##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088352_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2599520 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.844040053548348 31.0 31.0 33.0 28.0 34.0 2 31.16936665230504 31.0 31.0 34.0 28.0 34.0 3 31.238760232658336 31.0 31.0 34.0 28.0 34.0 4 35.13418938881024 35.0 35.0 37.0 32.0 37.0 5 34.831977057302886 35.0 35.0 37.0 32.0 37.0 6 34.91257155167108 35.0 35.0 37.0 32.0 37.0 7 34.742160475780146 35.0 35.0 37.0 31.0 37.0 8 34.80056279620853 35.0 35.0 37.0 32.0 37.0 9 36.28352234258632 38.0 35.0 39.0 32.0 39.0 10 36.053521419338956 38.0 35.0 39.0 30.0 39.0 11 36.17316889271866 38.0 35.0 39.0 31.0 39.0 12 35.93033329230012 37.0 35.0 39.0 30.0 39.0 13 36.00906436572906 38.0 35.0 39.0 30.0 39.0 14 36.79631008801625 38.0 36.0 40.0 31.0 41.0 15 36.93275296977904 38.0 36.0 40.0 31.0 41.0 16 36.909167461685236 38.0 36.0 40.0 31.0 41.0 17 36.97442489382655 38.0 36.0 40.0 31.0 41.0 18 36.96821682464455 38.0 36.0 40.0 31.0 41.0 19 37.04727911306703 39.0 36.0 40.0 31.0 41.0 20 37.04040130485628 39.0 36.0 40.0 31.0 41.0 21 36.950093478796084 39.0 36.0 40.0 31.0 41.0 22 36.8696894041977 39.0 36.0 40.0 31.0 41.0 23 36.76295623807472 39.0 35.0 40.0 30.0 41.0 24 36.68632939927371 38.0 35.0 40.0 30.0 41.0 25 36.566524973841325 38.0 35.0 40.0 30.0 41.0 26 36.33364082599864 38.0 35.0 40.0 30.0 41.0 27 36.2024173693605 38.0 35.0 40.0 30.0 41.0 28 36.051990367452454 38.0 34.0 40.0 29.0 41.0 29 35.849804194620546 38.0 34.0 40.0 29.0 41.0 30 35.640609420200654 38.0 34.0 40.0 27.0 41.0 31 35.43606088816397 38.0 34.0 40.0 27.0 41.0 32 35.32805479473134 38.0 34.0 40.0 27.0 41.0 33 35.16777674339878 38.0 33.0 40.0 27.0 41.0 34 35.3482154397735 38.0 34.0 40.0 27.0 41.0 35 35.28597625715517 38.0 34.0 40.0 27.0 41.0 36 35.242592478611435 38.0 34.0 40.0 26.0 41.0 37 35.14450706284237 38.0 33.0 40.0 26.0 41.0 38 35.132805671816335 38.0 33.0 40.0 25.0 41.0 39 35.053980734904904 38.0 33.0 40.0 25.0 41.0 40 34.90081053425248 38.0 33.0 40.0 25.0 41.0 41 34.79828122114852 38.0 33.0 40.0 24.0 41.0 42 34.67636794485136 38.0 33.0 40.0 24.0 41.0 43 34.323562811595984 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 1.0 15 6.0 16 33.0 17 74.0 18 204.0 19 504.0 20 1117.0 21 2179.0 22 4044.0 23 6967.0 24 11735.0 25 18279.0 26 27346.0 27 39255.0 28 54082.0 29 71687.0 30 91930.0 31 112204.0 32 135028.0 33 163745.0 34 194032.0 35 231335.0 36 280872.0 37 351653.0 38 429620.0 39 371587.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.14687326891118 22.59328645288361 13.8982581399643 23.361582138240905 2 18.419708253831477 23.66217609404813 35.60876623376623 22.309349418354156 3 19.793654213085492 25.6294238936419 32.58216901581831 21.9947528774543 4 13.747999630701052 16.783175355450236 36.89973533575429 32.569089678094414 5 12.266687696190067 38.47125623191974 35.8398858250754 13.422170246814796 6 31.638494799039822 37.61990675201576 14.194851357173633 16.54674709177079 7 25.03577583553887 33.417823290453626 22.54943220286822 18.996968671139285 8 25.782105927248107 35.14795039084139 19.843355696436266 19.226587985474243 9 24.16792330891857 14.575960177263495 22.681071890195113 38.57504462362282 10 15.582838370160646 27.54466209146304 35.11367483227673 21.75882470609959 11 32.40882932233643 22.65968332615252 24.46178525266203 20.46970209884902 12 20.555756447344127 26.93805010155721 31.745245276050966 20.7609481750477 13 30.80714901212532 21.441112205330214 27.37555394842125 20.376184834123222 14 20.20038314765803 23.101534129377733 28.24309872591863 28.45498399704561 15 21.977480457930696 29.694289715024315 26.222187173016557 22.106042654028435 16 21.38002400443159 28.870868468024867 27.449105988797935 22.300001538745615 17 21.035037237643873 26.965362836215917 27.630985720440698 24.36861420569951 18 22.669069674401428 25.914322644180466 30.230427155782607 21.1861805256355 19 22.00548562811596 25.153643749615313 31.44422816519973 21.396642457069 20 23.120960792761743 24.819697482612174 31.401720317597093 20.65762140702899 21 22.160475780144026 25.552678956114978 31.7490921400874 20.537753123653598 22 20.736251307933774 25.78672216409183 31.379062288422478 22.097964239551917 23 21.830453314458055 26.170908475410844 32.27465070474549 19.723987505385608 24 21.674655320982335 25.87369975995568 30.133216901581832 22.318428017480148 25 21.71408567735582 26.45619191235305 30.78206745860774 21.047654951683388 26 21.415915245891547 26.988444020434542 30.642541700006156 20.953099033667755 27 20.289053363697914 27.187211485197267 30.50974795346833 22.013987197636485 28 21.146519357419834 26.622953468332618 30.484358650827847 21.74616852341971 29 20.99176001723395 26.55017080076322 30.028505262510002 22.42956391949283 30 21.316973902874377 26.75463162429987 31.354596233150733 20.573798239675018 31 22.219371268541884 26.2756970517634 31.18652674339878 20.31840493629593 32 21.68261832953776 26.454653166738474 30.051124823044255 21.811603680679507 33 21.30027851295624 26.573059641780024 30.639387271496275 21.487274573767465 34 20.621537822367205 27.1743244906752 31.24638394780575 20.957753739151844 35 20.301748015018156 29.084715639810426 29.97491844648243 20.638617898688988 36 22.336469809811042 26.872807287499228 29.817235489628857 20.973487413060873 37 21.60706591986213 27.570282205945713 29.67024681479658 21.152405059395583 38 21.525627808210746 26.210838924109066 30.655044008124577 21.60848925955561 39 21.08785468086416 25.988413245522253 31.5012771588601 21.422454914753494 40 19.759263248599744 26.66649996922509 31.018572659567923 22.55566412260725 41 21.606219609774115 25.54683172277959 31.03195974641472 21.814988921031574 42 20.021580907244417 27.755431772019453 30.379031513510185 21.84395580722595 43 20.567258570813074 27.72365667507848 29.378923801317164 22.330160952791285 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 262.0 1 306.5 2 351.0 3 871.5 4 1392.0 5 1392.0 6 2405.0 7 3418.0 8 3797.5 9 4177.0 10 6562.5 11 8948.0 12 8948.0 13 16544.5 14 24141.0 15 39298.0 16 54455.0 17 53756.5 18 53058.0 19 53058.0 20 58432.5 21 63807.0 22 54954.0 23 46101.0 24 51687.5 25 57274.0 26 57274.0 27 63190.5 28 69107.0 29 74215.0 30 79323.0 31 87190.5 32 95058.0 33 95058.0 34 102203.5 35 109349.0 36 118877.5 37 128406.0 38 133865.0 39 139324.0 40 139324.0 41 142961.0 42 146598.0 43 151096.0 44 155594.0 45 164228.5 46 172863.0 47 172863.0 48 220202.5 49 267542.0 50 248036.5 51 228531.0 52 207754.0 53 186977.0 54 186977.0 55 162557.5 56 138138.0 57 117541.0 58 96944.0 59 85846.5 60 74749.0 61 74749.0 62 66242.5 63 57736.0 64 50572.0 65 43408.0 66 37336.5 67 31265.0 68 31265.0 69 26859.0 70 22453.0 71 19138.0 72 15823.0 73 13079.0 74 10335.0 75 10335.0 76 8244.5 77 6154.0 78 4678.0 79 3202.0 80 2457.0 81 1712.0 82 1712.0 83 1249.5 84 787.0 85 596.5 86 406.0 87 293.5 88 181.0 89 181.0 90 149.5 91 118.0 92 77.0 93 36.0 94 24.5 95 13.0 96 13.0 97 7.5 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2599520.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.63156936577355 #Duplication Level Percentage of deduplicated Percentage of total 1 74.15314483696723 33.09571227481356 2 13.67053983349957 12.20275293692813 3 5.058542256459934 6.773120388266647 4 2.2770239905759597 4.065086167316858 5 1.2301184043362 2.7451057445622893 6 0.7620990210754472 2.0408205193630167 7 0.48232469439236647 1.5068835638218903 8 0.3519990953008786 1.2568217630888558 9 0.25418019986204415 1.021001509939411 >10 1.517070487896141 12.797053817503237 >50 0.1427050911118269 4.4447981899807525 >100 0.08880321989024943 7.310990806966061 >500 0.00546423275632113 1.610790100820042 >1k 0.005117297343220728 4.2647556032617935 >5k 6.071369729244931E-4 2.062621156472707 >10k+ 2.602015598247828E-4 2.8016854568945475 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 26477 1.0185341909275558 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 24212 0.9314027205022465 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 21686 0.8342309349418354 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8759 0.33694682095156026 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8443 0.3247907305964178 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 8306 0.31952052686649846 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7184 0.27635871237766974 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 7096 0.27297347202560474 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 6944 0.26712623869021973 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 6551 0.2520080630270204 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4663 0.17937927001908044 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3702 0.1424109066289161 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3509 0.13498645903859174 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3465 0.13329383886255924 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3410 0.13117806364251863 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 3267 0.12567704807041302 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3226 0.12409983381547363 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3081 0.11852188096263927 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2947 0.11336708315381301 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2894 0.11132824521450115 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2873 0.11052040376684927 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 2748 0.10571182372130239 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.846864036437496E-5 0.0 3 0.0 0.0 0.0 3.846864036437496E-5 0.0 4 0.0 0.0 0.0 3.846864036437496E-5 0.0 5 0.0 0.0 0.0 3.846864036437496E-5 0.0 6 0.0 0.0 0.0 3.846864036437496E-5 0.0 7 0.0 0.0 0.0 3.846864036437496E-5 0.0 8 0.0 0.0 0.0 3.846864036437496E-5 0.0 9 0.0 0.0 0.0 1.1540592109312488E-4 0.0 10 0.0 0.0 0.0 1.5387456145749985E-4 0.0 11 0.0 0.0 0.0 2.3081184218624976E-4 0.0 12 0.0 0.0 0.0 3.077491229149997E-4 0.0 13 3.846864036437496E-5 0.0 0.0 3.8468640364374963E-4 0.0 14 3.846864036437496E-5 0.0 0.0 5.385609651012495E-4 0.0 15 3.846864036437496E-5 0.0 0.0 8.078414476518742E-4 0.0 16 3.846864036437496E-5 0.0 0.0 0.001000184649473749 0.0 17 3.846864036437496E-5 0.0 0.0 0.0014618083338462486 0.0 18 3.846864036437496E-5 0.0 0.0 0.0021157752200406227 3.846864036437496E-5 19 3.846864036437496E-5 0.0 0.0 0.0028082107465993724 3.846864036437496E-5 20 3.846864036437496E-5 0.0 0.0 0.003885332676801871 3.846864036437496E-5 21 7.693728072874992E-5 0.0 0.0 0.0070782298270449925 3.846864036437496E-5 22 7.693728072874992E-5 0.0 0.0 0.012309964916599988 3.846864036437496E-5 23 7.693728072874992E-5 0.0 0.0 0.01550286206684311 3.846864036437496E-5 24 7.693728072874992E-5 0.0 0.0 0.019965224349110605 3.846864036437496E-5 25 7.693728072874992E-5 0.0 0.0 0.023465870622268726 3.846864036437496E-5 26 7.693728072874992E-5 0.0 0.0 0.029813196282390594 3.846864036437496E-5 27 7.693728072874992E-5 0.0 0.0 0.07762971625530868 3.846864036437496E-5 28 7.693728072874992E-5 0.0 0.0 0.1350249276789561 3.846864036437496E-5 29 7.693728072874992E-5 0.0 0.0 0.19934449436819104 3.846864036437496E-5 30 7.693728072874992E-5 0.0 0.0 0.3051332553702222 3.846864036437496E-5 31 7.693728072874992E-5 0.0 0.0 0.4524681479657783 3.846864036437496E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6875 0.0 29.330908 1 GTATTGG 1025 0.0 19.131706 1 ATTGGAC 1010 0.0 18.866337 3 TTGGACC 1445 0.0 17.539791 4 GTATCAA 11600 0.0 17.447412 2 TGGACCC 1520 0.0 16.30921 5 GGACCCT 1570 0.0 16.025478 6 CGTATAC 110 1.4531915E-5 15.136364 3 TATTGGA 1295 0.0 15.0 2 TATCGTG 75 0.004106259 14.8 5 CGCGAAT 140 6.002738E-7 14.535715 35 ACTAGAC 185 4.9058144E-9 14.0 3 GACCCTC 1760 0.0 13.875 7 CGATCGT 160 1.7859202E-7 13.875 26 ACGCGAA 120 3.3035092E-5 13.874999 34 GTATACT 270 0.0 13.703704 4 TTGTGCG 150 1.3071985E-6 13.566667 35 CTAGGCA 465 0.0 13.129032 4 TCTACAC 325 0.0 13.092307 3 CGTGCTT 170 3.7363134E-7 13.058824 30 >>END_MODULE