 30.0 41.0 29 36.21935868356283 38.0 35.0 40.0 30.0 41.0 30 36.033086011283814 38.0 35.0 40.0 29.0 41.0 31 35.86352918201908 38.0 34.0 40.0 29.0 41.0 32 35.68573115258959 38.0 34.0 40.0 27.0 41.0 33 35.83703231497703 38.0 34.0 40.0 29.0 41.0 34 35.84354065213561 38.0 34.0 40.0 29.0 41.0 35 35.80464663174753 38.0 34.0 40.0 28.0 41.0 36 35.747738243411135 38.0 34.0 40.0 28.0 41.0 37 35.62045586418125 38.0 34.0 40.0 27.0 41.0 38 35.54281260276248 38.0 34.0 40.0 27.0 41.0 39 35.515988018105276 38.0 34.0 40.0 27.0 41.0 40 35.42737407282289 38.0 34.0 40.0 26.0 41.0 41 35.33350878945378 38.0 34.0 40.0 26.0 41.0 42 35.23350104544164 38.0 34.0 40.0 25.0 41.0 43 34.89077912618363 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 2.0 15 1.0 16 12.0 17 30.0 18 78.0 19 188.0 20 383.0 21 672.0 22 1286.0 23 2201.0 24 3588.0 25 5460.0 26 8352.0 27 11655.0 28 16114.0 29 21421.0 30 27291.0 31 33864.0 32 41460.0 33 50027.0 34 60377.0 35 73990.0 36 92659.0 37 121245.0 38 168504.0 39 150150.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.391096181753085 23.33192295044618 13.811950694211408 23.465030173589327 2 18.551061659171435 24.383874048693002 34.330440364933764 22.734623927201795 3 20.00805826190698 26.453433234830996 31.567287048083582 21.971221455178444 4 14.57748557537449 17.925929085050576 36.3206514846618 31.17593385491313 5 12.836990789114838 39.41589946700994 34.64873048705347 13.098379256821746 6 31.12441933937965 38.34935820096497 16.077354825024607 14.448867634630775 7 24.997558952695307 33.73201902108953 23.44898098901136 17.821441037203805 8 25.973977874571695 34.82022107471176 21.14384670896319 18.061954341753356 9 25.822801289770837 14.109365653173755 22.264708292041288 37.803124765014125 10 15.845034460854018 28.23332147414566 35.015841555266995 20.905802509733327 11 32.85907805852004 23.516095760882862 23.57961910683482 20.045207073762278 12 19.596952226179027 27.747693350587145 31.899942873881464 20.755411549352367 13 29.02725106648515 21.8064647911193 27.280134588686334 21.886149553709213 14 20.78706099026836 22.987146062169828 28.22557746200664 28.000215485555174 15 23.39645638493801 29.70726511793906 24.912262587106106 21.984015910016826 16 21.93452157156309 28.663282495951233 27.145680580823356 22.256515351662326 17 20.69570409343992 28.571925599122793 28.302905351336854 22.429464956100432 18 21.114890837486854 27.206398125275673 30.277291750606892 21.40141928663058 19 21.1642729438806 27.37732755263403 30.94271563426265 20.515683869222716 20 22.60174116817862 26.579020909955098 29.97841777486473 20.84082014700155 21 22.295459876477395 27.23165033877247 29.56405700939719 20.90883277535294 22 22.01667543947269 27.09708409884951 29.67359549994332 21.21264496173448 23 21.376616001373723 27.33221026451974 29.919383711312207 21.371790022794332 24 21.030043400137597 27.61357603890412 29.636671152208 21.719709408750283 25 21.74462492606713 27.404936639390538 29.58077958633507 21.269658848207264 26 21.68413184573479 27.593149803986705 29.35160171984409 21.37111663043442 27 21.58491870470735 27.789555908961844 29.19705817324365 21.428467213087156 28 21.15260080964208 28.08809318852405 29.5924517205736 21.166854281260274 29 20.963938716805966 27.608413364144774 30.055857896254928 21.371790022794332 30 20.857767188059405 28.27552072870032 30.078304308252086 20.788407774988187 31 21.64339160795995 27.747468886467168 29.382690000460148 21.226449505112733 32 21.1398063548037 28.16452322137437 29.40042266593791 21.295247757884024 33 21.449005680064555 27.85756853731323 29.409962391036697 21.283463391585514 34 21.366515115974998 28.014581189233358 29.406258733057168 21.21264496173448 35 20.913546521872345 28.41524964338263 29.830495919803457 20.840707914941568 36 21.28649365720513 27.524127087095447 29.706255029399188 21.483124226300237 37 21.04003205347633 27.272951736847244 30.069437975513207 21.617578234163215 38 20.996037085961902 27.19921527343658 30.251702840930133 21.553044799671383 39 21.315786224861423 26.784405579729093 30.313879402162264 21.585928793247223 40 20.708274084158333 26.890577108475654 30.63160836398204 21.769540443383974 41 20.69951998347944 26.428629949574134 30.652820223319356 22.21902984362707 42 20.02219950146519 27.298091718284063 30.44171171848608 22.23799706176467 43 20.089987665696608 26.64748246654643 30.57077858746974 22.691751280287225 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 171.0 1 176.5 2 182.0 3 442.0 4 702.0 5 702.0 6 1137.5 7 1573.0 8 1683.5 9 1794.0 10 2538.0 11 3282.0 12 3282.0 13 5580.0 14 7878.0 15 11688.0 16 15498.0 17 15058.0 18 14618.0 19 14618.0 20 16867.0 21 19116.0 22 17482.5 23 15849.0 24 18606.0 25 21363.0 26 21363.0 27 23807.0 28 26251.0 29 28287.5 30 30324.0 31 33217.0 32 36110.0 33 36110.0 34 39403.5 35 42697.0 36 46208.0 37 49719.0 38 51602.5 39 53486.0 40 53486.0 41 55172.5 42 56859.0 43 58966.0 44 61073.0 45 63889.0 46 66705.0 47 66705.0 48 68276.5 49 69848.0 50 65965.0 51 62082.0 52 56349.0 53 50616.0 54 50616.0 55 46613.0 56 42610.0 57 39882.0 58 37154.0 59 33528.0 60 29902.0 61 29902.0 62 26623.5 63 23345.0 64 20084.5 65 16824.0 66 14223.5 67 11623.0 68 11623.0 69 9905.0 70 8187.0 71 6926.5 72 5666.0 73 4574.0 74 3482.0 75 3482.0 76 2665.5 77 1849.0 78 1433.0 79 1017.0 80 845.5 81 674.0 82 674.0 83 526.0 84 378.0 85 305.0 86 232.0 87 196.0 88 160.0 89 160.0 90 125.5 91 91.0 92 52.0 93 13.0 94 9.0 95 5.0 96 5.0 97 4.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 891011.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.40089750331421 #Duplication Level Percentage of deduplicated Percentage of total 1 81.79370723590257 48.58619619935939 2 10.875603674548136 12.920412383170026 3 3.179220442310705 5.665456429024183 4 1.2859456045550728 3.055452922040532 5 0.6727551182971683 1.9981128913400061 6 0.40092354021554166 1.428913087140556 7 0.2884625928167205 1.1994455836612392 8 0.20072148224916606 0.9538428955036812 9 0.1560215593186509 0.8341038588054994 >10 0.998861261760722 11.50558661347965 >50 0.10136248319787672 4.096493398304572 >100 0.04281547387839077 4.317720070654637 >500 0.0022733879679279925 0.8796814417233287 >1k 9.472449866366635E-4 1.1650686921020372 >5k 3.7889799465466544E-4 1.3935135336906717 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6263 0.7029093916910116 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6120 0.6868602071130434 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4694 0.5268172895733049 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2429 0.27261167370548733 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 1169 0.13119927812339016 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 1053 0.11818035916503836 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1008 0.11312991646567774 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 1.1223205998579142E-4 0.0 13 0.0 0.0 0.0 1.1223205998579142E-4 0.0 14 0.0 0.0 0.0 1.1223205998579142E-4 0.0 15 0.0 0.0 0.0 1.1223205998579142E-4 0.0 16 0.0 0.0 0.0 2.2446411997158284E-4 0.0 17 0.0 0.0 0.0 6.733923599147485E-4 0.0 18 0.0 0.0 0.0 7.8562441990054E-4 0.0 19 0.0 0.0 0.0 8.978564798863313E-4 0.0 20 0.0 0.0 0.0 0.0012345526598437056 0.0 21 0.0 0.0 0.0 0.0020201770797442457 0.0 22 0.0 0.0 0.0 0.0032547297395879513 0.0 23 0.0 0.0 0.0 0.0056116029992895715 0.0 24 0.0 0.0 0.0 0.010886509818621768 0.0 25 0.0 0.0 0.0 0.014477935738167092 0.0 26 0.0 0.0 0.0 0.0222219478771867 0.0 27 0.0 0.0 0.0 0.0745220878305655 0.0 28 0.0 0.0 0.0 0.13624972082275078 0.0 29 0.0 0.0 0.0 0.20067092325459507 0.0 30 0.0 0.0 0.0 0.3087503970209122 0.0 31 0.0 0.0 0.0 0.5053809661160188 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCGAC 50 2.7014417E-4 22.2 7 TATACCG 60 3.7250767E-5 21.583332 5 CAATGCG 65 6.899905E-5 19.923077 19 ATACCGA 95 3.6045458E-6 17.526316 6 CTACGCA 65 0.0015795572 17.076923 9 TAGACTG 110 7.802755E-7 16.818182 5 TAACACA 165 5.4569682E-11 16.818182 4 ATCGTCA 100 5.8748064E-6 16.650002 10 GGTATCA 2405 0.0 16.384615 1 CGCCGGA 80 3.381497E-4 16.1875 14 CTTAACG 70 0.0025918803 15.857143 30 TACGACG 70 0.0025918803 15.857143 2 GCGCAAG 165 9.731593E-10 15.69697 1 ATGCGAC 95 7.0568276E-5 15.578948 21 ACGGACC 145 5.3400072E-8 15.310345 8 AAGACGG 170 1.4842954E-9 15.235293 5 ACCGACC 85 5.3624716E-4 15.235293 8 CCGTATA 85 5.3624716E-4 15.235293 2 CGTCAGA 110 1.4510611E-5 15.136364 1 GTACTAG 125 2.9567527E-6 14.800001 1 >>END_MODULE