##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088354_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2426512 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.767163319200563 31.0 31.0 33.0 28.0 34.0 2 31.09216150589818 31.0 31.0 34.0 28.0 34.0 3 31.1673744040829 31.0 31.0 34.0 28.0 34.0 4 35.06883172224164 35.0 35.0 37.0 32.0 37.0 5 34.75124870596148 35.0 35.0 37.0 32.0 37.0 6 34.83457572021074 35.0 35.0 37.0 32.0 37.0 7 34.65386901033253 35.0 35.0 37.0 30.0 37.0 8 34.714245385969654 35.0 35.0 37.0 31.0 37.0 9 36.185443962362434 38.0 35.0 39.0 32.0 39.0 10 35.93886657061659 37.0 35.0 39.0 30.0 39.0 11 36.06699039609118 37.0 35.0 39.0 31.0 39.0 12 35.81911731736748 37.0 35.0 39.0 30.0 39.0 13 35.90542515347132 37.0 35.0 39.0 30.0 39.0 14 36.673993369907095 38.0 36.0 40.0 30.0 41.0 15 36.8096918539863 38.0 36.0 40.0 31.0 41.0 16 36.790219046928264 38.0 36.0 40.0 31.0 41.0 17 36.850105006692736 38.0 36.0 40.0 31.0 41.0 18 36.844978306309635 38.0 36.0 40.0 31.0 41.0 19 36.93321195197056 39.0 36.0 40.0 31.0 41.0 20 36.917559443349134 39.0 36.0 40.0 31.0 41.0 21 36.82522155258247 39.0 36.0 40.0 30.0 41.0 22 36.75114196838919 39.0 35.0 40.0 30.0 41.0 23 36.64218557336621 38.0 35.0 40.0 30.0 41.0 24 36.56697926900836 38.0 35.0 40.0 30.0 41.0 25 36.44356055111205 38.0 35.0 40.0 30.0 41.0 26 36.19515831778289 38.0 35.0 40.0 30.0 41.0 27 36.061007734558906 38.0 34.0 40.0 29.0 41.0 28 35.91423079712773 38.0 34.0 40.0 29.0 41.0 29 35.698979028333675 38.0 34.0 40.0 27.0 41.0 30 35.49128254877783 38.0 34.0 40.0 27.0 41.0 31 35.295016055968404 38.0 34.0 40.0 27.0 41.0 32 35.17894327330753 38.0 33.0 40.0 27.0 41.0 33 35.01913528554567 37.0 33.0 40.0 26.0 41.0 34 35.204434183717204 38.0 33.0 40.0 27.0 41.0 35 35.14255853669794 38.0 33.0 40.0 26.0 41.0 36 35.09655711572825 38.0 33.0 40.0 26.0 41.0 37 34.99525574157474 38.0 33.0 40.0 25.0 41.0 38 34.98579442426001 38.0 33.0 40.0 25.0 41.0 39 34.91122112728064 38.0 33.0 40.0 25.0 41.0 40 34.75898614966668 38.0 33.0 40.0 24.0 41.0 41 34.65847521050792 38.0 33.0 40.0 24.0 41.0 42 34.53547190370375 38.0 33.0 40.0 24.0 41.0 43 34.174330479305276 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 4.0 14 4.0 15 14.0 16 30.0 17 98.0 18 239.0 19 534.0 20 1099.0 21 2242.0 22 4049.0 23 6903.0 24 11439.0 25 18193.0 26 26894.0 27 38872.0 28 53322.0 29 70575.0 30 89055.0 31 108374.0 32 131334.0 33 155673.0 34 186016.0 35 218722.0 36 263797.0 37 325145.0 38 393611.0 39 320273.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.9740450490251 22.69896048319563 13.894058632308434 23.432935835470833 2 18.56673282472949 23.960812886975212 35.22603638473661 22.246417903558687 3 19.744884838813903 25.676815115688694 32.55825646030186 22.02004358519554 4 13.861748880697892 16.824561345668183 36.89979691013273 32.41389286350119 5 12.304740302129147 38.649386444410744 35.71843040545441 13.327442848005697 6 31.671963707576968 37.90403674080326 14.257090012330456 16.166909539289318 7 25.029260106688117 33.63585261478204 22.537535359396532 18.797351919133305 8 25.900016154875804 34.979427260199 19.98819704992186 19.132359535003328 9 24.321618850432223 14.537822190864913 22.621647863270404 38.51891109543246 10 15.53864147385218 27.560176912374633 35.17291486710142 21.728266746671764 11 32.45366188174631 22.752370480755914 24.506781750924784 20.28718588657299 12 20.58613351180625 26.95943807407505 31.85205760367144 20.60237081044726 13 30.65676163975286 21.488663563172157 27.29143725644052 20.563137540634457 14 20.275770323822837 23.025602181237925 28.430026309369165 28.26860118557007 15 21.974381334194927 29.90663141167239 26.081676084849363 22.037311169283317 16 21.53560336812676 28.84844583500926 27.272809695563016 22.34314110130096 17 21.08841827281299 27.19487890436973 27.661680634589896 24.055022188227383 18 22.48824650362331 26.066716340162337 30.251323710742 21.193713445472348 19 22.046624949722073 25.30892078835794 31.31499040598192 21.329463855938073 20 23.07204744917808 25.02307839400753 31.2310839591974 20.673790197616988 21 22.14087546239211 25.71291631774333 31.593085053772658 20.553123166091904 22 20.72687050383431 26.065850900387055 31.245755223959332 21.961523371819304 23 21.8221051451631 26.318147200590808 31.936458587470412 19.923289066775684 24 21.75155119776865 26.04775908794187 29.984356145776324 22.216333568513157 25 21.724846198988505 26.544974844550534 30.67946913099956 21.050709825461404 26 21.431833017928614 27.121811060485175 30.54174057247605 20.904615349110163 27 20.328232458772096 27.381978741502206 30.418518433042983 21.87127036668271 28 21.04836077464278 26.79875475579762 30.410152515215255 21.742731954344343 29 21.03793428592152 26.636134500880278 29.942320499548323 22.383610713649883 30 21.30498427372294 26.996734407247935 31.101103147233562 20.597178171795566 31 22.212336060979712 26.56187152587747 31.020864516639524 20.204927896503293 32 21.563668343696634 26.67829378136189 30.04217576504876 21.71586210989272 33 21.321510052289046 26.71085080147966 30.52447298838827 21.443166157843027 34 20.560788489815835 27.258632967815533 31.22387196107005 20.956706581298587 35 20.211975048959165 29.12555140877111 30.019880387980773 20.642593154288953 36 22.26953750898409 27.04235544683068 29.71289653626275 20.975210507922483 37 21.44617459134758 27.69333100351451 29.69521683799627 21.16527756714164 38 21.204964162551022 26.515879583533895 30.778252899635362 21.500903354279725 39 20.817370777478125 26.157587516566988 31.53452362897855 21.490518076976333 40 19.682078637979124 26.77431638500036 31.144746038758512 22.398858938262 41 21.27003699136868 25.815573959658966 31.08601976829292 21.82836928067943 42 19.91310984656165 27.744062258913203 30.544913851652083 21.797914042873064 43 20.35864648516059 27.60925971105851 29.716399506781748 22.31569429699915 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 230.0 1 283.0 2 336.0 3 911.0 4 1486.0 5 1486.0 6 2555.5 7 3625.0 8 3918.5 9 4212.0 10 6582.5 11 8953.0 12 8953.0 13 16284.5 14 23616.0 15 37633.5 16 51651.0 17 50609.0 18 49567.0 19 49567.0 20 53568.5 21 57570.0 22 49477.5 23 41385.0 24 46775.0 25 52165.0 26 52165.0 27 57835.5 28 63506.0 29 68177.5 30 72849.0 31 79658.5 32 86468.0 33 86468.0 34 95098.0 35 103728.0 36 112630.5 37 121533.0 38 127896.5 39 134260.0 40 134260.0 41 137843.0 42 141426.0 43 145332.5 44 149239.0 45 155864.5 46 162490.0 47 162490.0 48 204629.5 49 246769.0 50 228756.5 51 210744.0 52 191196.5 53 171649.0 54 171649.0 55 150487.5 56 129326.0 57 110833.0 58 92340.0 59 82284.0 60 72228.0 61 72228.0 62 63833.5 63 55439.0 64 47914.5 65 40390.0 66 34003.5 67 27617.0 68 27617.0 69 23340.5 70 19064.0 71 15829.5 72 12595.0 73 10286.0 74 7977.0 75 7977.0 76 6346.0 77 4715.0 78 3589.0 79 2463.0 80 1951.5 81 1440.0 82 1440.0 83 1062.5 84 685.0 85 568.0 86 451.0 87 317.0 88 183.0 89 183.0 90 138.5 91 94.0 92 61.0 93 28.0 94 23.0 95 18.0 96 18.0 97 9.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2426512.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.804388372768734 #Duplication Level Percentage of deduplicated Percentage of total 1 75.67912603465074 36.177943326721575 2 13.207232011591428 12.627272968227606 3 4.669575031433442 6.696785350152841 4 2.0847604293614026 3.986427889174904 5 1.1063676219604859 2.6444613741627827 6 0.662494841137356 1.9002096408411533 7 0.44792696924000913 1.4989012360130642 8 0.32596155108912683 1.2465914066283774 9 0.2371110297602052 1.0201452978711578 >10 1.377825278189351 12.257487817642177 >50 0.12191646017546841 4.0604422878480655 >100 0.07033115044424024 6.196382769566212 >500 0.004165151540791762 1.3709311949704444 >1k 0.004338699521657947 3.653134031779003 >5k 6.074179330321126E-4 1.934710004339617 >10k+ 2.603219712994768E-4 2.728173404061062 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 23497 0.9683446857052427 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 22689 0.9350458600658064 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 19582 0.8070019847418847 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8648 0.35639634174485846 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 7094 0.2923537983739623 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 6939 0.2859660286040209 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 6183 0.25481019669385524 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 6093 0.2511011690855022 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 6014 0.2478454670737256 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5669 0.23362752790837218 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3778 0.15569673671508732 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3446 0.1420145459820516 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3161 0.13026929188893357 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3065 0.12631299577335697 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3047 0.12557119025168637 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2815 0.1160101413057096 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2631 0.10842724041752111 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 2500 0.10302854467647389 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.121141787058955E-5 0.0 3 0.0 0.0 0.0 8.24228357411791E-5 0.0 4 0.0 0.0 0.0 8.24228357411791E-5 0.0 5 0.0 0.0 0.0 8.24228357411791E-5 4.121141787058955E-5 6 0.0 0.0 0.0 8.24228357411791E-5 4.121141787058955E-5 7 4.121141787058955E-5 0.0 0.0 1.2363425361176867E-4 4.121141787058955E-5 8 1.2363425361176867E-4 0.0 0.0 1.2363425361176867E-4 4.121141787058955E-5 9 1.2363425361176867E-4 0.0 0.0 1.2363425361176867E-4 4.121141787058955E-5 10 1.2363425361176867E-4 0.0 0.0 1.648456714823582E-4 4.121141787058955E-5 11 1.2363425361176867E-4 0.0 0.0 1.648456714823582E-4 4.121141787058955E-5 12 1.2363425361176867E-4 0.0 0.0 3.70902760835306E-4 4.121141787058955E-5 13 1.2363425361176867E-4 0.0 0.0 4.1211417870589556E-4 4.121141787058955E-5 14 1.2363425361176867E-4 0.0 0.0 4.5332559657648507E-4 1.2363425361176867E-4 15 1.2363425361176867E-4 0.0 0.0 6.181712680588433E-4 1.2363425361176867E-4 16 1.2363425361176867E-4 0.0 0.0 8.654397752823807E-4 2.0605708935294778E-4 17 1.2363425361176867E-4 0.0 0.0 0.0013599767897294554 2.0605708935294778E-4 18 1.2363425361176867E-4 0.0 0.0 0.001566033879082403 2.8847992509412686E-4 19 1.648456714823582E-4 0.0 0.0 0.00185451380417653 2.8847992509412686E-4 20 1.648456714823582E-4 0.0 0.0 0.0025551079079765525 2.8847992509412686E-4 21 1.648456714823582E-4 0.0 0.0 0.005110215815953105 3.296913429647164E-4 22 1.648456714823582E-4 0.0 0.0 0.007912592231153195 3.296913429647164E-4 23 1.648456714823582E-4 0.0 0.0 0.01013800879616503 3.70902760835306E-4 24 1.648456714823582E-4 0.0 0.0 0.013929459240259269 3.70902760835306E-4 25 1.648456714823582E-4 0.0 0.0 0.016896681326941717 4.1211417870589556E-4 26 1.648456714823582E-4 0.0 0.0 0.02386141094707135 4.1211417870589556E-4 27 1.648456714823582E-4 0.0 0.0 0.07331511239177882 4.1211417870589556E-4 28 1.648456714823582E-4 0.0 0.0 0.13455527934747488 4.1211417870589556E-4 29 1.648456714823582E-4 0.0 0.0 0.2098897512149126 4.1211417870589556E-4 30 1.648456714823582E-4 0.0 0.0 0.32845500042859876 4.1211417870589556E-4 31 1.648456714823582E-4 0.0 0.0 0.5113100615204046 4.1211417870589556E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6200 0.0 29.361288 1 GTATTGG 730 0.0 19.00685 1 GTATCAA 10615 0.0 17.149317 2 ATTGGAC 760 0.0 16.552631 3 CGAACTA 210 0.0 15.857144 24 GCGAACT 245 0.0 15.857142 23 CGAATTA 165 9.749783E-10 15.69697 15 TATACTG 385 0.0 15.376623 5 GGACCCT 1220 0.0 14.860656 6 TTGGACC 1270 0.0 14.858267 4 AGCGAAC 250 0.0 14.799999 22 ACCGTCG 105 1.6568275E-4 14.095239 23 GTATTAG 305 0.0 13.95082 1 TGGACCC 1370 0.0 13.638686 5 TATACCG 150 1.3070949E-6 13.566667 5 CGTATAC 165 2.59839E-7 13.454545 3 GTCTATA 165 2.59839E-7 13.454545 1 TTGATAC 2090 0.0 13.366029 34 GAACCGT 85 0.009408665 13.058825 6 ACACCGC 185 7.3932824E-8 13.0 6 >>END_MODULE