##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088343_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3145240 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.001099439152497 31.0 31.0 33.0 30.0 34.0 2 31.30829793592858 31.0 31.0 34.0 30.0 34.0 3 31.373818850071853 31.0 31.0 34.0 28.0 34.0 4 35.25059073393445 35.0 35.0 37.0 33.0 37.0 5 35.028138075313805 35.0 35.0 37.0 32.0 37.0 6 35.08663631392199 36.0 35.0 37.0 32.0 37.0 7 34.89033746232402 36.0 35.0 37.0 32.0 37.0 8 34.9640567969376 36.0 35.0 37.0 32.0 37.0 9 36.43650277880225 38.0 35.0 39.0 32.0 39.0 10 36.25578970126286 38.0 35.0 39.0 32.0 39.0 11 36.352570233114164 38.0 35.0 39.0 32.0 39.0 12 36.119110465338096 38.0 35.0 39.0 31.0 39.0 13 36.19112086835981 38.0 35.0 39.0 32.0 39.0 14 36.994063092164666 39.0 36.0 40.0 31.0 41.0 15 37.128559982704026 39.0 36.0 40.0 31.0 41.0 16 37.093367119838234 39.0 36.0 40.0 31.0 41.0 17 37.19265938370363 39.0 36.0 40.0 31.0 41.0 18 37.2058443870738 39.0 36.0 40.0 31.0 41.0 19 37.305525810431 39.0 36.0 40.0 31.0 41.0 20 37.290259248896746 39.0 36.0 40.0 31.0 41.0 21 37.21476739453905 39.0 36.0 40.0 31.0 41.0 22 37.13938046063257 39.0 36.0 40.0 31.0 41.0 23 37.014088591013724 39.0 36.0 40.0 31.0 41.0 24 36.92302908522084 39.0 35.0 40.0 31.0 41.0 25 36.79108048988312 39.0 35.0 40.0 30.0 41.0 26 36.5566761201053 38.0 35.0 40.0 30.0 41.0 27 36.4284099146647 38.0 35.0 40.0 30.0 41.0 28 36.26004692805636 38.0 35.0 40.0 30.0 41.0 29 36.03437893451692 38.0 35.0 40.0 30.0 41.0 30 35.78760476148084 38.0 34.0 40.0 29.0 41.0 31 35.516143442153854 38.0 34.0 40.0 27.0 41.0 32 35.403423268176674 38.0 34.0 40.0 27.0 41.0 33 35.21538229197136 38.0 34.0 40.0 27.0 41.0 34 35.343266968498426 38.0 34.0 40.0 27.0 41.0 35 35.240331421449554 38.0 34.0 40.0 27.0 41.0 36 35.161981279647975 38.0 34.0 40.0 26.0 41.0 37 35.030862509697194 38.0 33.0 40.0 25.0 41.0 38 34.96025358955119 38.0 33.0 40.0 25.0 41.0 39 34.829033078556805 38.0 33.0 40.0 24.0 41.0 40 34.600060408744646 38.0 33.0 40.0 23.0 41.0 41 34.44130527400135 38.0 33.0 40.0 23.0 41.0 42 34.24888021263878 38.0 33.0 40.0 22.0 41.0 43 33.87251910823975 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 0.0 14 1.0 15 16.0 16 30.0 17 108.0 18 236.0 19 583.0 20 1253.0 21 2475.0 22 4541.0 23 7819.0 24 13357.0 25 20545.0 26 31567.0 27 44959.0 28 63069.0 29 84647.0 30 107445.0 31 131720.0 32 159629.0 33 192484.0 34 232460.0 35 276106.0 36 340423.0 37 437224.0 38 513952.0 39 478589.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.81580419936158 22.349391461382915 14.40163548727601 22.4331688519795 2 18.388485457389578 23.725979575485496 36.07324083376785 21.812294133357074 3 19.704474062392695 25.123043074614337 33.96513461611833 21.20734824687464 4 13.114802050082028 16.252146100138624 36.68257430275591 33.95047754702344 5 11.80335999796518 38.656922842136055 35.8099858834302 13.729731276468568 6 31.424915109816737 36.977559741069044 13.34114407803538 18.256381071078838 7 24.249214686319647 34.530719436354616 21.744890691966273 19.475175185359465 8 26.343522274929736 34.26034261296435 19.463315994963818 19.932819117142095 9 23.443425620938307 14.492026045707163 23.670530706718722 38.39401762663581 10 16.045389223079955 27.335561038267347 34.42564001475245 22.193409723900242 11 31.393343592221896 22.323542877491064 25.256482812122442 21.02663071816459 12 21.188494359730896 27.093131207793363 31.671859699100864 20.046514733374877 13 31.85219569889738 21.0523203316758 28.015858885172513 19.0796250842543 14 19.96702954305554 23.465554297923212 28.93531177271051 27.63210438631074 15 21.267947755974106 29.531100965268152 27.52247841182231 21.678472866935433 16 20.85278070989813 28.857161933588532 28.263884473044982 22.026172883468355 17 20.681060904732227 26.476389719067544 27.818258702038634 25.02429067416159 18 22.86858872454884 24.8292022230418 31.650048962877236 20.652160089532117 19 21.71287405730564 23.919764469484043 33.24388599916064 21.123475474049673 20 23.310621764952757 23.28159377344813 33.263026032989536 20.14475842860958 21 22.084705777619515 24.373911052892623 33.92478793351223 19.616595235975634 22 19.851140135569942 24.817851737864203 33.24064300339561 22.09036512317025 23 21.51660922536913 25.229553229642253 34.66702064071423 18.586816904274393 24 21.334365581004946 24.879405069247497 31.56417316325622 22.222056186491333 25 20.956334015846167 25.849410537828593 32.66898551461892 20.525269931706326 26 20.710216072541364 26.645756762599994 32.51519756838906 20.128829596469586 27 18.960651651384314 26.93772176368099 32.21474354898196 21.886883035952742 28 20.223639531482494 26.014040264018007 32.156242448906916 21.60607775559258 29 20.207456346733476 25.90660808078239 31.165952359756332 22.719983212727804 30 20.559766504304918 26.23211583217815 33.551366509391976 19.65675115412496 31 22.035552135926036 25.72086708804416 33.03359997965179 19.20998079637802 32 21.178383843522276 25.9305808141827 31.390418537218146 21.500616805076877 33 20.707418193842123 25.975346873370555 32.2123907873485 21.104844145438822 34 19.477082829927127 27.134081977845888 33.09257799086874 20.29625720135824 35 18.95241698566723 30.074588902595668 31.126845646119218 19.846148465617887 36 22.10346428253488 26.757131411275452 30.953726901603694 20.185677404585977 37 21.057153031247218 28.10748941257265 30.549210871030507 20.28614668514962 38 20.858376467296612 26.00774503694472 32.05132199768539 21.08255649807328 39 20.317463850135443 25.63591331663084 32.97643423077412 21.070188602459588 40 18.506632244280247 26.655708308427972 32.25340514555328 22.5842543017385 41 21.185155981737484 25.442986862687743 32.12797751522936 21.243879640345412 42 19.16963411377192 28.3024188933118 31.35484096603121 21.173106026885073 43 19.777950172323894 28.47652325418728 29.775502028462057 21.97002454502677 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 192.0 1 289.0 2 386.0 3 1259.0 4 2132.0 5 2132.0 6 3632.5 7 5133.0 8 5860.0 9 6587.0 10 10254.0 11 13921.0 12 13921.0 13 26540.5 14 39160.0 15 65284.0 16 91408.0 17 89082.5 18 86757.0 19 86757.0 20 92255.5 21 97754.0 22 78912.0 23 60070.0 24 65002.5 25 69935.0 26 69935.0 27 74056.0 28 78177.0 29 81446.5 30 84716.0 31 90230.5 32 95745.0 33 95745.0 34 105323.0 35 114901.0 36 125672.5 37 136444.0 38 141751.5 39 147059.0 40 147059.0 41 151989.0 42 156919.0 43 163911.0 44 170903.0 45 187884.0 46 204865.0 47 204865.0 48 294969.0 49 385073.0 50 351012.0 51 316951.0 52 281776.5 53 246602.0 54 246602.0 55 207757.5 56 168913.0 57 136505.5 58 104098.0 59 90350.0 60 76602.0 61 76602.0 62 66402.0 63 56202.0 64 48808.5 65 41415.0 66 35485.5 67 29556.0 68 29556.0 69 25360.0 70 21164.0 71 18004.0 72 14844.0 73 12155.0 74 9466.0 75 9466.0 76 7446.5 77 5427.0 78 4131.5 79 2836.0 80 2121.5 81 1407.0 82 1407.0 83 1117.0 84 827.0 85 585.5 86 344.0 87 270.5 88 197.0 89 197.0 90 155.5 91 114.0 92 68.5 93 23.0 94 18.0 95 13.0 96 13.0 97 7.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3145240.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.32518825453584 #Duplication Level Percentage of deduplicated Percentage of total 1 71.9803038804952 26.866783929581807 2 14.082619075375943 10.512728162106491 3 5.385461490791196 6.03040091944004 4 2.7063735681293632 4.040636116701135 5 1.493481942273491 2.787224732505394 6 0.9426410616649258 2.1110553049859324 7 0.6245597845051613 1.6318268073007236 8 0.41085044662321757 1.2268056211737381 9 0.31236833891091437 1.049328634914588 >10 1.7363700142831882 12.145059712340796 >50 0.17594165601881204 4.589804833046567 >100 0.13044033954667983 9.22732264791387 >500 0.009594013616407514 2.465858942293143 >1k 0.007281171048162102 6.122554811384995 >5k 8.566083586073061E-4 2.0578186453439047 >10k+ 8.566083586073061E-4 7.134790178966957 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 46572 1.4807137134209154 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 42829 1.3617084864748001 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 38439 1.2221324922740395 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15334 0.487530363342702 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 14858 0.4723963831058997 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 14733 0.46842212358993274 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 12926 0.410970228027114 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 12787 0.40655085144535874 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 12450 0.39583624779031173 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 12222 0.38858719843318795 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 8254 0.262428304358332 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 7474 0.23762892497869795 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 7293 0.23187419719957778 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 6937 0.22055550609810382 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 6510 0.20697943559156057 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 5971 0.18984242855871095 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5723 0.18195749767903244 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 5583 0.1775063270211494 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 5315 0.1689855146189162 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 5301 0.1685403975531279 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 4927 0.15664941308135466 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 4664 0.14828757105976015 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 4540 0.1443451056199209 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4408 0.14014828757105977 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3979 0.12650862891226108 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 3721 0.11830575727130521 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 3719 0.11824216911904974 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 3670 0.11668425938879066 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3456 0.1098803270974552 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 3443 0.10946700410779464 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 3401 0.10813165291042971 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 3357 0.10673271356080934 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 3299 0.10488865714540067 No Hit CGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAG 3256 0.10352151187190803 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 3242 0.10307639480611973 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 3207 0.10196360214164897 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCCT 3195 0.10158207322811615 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 3173 0.10088260355330596 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 3163 0.10056466279202858 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 6.358815225547175E-5 0.0 11 0.0 0.0 0.0 1.271763045109435E-4 0.0 12 0.0 0.0 0.0 2.8614668514962294E-4 0.0 13 0.0 0.0 0.0 2.8614668514962294E-4 0.0 14 6.358815225547175E-5 0.0 0.0 4.451170657883023E-4 0.0 15 6.358815225547175E-5 0.0 0.0 6.676755986824535E-4 0.0 16 6.358815225547175E-5 0.0 0.0 0.001017410436087548 0.0 17 6.358815225547175E-5 0.0 0.0 0.001589703806386794 0.0 18 6.358815225547175E-5 0.0 0.0 0.002034820872175096 0.0 19 6.358815225547175E-5 0.0 0.0 0.0025753201663466065 0.0 20 6.358815225547175E-5 0.0 0.0 0.00432399435337208 0.0 21 6.358815225547175E-5 0.0 0.0 0.008266459793211329 0.0 22 6.358815225547175E-5 0.0 0.0 0.01389401126782058 0.0 23 6.358815225547175E-5 0.0 0.0 0.017709300403148887 0.0 24 6.358815225547175E-5 0.0 0.0 0.02222405921328738 0.0 25 6.358815225547175E-5 0.0 0.0 0.026516259490531723 0.0 26 6.358815225547175E-5 0.0 0.0 0.03510066004502041 0.0 27 9.538222838320764E-5 0.0 0.0 0.09363355419618216 0.0 28 9.538222838320764E-5 0.0 0.0 0.17000292505500375 0.0 29 9.538222838320764E-5 0.0 0.0 0.2606478360951787 0.0 30 9.538222838320764E-5 0.0 0.0 0.41065228726583664 0.0 31 9.538222838320764E-5 0.0 0.0 0.6023387722399562 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10990 0.0 30.67061 1 GTATTGG 1350 0.0 23.844446 1 ATTGGAC 1450 0.0 21.817242 3 TTGGACC 2340 0.0 19.527777 4 CGTATAC 155 1.8189894E-12 19.096773 3 TGGACCC 2380 0.0 18.266806 5 TCTATAC 255 0.0 18.137255 3 TATTGGA 1725 0.0 18.017393 2 GGACCCT 2475 0.0 17.939394 6 GTATCAA 19025 0.0 17.795006 2 TAGGTCG 205 0.0 17.146341 21 CATTGCG 205 0.0 17.146341 29 GATACCT 1210 0.0 16.971075 36 CTGTGCG 325 0.0 16.507692 9 CCCGTAT 135 2.2233507E-8 16.444445 1 GACCCTC 2610 0.0 16.302683 7 TATACTG 435 0.0 16.160921 5 CGCGATA 140 3.479181E-8 15.857143 14 TATACCG 250 0.0 15.54 5 CCGTATA 155 7.223207E-9 15.516129 2 >>END_MODULE