##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088348_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 466076 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.20139204764888 31.0 30.0 31.0 27.0 34.0 2 30.440250087968487 31.0 30.0 31.0 27.0 34.0 3 30.35689458371596 31.0 30.0 31.0 27.0 34.0 4 34.24583973429226 35.0 35.0 37.0 30.0 37.0 5 33.85973746770913 35.0 33.0 37.0 28.0 37.0 6 34.15479878818047 35.0 33.0 37.0 30.0 37.0 7 33.97427672740068 35.0 33.0 37.0 30.0 37.0 8 34.1224113663866 35.0 33.0 37.0 30.0 37.0 9 35.45995502879359 37.0 35.0 39.0 30.0 39.0 10 35.130429372033745 37.0 34.0 39.0 29.0 39.0 11 35.3775800513221 37.0 34.0 39.0 30.0 39.0 12 35.04385336297084 37.0 34.0 39.0 29.0 39.0 13 35.218803371124025 37.0 34.0 39.0 29.0 39.0 14 35.827485217003236 38.0 34.0 40.0 27.0 41.0 15 35.97115921008591 38.0 34.0 40.0 29.0 41.0 16 35.84615384615385 38.0 34.0 40.0 27.0 41.0 17 35.99187900685725 38.0 34.0 40.0 29.0 41.0 18 36.01247650597757 38.0 34.0 40.0 29.0 41.0 19 36.13324007243454 38.0 34.0 40.0 29.0 41.0 20 36.10050077669736 38.0 34.0 40.0 29.0 41.0 21 36.014710047288425 38.0 34.0 40.0 29.0 41.0 22 35.91928569589509 38.0 34.0 40.0 29.0 41.0 23 35.7520146928827 38.0 34.0 40.0 27.0 41.0 24 35.675565787553964 38.0 34.0 40.0 27.0 41.0 25 35.52841811206756 38.0 34.0 40.0 27.0 41.0 26 35.18309031145135 37.0 33.0 40.0 27.0 41.0 27 34.97190157828337 37.0 33.0 40.0 27.0 41.0 28 34.774796385138906 37.0 33.0 40.0 26.0 41.0 29 34.57803448364644 37.0 33.0 39.0 25.0 41.0 30 34.320353332932825 37.0 33.0 39.0 25.0 40.0 31 34.050390923368724 36.0 32.0 39.0 24.0 40.0 32 33.89784713222736 36.0 32.0 39.0 24.0 40.0 33 33.6765034028785 36.0 32.0 39.0 24.0 40.0 34 33.79976441610381 36.0 32.0 39.0 24.0 40.0 35 33.713239900788714 36.0 32.0 39.0 24.0 40.0 36 33.59224890361229 36.0 32.0 39.0 23.0 40.0 37 33.433540881744605 36.0 31.0 39.0 22.0 40.0 38 33.33467074039427 36.0 31.0 39.0 21.0 40.0 39 33.16231687535938 36.0 31.0 39.0 20.0 40.0 40 32.9544280331963 36.0 31.0 39.0 18.0 40.0 41 32.77362919352208 36.0 31.0 39.0 18.0 40.0 42 32.57842068675495 36.0 30.0 39.0 16.0 40.0 43 32.17075112213459 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 6.0 15 10.0 16 23.0 17 66.0 18 139.0 19 324.0 20 523.0 21 1018.0 22 1689.0 23 2688.0 24 4089.0 25 5857.0 26 8217.0 27 11202.0 28 14650.0 29 18286.0 30 22395.0 31 26172.0 32 30559.0 33 35363.0 34 41000.0 35 46882.0 36 55201.0 37 61072.0 38 55255.0 39 23389.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.541619821659985 25.525879899415543 14.968159699276512 19.964340579647953 2 23.291265802143858 25.96228941202722 30.843467588976903 19.902977196852014 3 24.81891365356723 25.491550734215018 31.331585406671874 18.357950205545876 4 19.052686686291505 19.107613350612347 32.53374986053777 29.30595010255838 5 11.978947639440777 41.21430839605558 33.95669375809954 12.850050206404106 6 31.61372823316369 37.61189162282546 13.260498287832887 17.513881856177964 7 23.915842051510914 35.35067242252337 22.124717857173508 18.608767668792215 8 26.7516456543568 35.99198413992568 19.170264077103305 18.08610612861422 9 24.330366721307254 14.354954985882133 23.00268625717694 38.31199203563367 10 16.661874887357428 29.04633579072941 33.35335867970031 20.938430642212857 11 32.45608012427158 22.61197744573846 23.94909843029892 20.982843999691035 12 19.485663282383133 28.727718226212033 32.345797681064894 19.440820810339947 13 31.718432187025293 21.323990078871258 28.08125713402964 18.876320600073807 14 19.419365082089616 24.03749603069027 29.767677374505446 26.775461512714667 15 22.164840069001624 29.84878002729169 27.649353324350535 20.337026579356156 16 20.06475338785949 29.116496022107984 29.573932148404978 21.244818441627547 17 20.267080905260087 27.796325062865286 29.40786481174744 22.52872922012719 18 21.273569117482985 25.59947304731417 31.863043795432507 21.263914039770338 19 21.39479398209734 24.67451660244252 34.17232382701534 19.758365588444804 20 21.993837914846505 24.347960418472525 34.47871162643003 19.179490040250947 21 21.066735897149822 25.26905483225912 34.836164059080495 18.82804521151057 22 19.386537817866614 25.43619495532917 34.4636926166548 20.71357461014942 23 20.691689767334083 25.573511616131274 35.285447008642365 18.449351607892275 24 20.631613728233162 25.553343231575965 33.110479835906595 20.70456320428428 25 20.57132313184974 26.52807696598838 33.54946403590831 19.35113586625357 26 20.195204215621487 26.84583630137574 33.41536573434375 19.543593748659017 27 19.525141822363736 26.82952994790549 33.23857053356105 20.406757696169723 28 19.73133137084939 26.78533114770982 33.59044447686643 19.89289300457436 29 19.852985350028753 25.754168847999036 33.24758193942619 21.145263862546024 30 20.255065697439903 26.57013019335902 34.27767145272445 18.897132656476625 31 21.104068864305393 26.449119886027173 33.364730215672985 19.082081033994456 32 20.75305315013002 26.290562054257244 32.923385885563725 20.032998910049006 33 20.480350844068347 26.551034595216233 33.051262025935685 19.917352534779738 34 19.485448725100625 26.95290038534488 34.0521717488135 19.509479140740996 35 19.1767007955784 28.41360636462723 32.94055046816399 19.469142371630376 36 21.514731503016677 26.199160651910848 32.44320668732138 19.842901157751097 37 20.63933779040328 27.16488298045812 32.225216488298045 19.97056274084055 38 20.525193316111533 25.64431551935736 33.27525982886911 20.555231335661993 39 19.823161887760797 25.682506715642944 33.91163672877385 20.582694667822416 40 18.8104515143453 26.03051862786327 32.93969223903398 22.219337618757457 41 20.582050995974903 25.368394854058135 32.82640599387224 21.223148156094716 42 19.627700203400302 27.348973128845937 31.568242089272996 21.45508457848076 43 20.310206919043246 27.037435954651173 30.644787545378865 22.007569580926717 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 70.0 1 71.0 2 72.0 3 146.0 4 220.0 5 220.0 6 458.5 7 697.0 8 829.5 9 962.0 10 1588.0 11 2214.0 12 2214.0 13 4604.0 14 6994.0 15 11141.5 16 15289.0 17 14159.5 18 13030.0 19 13030.0 20 15191.0 21 17352.0 22 13804.5 23 10257.0 24 10690.5 25 11124.0 26 11124.0 27 11818.0 28 12512.0 29 13172.5 30 13833.0 31 14865.0 32 15897.0 33 15897.0 34 17339.0 35 18781.0 36 20260.0 37 21739.0 38 22774.0 39 23809.0 40 23809.0 41 24566.0 42 25323.0 43 26030.0 44 26737.0 45 28549.0 46 30361.0 47 30361.0 48 40151.5 49 49942.0 50 44940.5 51 39939.0 52 34904.0 53 29869.0 54 29869.0 55 25930.5 56 21992.0 57 18641.5 58 15291.0 59 13669.0 60 12047.0 61 12047.0 62 10629.0 63 9211.0 64 8122.5 65 7034.0 66 5872.5 67 4711.0 68 4711.0 69 3953.0 70 3195.0 71 2668.5 72 2142.0 73 1781.5 74 1421.0 75 1421.0 76 1194.0 77 967.0 78 746.5 79 526.0 80 404.5 81 283.0 82 283.0 83 202.5 84 122.0 85 90.0 86 58.0 87 43.5 88 29.0 89 29.0 90 24.0 91 19.0 92 11.5 93 4.0 94 2.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 466076.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.58255409855117 #Duplication Level Percentage of deduplicated Percentage of total 1 86.55264881504216 53.30133178025235 2 7.990485610950706 9.841490248201328 3 2.1682050551192957 4.005708153109085 4 0.9370587394060446 2.308258820519716 5 0.5303053905995168 1.632878020267402 6 0.3451015486786532 1.2751340874598167 7 0.24482366034474473 1.0553806415449891 8 0.17999404363018628 0.886759434341834 9 0.1257795913749648 0.6971245641308186 >10 0.8275935080197302 9.444090163208337 >50 0.05371039744172479 2.2914957560217957 >100 0.03627195666766744 4.698113986151964 >500 0.004882763397570616 2.0260267546571944 >1k 0.002441381698785308 3.3052608637145737 >5k 6.975376282243738E-4 3.230946726418762 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8265 1.7733159398896317 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6778 1.4542692608072503 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4725 1.013783159828011 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2667 0.5722242724362551 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2094 0.449282949561874 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1896 0.40680060762622405 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1720 0.3690385259056463 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1221 0.2619744419365082 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1066 0.22871806314849938 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 953 0.20447309022562843 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 945 0.20275663196560217 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 872 0.18709395034286255 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 849 0.18215913284528704 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 688 0.14761541036225853 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 645 0.13838944721461735 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 625 0.13409830156455171 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 576 0.12358499472189086 No Hit TTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCC 569 0.12208309374436786 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 562 0.1205811927668449 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 561 0.12036663548434161 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 559 0.11993752091933504 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 522 0.11199890146671358 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 507 0.10878054222916433 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 495 0.10620585483912495 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 488 0.10470395386160197 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 481 0.10320205288407899 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 2.1455728250328272E-4 0.0 16 0.0 0.0 0.0 4.2911456500656543E-4 0.0 17 0.0 0.0 0.0 4.2911456500656543E-4 0.0 18 0.0 0.0 0.0 6.436718475098482E-4 0.0 19 0.0 0.0 0.0 0.0010727864125164137 0.0 20 0.0 0.0 0.0 0.001501900977522979 0.0 21 2.1455728250328272E-4 0.0 0.0 0.0034329165200525234 0.0 22 2.1455728250328272E-4 0.0 0.0 0.006651275757601764 0.0 23 2.1455728250328272E-4 0.0 0.0 0.009011405865137875 0.0 24 2.1455728250328272E-4 0.0 0.0 0.014589895210223225 0.0 25 2.1455728250328272E-4 0.0 0.0 0.01823736901277903 0.0 26 2.1455728250328272E-4 0.0 0.0 0.02445953020537423 0.0 27 2.1455728250328272E-4 0.0 0.0 0.07874252267870475 0.0 28 2.1455728250328272E-4 0.0 0.0 0.13924767634463048 0.0 29 2.1455728250328272E-4 0.0 0.0 0.204902204790635 0.0 30 2.1455728250328272E-4 0.0 0.0 0.3239814965799569 0.0 31 2.1455728250328272E-4 0.0 0.0 0.48039375552485003 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1790 0.0 31.6257 1 CTGCTCG 25 0.005493032 29.6 9 GTGTAAC 35 8.861452E-4 26.42857 1 CACTATA 45 1.3215638E-4 24.666666 2 GTAGTGT 55 1.8995139E-5 23.545454 6 GTATCAA 2655 0.0 21.391714 2 CTAGACT 70 1.2172246E-4 18.5 4 TAGACTG 50 0.0070287604 18.5 5 CTAACAC 70 1.2172246E-4 18.5 3 AACTGGT 60 9.22559E-4 18.5 7 GACTAGT 50 0.0070287604 18.5 15 CATACAG 95 3.597088E-6 17.526316 5 GTGGTAT 205 0.0 17.146343 1 GTGTTAG 65 0.0015780289 17.076923 1 CTGTGCC 65 0.0015780289 17.076923 9 ACAGTGT 90 4.4368382E-5 16.444445 8 ATACTGG 90 4.4368382E-5 16.444445 6 ACACCAT 80 3.3771695E-4 16.1875 6 AACAGCG 70 0.0025893939 15.857142 7 TTGGACC 165 9.677024E-10 15.69697 4 >>END_MODULE