##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088347_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 551832 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.02726192029458 31.0 31.0 33.0 30.0 34.0 2 31.36890575392511 31.0 31.0 34.0 30.0 34.0 3 31.471438771220228 31.0 31.0 34.0 30.0 34.0 4 35.34411197610867 37.0 35.0 37.0 33.0 37.0 5 35.07878665970803 35.0 35.0 37.0 32.0 37.0 6 35.11305614752316 37.0 35.0 37.0 32.0 37.0 7 34.9483719682802 36.0 35.0 37.0 32.0 37.0 8 34.98334094434538 36.0 35.0 37.0 32.0 37.0 9 36.522050189188015 38.0 35.0 39.0 32.0 39.0 10 36.288741863465695 38.0 35.0 39.0 32.0 39.0 11 36.40181613244611 38.0 35.0 39.0 32.0 39.0 12 36.17267755403819 38.0 35.0 39.0 31.0 39.0 13 36.252138331956104 38.0 35.0 39.0 32.0 39.0 14 37.12655663317821 39.0 36.0 41.0 31.0 41.0 15 37.26663006132301 39.0 36.0 41.0 32.0 41.0 16 37.25826519665405 39.0 36.0 41.0 32.0 41.0 17 37.27140506530973 39.0 36.0 41.0 32.0 41.0 18 37.26757056495455 39.0 36.0 40.0 32.0 41.0 19 37.32774286377013 39.0 36.0 41.0 31.0 41.0 20 37.305411791994665 39.0 36.0 40.0 31.0 41.0 21 37.23091629336465 39.0 36.0 40.0 31.0 41.0 22 37.146299960857654 39.0 36.0 40.0 31.0 41.0 23 37.03783216631149 39.0 36.0 40.0 31.0 41.0 24 36.95945867582888 39.0 36.0 40.0 31.0 41.0 25 36.83739072761275 39.0 35.0 40.0 30.0 41.0 26 36.622935966018645 38.0 35.0 40.0 30.0 41.0 27 36.49291994665043 38.0 35.0 40.0 30.0 41.0 28 36.378319850969135 38.0 35.0 40.0 30.0 41.0 29 36.17124958320648 38.0 35.0 40.0 30.0 41.0 30 36.00681366792792 38.0 34.0 40.0 29.0 41.0 31 35.8558202496412 38.0 34.0 40.0 29.0 41.0 32 35.715339088708156 38.0 34.0 40.0 28.0 41.0 33 35.5551870859247 38.0 34.0 40.0 27.0 41.0 34 35.77431718349063 38.0 34.0 40.0 29.0 41.0 35 35.74949803563403 38.0 34.0 40.0 28.0 41.0 36 35.71994375099668 38.0 34.0 40.0 28.0 41.0 37 35.64387530987692 38.0 34.0 40.0 27.0 41.0 38 35.65496926600849 38.0 34.0 40.0 27.0 41.0 39 35.59260970730222 38.0 34.0 40.0 27.0 41.0 40 35.458208295278276 38.0 34.0 40.0 26.0 41.0 41 35.40710216152742 38.0 34.0 40.0 26.0 41.0 42 35.33298540135404 38.0 34.0 40.0 26.0 41.0 43 34.976027124197216 38.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 2.0 16 6.0 17 11.0 18 31.0 19 78.0 20 175.0 21 313.0 22 691.0 23 1173.0 24 1920.0 25 3050.0 26 4643.0 27 6861.0 28 9561.0 29 13188.0 30 17028.0 31 21377.0 32 26484.0 33 32565.0 34 39360.0 35 47975.0 36 59327.0 37 74683.0 38 96112.0 39 95217.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.71335478913872 22.695856710013192 13.631141361863754 23.959647138984327 2 18.213151828817466 23.457682773017872 35.47220893315357 22.85695646501109 3 19.11306339610606 25.405376998796736 32.378513750561766 23.103045854535438 4 13.826490671073804 16.932870873744182 37.2867104481074 31.953928007074616 5 12.86732193856101 38.191877237999975 35.568615085750736 13.372185737688284 6 31.49454906565766 38.29227011119326 15.198466199857927 15.014714623291148 7 25.165811333884225 33.186911958712074 23.250010872874352 18.39726583452935 8 25.25823076588527 35.327599704257814 20.481052204294063 18.933117325562854 9 24.734339436640138 14.661164992244016 22.38634222009597 38.21815335101987 10 15.345431218196842 27.886566926165933 35.42581800258049 21.342183853056728 11 32.708324272604706 23.339168442569477 24.06674495136201 19.88576233346381 12 20.06154046883834 27.137244668667275 32.01372881601647 20.787486046477913 13 29.740935647080995 21.97806578813842 26.659563055422662 21.62143550935792 14 20.18494759274562 23.194377999101174 28.406652749387497 28.21402165876571 15 22.46643906116354 30.03704025862944 25.48964177503298 22.006878905174037 16 21.87785412951768 28.816197683352907 26.82175009785587 22.484198089273548 17 21.002044100378374 27.829665550384902 27.982973078763102 23.185317270473625 18 21.86969947375288 27.11586134910625 29.646522854781892 21.36791632235898 19 22.018476637817308 26.4779860537265 30.64247814552255 20.861059162933646 20 22.567375578074486 26.30546978065788 30.25649110598878 20.87066353527885 21 21.82330854317981 26.928304266515894 30.264464547181024 20.98392264312327 22 21.49204830455646 27.202481914785658 29.962198640165848 21.343271140492035 23 21.805549515069803 27.0653024833645 30.244712158772955 20.884435842792733 24 21.63140231084823 27.191427825860043 29.452442047579698 21.72472781571203 25 21.889089433015847 27.26699430261384 29.813783905246527 21.03013235912379 26 21.455986604618797 27.758629437944883 29.5039069861842 21.28147697125212 27 21.03303179228461 27.781824903231417 29.517316864552978 21.66782643993099 28 21.28800069586396 27.705714782759973 29.49176560982328 21.51451891155279 29 21.13831745893678 27.46596790327491 29.48034909175256 21.91536554603575 30 21.400716159990722 27.857572594557762 30.075820177155364 20.665891068296148 31 22.01249655692312 27.36213195320315 29.84839588860378 20.77697560126995 32 21.324787254091827 27.6511691964221 29.547398483596453 21.476645065889617 33 21.264805230577423 27.360501022050187 29.918888357326146 21.455805390046244 34 20.995882804911638 27.427731628466635 30.382616448484324 21.193769118137403 35 20.83623276649415 28.34141550326911 29.74872787370069 21.07362385653605 36 21.85067194363502 27.384602560199482 29.480167877180012 21.284557618985488 37 21.37317154496296 27.323895678394873 29.6146290900129 21.688303686629265 38 21.153358268458515 26.946969367488656 30.245799446208267 21.65387291784456 39 20.765196654054133 26.553008886762637 30.895272474231287 21.786521984951943 40 20.182954232447557 26.660650342857974 30.96159700778498 22.194798416909496 41 20.909624668377333 26.0620986097218 30.988054335377434 22.040222386523432 42 19.868184519926356 27.3623131677757 30.50783571811711 22.261666594180838 43 20.291320546833095 26.890792849997823 30.25286681453776 22.56501978863132 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 66.0 1 86.5 2 107.0 3 241.5 4 376.0 5 376.0 6 616.5 7 857.0 8 922.5 9 988.0 10 1485.0 11 1982.0 12 1982.0 13 3316.5 14 4651.0 15 7019.0 16 9387.0 17 9381.5 18 9376.0 19 9376.0 20 10669.0 21 11962.0 22 11136.0 23 10310.0 24 11981.5 25 13653.0 26 13653.0 27 15429.5 28 17206.0 29 18294.0 30 19382.0 31 21210.0 32 23038.0 33 23038.0 34 25086.0 35 27134.0 36 28702.5 37 30271.0 38 31386.5 39 32502.0 40 32502.0 41 32980.0 42 33458.0 43 34101.5 44 34745.0 45 35213.0 46 35681.0 47 35681.0 48 40383.0 49 45085.0 50 42135.0 51 39185.0 52 35934.0 53 32683.0 54 32683.0 55 30144.5 56 27606.0 57 25064.5 58 22523.0 59 20844.5 60 19166.0 61 19166.0 62 16886.5 63 14607.0 64 12764.5 65 10922.0 66 9355.5 67 7789.0 68 7789.0 69 6578.0 70 5367.0 71 4653.0 72 3939.0 73 3261.0 74 2583.0 75 2583.0 76 2020.0 77 1457.0 78 1164.0 79 871.0 80 676.5 81 482.0 82 482.0 83 350.0 84 218.0 85 173.5 86 129.0 87 89.0 88 49.0 89 49.0 90 36.5 91 24.0 92 17.5 93 11.0 94 7.5 95 4.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 551832.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.56869466228558 #Duplication Level Percentage of deduplicated Percentage of total 1 84.98228628719953 56.571598675555244 2 9.423292125318596 12.545925124077076 3 2.4409166254406363 4.874659006051627 4 1.0122842026615828 2.695457519937365 5 0.5115760953420376 1.7027476443674199 6 0.30424359026876424 1.2151859198135333 7 0.21522552172095888 1.0029097427281537 8 0.1617562234812404 0.8614320520517696 9 0.12118664781951706 0.726051326025903 >10 0.7437116627184378 9.527411561870167 >50 0.057403701783188286 2.5870671610966074 >100 0.023396762469999718 2.7774065517539954 >500 0.0016323322653483546 0.706485586749514 >1k 0.0010882215102322363 2.2056621279216437 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3774 0.6839037968077241 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 3736 0.6770176430507836 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3177 0.5757186969947375 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1492 0.2703721422461909 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 754 0.13663578770350396 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 737 0.13355513997013582 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 678 0.12286348018962293 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 630 0.11416518070717174 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 588 0.10655416866002697 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 1.8121457255106625E-4 0.0 11 0.0 0.0 0.0 1.8121457255106625E-4 0.0 12 0.0 0.0 0.0 1.8121457255106625E-4 0.0 13 0.0 0.0 0.0 3.624291451021325E-4 0.0 14 0.0 0.0 0.0 3.624291451021325E-4 0.0 15 0.0 0.0 0.0 3.624291451021325E-4 0.0 16 0.0 0.0 0.0 0.0010872874353063976 0.0 17 0.0 0.0 0.0 0.00144971658040853 0.0 18 0.0 0.0 0.0 0.00144971658040853 0.0 19 0.0 0.0 0.0 0.0016309311529595963 0.0 20 0.0 0.0 0.0 0.0021745748706127953 0.0 21 0.0 0.0 0.0 0.004167935168674524 0.0 22 0.0 0.0 0.0 0.006161295466736253 0.0 23 0.0 0.0 0.0 0.008335870337349048 0.0 24 0.0 0.0 0.0 0.012866234651125704 0.0 25 0.0 0.0 0.0 0.017577813537453427 0.0 26 0.0 1.8121457255106625E-4 0.0 0.025913683874802477 0.0 27 0.0 1.8121457255106625E-4 0.0 0.08209020136563303 0.0 28 0.0 1.8121457255106625E-4 0.0 0.14750866205656793 0.0 29 0.0 1.8121457255106625E-4 0.0 0.22851157598689456 0.0 30 0.0 1.8121457255106625E-4 0.0 0.3537308456196814 0.0 31 0.0 1.8121457255106625E-4 0.0 0.5581408834572841 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTGCGAA 35 8.8635273E-4 26.428572 12 GGTATCA 940 0.0 25.388296 1 TTGCGTG 60 1.3353019E-6 24.666666 7 GACCGTC 40 0.0019299214 23.125002 22 GTATACG 40 0.0019299214 23.125002 1 CGAAGAG 40 0.0019299214 23.125002 5 CGTGCGG 50 2.6996364E-4 22.199999 10 TTGGACC 95 7.1249815E-9 21.421053 4 CGACGCT 45 0.0038233243 20.555557 28 AGTGCGA 45 0.0038233243 20.555557 11 TGCGGTC 55 5.138438E-4 20.181818 12 GTGCGGT 55 5.138438E-4 20.181818 11 GCCGTCA 55 5.138438E-4 20.181818 13 GGAGTGT 65 6.8938236E-5 19.923075 6 CGCCGGA 65 6.8938236E-5 19.923075 14 TATACCG 65 6.8938236E-5 19.923075 5 TACCGAC 95 1.6721788E-7 19.473684 7 GGATACA 60 9.2285214E-4 18.5 1 TCGAACT 60 9.2285214E-4 18.5 19 TGCGTGC 70 1.21773985E-4 18.5 8 >>END_MODULE