##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088350_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 452343 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.22333715786472 31.0 30.0 31.0 27.0 34.0 2 30.479465803604786 31.0 30.0 31.0 27.0 34.0 3 30.403072447235836 31.0 30.0 33.0 27.0 34.0 4 34.270447425957734 35.0 35.0 37.0 30.0 37.0 5 33.88406806339437 35.0 33.0 37.0 28.0 37.0 6 34.177608584636 35.0 35.0 37.0 30.0 37.0 7 34.00859966883537 35.0 33.0 37.0 30.0 37.0 8 34.182189179450106 35.0 35.0 37.0 30.0 37.0 9 35.499119031354525 37.0 35.0 39.0 30.0 39.0 10 35.190945808822065 37.0 34.0 39.0 29.0 39.0 11 35.42126439449709 37.0 34.0 39.0 30.0 39.0 12 35.101270496061616 37.0 34.0 39.0 29.0 39.0 13 35.27374580793778 37.0 34.0 39.0 30.0 39.0 14 35.876036547487196 38.0 34.0 40.0 27.0 41.0 15 36.033364062227115 38.0 34.0 40.0 29.0 41.0 16 35.89396763075808 38.0 34.0 40.0 28.0 41.0 17 36.055659090557384 38.0 34.0 40.0 29.0 41.0 18 36.080682137227726 38.0 34.0 40.0 29.0 41.0 19 36.198997221135286 38.0 34.0 40.0 29.0 41.0 20 36.18335643527146 38.0 34.0 40.0 29.0 41.0 21 36.08018251636479 38.0 34.0 40.0 29.0 41.0 22 35.98079996816575 38.0 34.0 40.0 29.0 41.0 23 35.81822422365329 38.0 34.0 40.0 28.0 41.0 24 35.73695624780311 38.0 34.0 40.0 27.0 41.0 25 35.59578019334885 38.0 34.0 40.0 27.0 41.0 26 35.230800520843694 37.0 33.0 40.0 27.0 41.0 27 35.041338099627936 37.0 33.0 40.0 27.0 41.0 28 34.82848855846117 37.0 33.0 40.0 26.0 41.0 29 34.63862820912449 37.0 33.0 40.0 25.0 41.0 30 34.37357491991697 37.0 33.0 39.0 25.0 40.0 31 34.05937087564083 36.0 32.0 39.0 24.0 40.0 32 33.907727100894675 36.0 32.0 39.0 24.0 40.0 33 33.66601008526715 36.0 32.0 39.0 24.0 40.0 34 33.744081371879304 36.0 32.0 39.0 24.0 40.0 35 33.666151570821256 36.0 32.0 39.0 23.0 40.0 36 33.54954978854542 36.0 32.0 39.0 23.0 40.0 37 33.383832622589495 36.0 31.0 39.0 21.0 40.0 38 33.24995633844229 36.0 31.0 39.0 21.0 40.0 39 33.04027253654859 36.0 31.0 39.0 19.0 40.0 40 32.802189931092116 36.0 31.0 39.0 18.0 40.0 41 32.63471967069237 36.0 31.0 39.0 16.0 40.0 42 32.411267555814945 36.0 30.0 39.0 15.0 40.0 43 31.998271223385792 35.0 30.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 5.0 15 7.0 16 18.0 17 51.0 18 139.0 19 264.0 20 539.0 21 966.0 22 1600.0 23 2597.0 24 3992.0 25 5795.0 26 8003.0 27 10764.0 28 13954.0 29 17832.0 30 21604.0 31 25241.0 32 29580.0 33 34541.0 34 39341.0 35 45598.0 36 53886.0 37 59256.0 38 53338.0 39 23430.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.14917883110825 25.292974579025206 14.908598121337127 19.64924846852941 2 23.211368364272246 25.985590580599236 30.884085749088637 19.918955306039884 3 25.2063146771366 25.47137901990304 31.078186243624863 18.244120059335504 4 19.17925114349067 18.58655931450249 32.378969056667174 29.855220485339668 5 11.946465403465954 41.330583207875435 33.79139281474456 12.931558573914042 6 32.060405488755215 36.823162953776226 12.98527887023785 18.13115268723071 7 23.66390106622629 35.279643986974484 22.03858576345826 19.01786918334096 8 26.856832094229375 36.04875061623591 18.94823176218047 18.14618552735424 9 24.121739476459236 14.564832439100417 23.28564828017677 38.02777980426358 10 17.093665647528535 28.847356983527987 32.93231021592022 21.12666715302326 11 32.22731422836211 22.501066668435236 23.99418140658748 21.277437696615177 12 19.329800615904304 28.583176925474696 32.63121127109295 19.45581118752805 13 31.9859045016724 21.15474319266574 28.51309736195763 18.346254943704224 14 19.32184205348596 24.02004673444709 29.76391808870702 26.894193123359926 15 21.862170963185015 29.802605544907294 28.01259221431524 20.322631277592446 16 19.9430520644732 29.08832456786111 29.89545543978795 21.07316792787774 17 19.97687595475115 27.48821137941783 29.53776227331914 22.997150392511877 18 21.17839780874248 25.55140678644303 32.081849393049076 21.188346011765407 19 21.206031706028387 24.586431093219083 34.33080648976551 19.87673071098702 20 21.90793269709048 24.09145272503388 35.065204944035834 18.935409633839807 21 20.98142338888852 24.910521440588226 35.411181338055414 18.69687383246784 22 19.15758616801852 24.89570967164298 35.01303214596003 20.93367201437847 23 20.413933674225092 25.36813877964288 36.16680262544131 18.051124920690715 24 20.56558850253016 25.347800231240452 33.48719887342128 20.599412392808112 25 20.248351361687924 26.669142663863482 33.844670968711796 19.237835005736798 26 20.435598649697244 26.59663131738526 33.94945870721997 19.018311325697535 27 19.249330707007736 26.74563329155088 33.79050853003142 20.214527471409973 28 19.5053311314644 26.575850626626256 34.23729338134999 19.681524860559353 29 19.599507453414777 25.402846954633983 33.877389503098314 21.12025608885293 30 20.0854219032902 26.166868946794796 34.8728730189259 18.874836130989095 31 20.940746292083663 26.001065563079344 34.219828758265294 18.838359386571696 32 20.9661694775867 25.947566337933825 33.19538491808208 19.890879266397402 33 20.41658652836454 26.353895163625836 33.363399013580405 19.866119294429225 34 19.231645012744753 26.823008203951424 34.52424377076687 19.421103012536946 35 18.947789619823897 28.48855846116774 33.303488724264554 19.26016319474381 36 21.53122740928897 25.750591918079863 33.06937434645833 19.64880632617284 37 20.44068328679785 26.87916028323639 32.8544931611631 19.825663268802657 38 20.67236588164291 25.131150476518926 33.71622861412689 20.480255027711273 39 19.85771858965431 25.292311365490345 34.33080648976551 20.519163555089833 40 18.41058665658582 26.030689100969838 33.25043164147561 22.308292600968734 41 20.75040400757832 25.032331659824514 33.06318435346628 21.15407997913088 42 19.46376974994639 27.313565148570884 31.749137269726734 21.47352783175599 43 20.150858972063233 27.114822159290625 30.721156290690914 22.013162577955224 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 34.0 1 46.5 2 59.0 3 142.0 4 225.0 5 225.0 6 514.0 7 803.0 8 940.5 9 1078.0 10 1735.5 11 2393.0 12 2393.0 13 4979.0 14 7565.0 15 11827.5 16 16090.0 17 14814.0 18 13538.0 19 13538.0 20 15657.0 21 17776.0 22 13804.0 23 9832.0 24 10059.0 25 10286.0 26 10286.0 27 10820.0 28 11354.0 29 11796.5 30 12239.0 31 13228.5 32 14218.0 33 14218.0 34 15442.5 35 16667.0 36 18006.0 37 19345.0 38 20523.0 39 21701.0 40 21701.0 41 22822.5 42 23944.0 43 24825.5 44 25707.0 45 27735.5 46 29764.0 47 29764.0 48 40923.5 49 52083.0 50 46228.0 51 40373.0 52 35592.5 53 30812.0 54 30812.0 55 26304.0 56 21796.0 57 18424.5 58 15053.0 59 13128.0 60 11203.0 61 11203.0 62 9818.5 63 8434.0 64 7228.5 65 6023.0 66 5152.0 67 4281.0 68 4281.0 69 3614.5 70 2948.0 71 2417.5 72 1887.0 73 1571.0 74 1255.0 75 1255.0 76 1006.0 77 757.0 78 574.0 79 391.0 80 303.5 81 216.0 82 216.0 83 164.5 84 113.0 85 84.0 86 55.0 87 38.5 88 22.0 89 22.0 90 19.0 91 16.0 92 10.5 93 5.0 94 3.5 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 452343.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.39930112889087 #Duplication Level Percentage of deduplicated Percentage of total 1 87.34759233013926 52.7573353203168 2 7.309122293416364 8.829317567758888 3 2.004994291612684 3.633007619424653 4 0.9031735647015353 2.1820420842424735 5 0.5258498786570647 1.5880482584799387 6 0.34883143577152387 1.2641504959432577 7 0.23887778022859216 1.0099635686719428 8 0.1841759567497252 0.8899279257942587 9 0.14293460950250855 0.7769835468974197 >10 0.8894729880132117 9.874744210084682 >50 0.05799311067216221 2.498697490567648 >100 0.03743859042658905 4.847974156310056 >500 0.005505675062733684 2.239538820516014 >1k 0.00330340503764021 4.147647178086923 >5k 7.340900083644911E-4 3.4606217569050655 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8762 1.9370256641530872 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6848 1.5138954289112467 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4895 1.0821434177162021 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2955 0.6532653318388921 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2378 0.5257072619671356 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1941 0.42909915705559726 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1873 0.41406631693206264 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1249 0.2761179016808042 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1193 0.2637379156967169 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1158 0.2560004244566623 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1067 0.23588294723252043 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 951 0.2102386905511968 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 899 0.19874298928025855 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 775 0.1713301631726367 No Hit TTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCC 763 0.16867730903318942 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 727 0.16071874661484759 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 717 0.15850803483197484 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 646 0.14281198117357846 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 637 0.14082234056899298 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 634 0.1401591270341312 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 607 0.1341902052203748 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 594 0.13131627990264025 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 592 0.13087413754606572 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 553 0.12225236159286205 No Hit GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 505 0.11164094503507294 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 502 0.11097773150021112 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 488 0.1078827350041893 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 4.421423565745463E-4 0.0 0.0 0.0 0.0 6 4.421423565745463E-4 0.0 0.0 0.0 0.0 7 4.421423565745463E-4 0.0 0.0 0.0 0.0 8 4.421423565745463E-4 0.0 0.0 0.0 0.0 9 4.421423565745463E-4 0.0 0.0 0.0 0.0 10 4.421423565745463E-4 0.0 0.0 4.421423565745463E-4 0.0 11 4.421423565745463E-4 0.0 0.0 4.421423565745463E-4 0.0 12 4.421423565745463E-4 0.0 0.0 4.421423565745463E-4 0.0 13 4.421423565745463E-4 0.0 0.0 4.421423565745463E-4 0.0 14 4.421423565745463E-4 0.0 0.0 8.842847131490926E-4 0.0 15 4.421423565745463E-4 0.0 0.0 0.0011053558914363658 0.0 16 4.421423565745463E-4 0.0 0.0 0.0019896406045854585 0.0 17 4.421423565745463E-4 0.0 0.0 0.002652854139447278 0.0 18 4.421423565745463E-4 0.0 0.0 0.002652854139447278 0.0 19 4.421423565745463E-4 0.0 0.0 0.0033160676743090975 0.0 20 4.421423565745463E-4 0.0 0.0 0.005968921813756375 0.0 21 4.421423565745463E-4 0.0 0.0 0.01260105716237457 0.0 22 4.421423565745463E-4 0.0 0.0 0.021443904293865494 0.0 23 4.421423565745463E-4 0.0 0.0 0.024981043146461865 0.0 24 4.421423565745463E-4 0.0 0.0 0.032718534386516424 0.0 25 4.421423565745463E-4 0.0 0.0 0.0386874562002728 0.0 26 4.421423565745463E-4 0.0 0.0 0.046867089796901906 0.0 27 4.421423565745463E-4 0.0 0.0 0.10235595554700747 0.0 28 4.421423565745463E-4 0.0 0.0 0.17000373610291306 0.0 29 4.421423565745463E-4 0.0 0.0 0.2535686414955023 0.0 30 4.421423565745463E-4 0.0 0.0 0.39726490738222986 0.0 31 4.421423565745463E-4 0.0 0.0 0.6030821743676812 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2005 0.0 29.802992 1 CCGGAGG 50 2.698592E-4 22.2 32 TACACTT 50 2.698592E-4 22.2 5 GTGTTAA 45 0.0038222747 20.555555 1 CTATAGT 45 0.0038222747 20.555555 4 ATACTTA 45 0.0038222747 20.555555 6 AGTGCGC 45 0.0038222747 20.555555 8 GTATCAA 2960 0.0 20.1875 2 CCATACA 55 5.1364687E-4 20.181818 2 CTTACCA 65 6.890307E-5 19.923077 9 CGAACTA 60 9.225011E-4 18.5 24 CCTGTGC 50 0.007028447 18.5 8 ACTTACC 60 9.225011E-4 18.5 8 GTGTACT 50 0.007028447 18.5 4 ACTTTAC 50 0.007028447 18.5 8 TACACCG 50 0.007028447 18.5 5 CATACAC 75 2.0637753E-4 17.266666 3 GATACCC 155 3.9835868E-10 16.709679 36 TATTCTC 90 4.436372E-5 16.444445 5 TAGAGTC 80 3.376895E-4 16.1875 5 >>END_MODULE