##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088338_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 465431 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.941245855991543 31.0 31.0 33.0 28.0 34.0 2 31.297648845908416 31.0 31.0 34.0 28.0 34.0 3 31.388962058822898 31.0 31.0 34.0 28.0 34.0 4 35.27443165582009 35.0 35.0 37.0 33.0 37.0 5 34.9980190404163 35.0 35.0 37.0 32.0 37.0 6 35.02044341696191 36.0 35.0 37.0 32.0 37.0 7 34.86365970466084 36.0 35.0 37.0 32.0 37.0 8 34.88829923232445 36.0 35.0 37.0 32.0 37.0 9 36.41384222365936 38.0 35.0 39.0 32.0 39.0 10 36.18289714264843 38.0 35.0 39.0 32.0 39.0 11 36.28025851307713 38.0 35.0 39.0 32.0 39.0 12 36.04674377082747 38.0 35.0 39.0 30.0 39.0 13 36.137339369315754 38.0 35.0 39.0 31.0 39.0 14 37.0087488800703 39.0 36.0 40.0 31.0 41.0 15 37.145226682365376 39.0 36.0 40.0 31.0 41.0 16 37.132565299689965 39.0 36.0 40.0 31.0 41.0 17 37.145314772759015 39.0 36.0 40.0 31.0 41.0 18 37.13299286038102 39.0 36.0 40.0 31.0 41.0 19 37.212927372693265 39.0 36.0 40.0 31.0 41.0 20 37.18277897260818 39.0 36.0 40.0 31.0 41.0 21 37.10885824107118 39.0 36.0 40.0 31.0 41.0 22 37.035672312329865 39.0 36.0 40.0 31.0 41.0 23 36.92462685124111 39.0 36.0 40.0 31.0 41.0 24 36.849636143703364 39.0 35.0 40.0 30.0 41.0 25 36.72189862729384 38.0 35.0 40.0 30.0 41.0 26 36.50637366226143 38.0 35.0 40.0 30.0 41.0 27 36.3709959156137 38.0 35.0 40.0 30.0 41.0 28 36.24285447252117 38.0 35.0 40.0 30.0 41.0 29 36.04795125378413 38.0 34.0 40.0 29.0 41.0 30 35.8686099550739 38.0 34.0 40.0 29.0 41.0 31 35.72541150030832 38.0 34.0 40.0 28.0 41.0 32 35.58035885018402 38.0 34.0 40.0 27.0 41.0 33 35.426754986238564 38.0 34.0 40.0 27.0 41.0 34 35.632065762701664 38.0 34.0 40.0 28.0 41.0 35 35.60341060221601 38.0 34.0 40.0 27.0 41.0 36 35.579039642825684 38.0 34.0 40.0 27.0 41.0 37 35.508829450552284 38.0 34.0 40.0 27.0 41.0 38 35.52072165369303 38.0 34.0 40.0 27.0 41.0 39 35.47112031643788 38.0 34.0 40.0 27.0 41.0 40 35.33399150464838 38.0 34.0 40.0 26.0 41.0 41 35.27445743837433 38.0 34.0 40.0 26.0 41.0 42 35.198267842064666 38.0 34.0 40.0 25.0 41.0 43 34.85260113744035 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 0.0 14 0.0 15 2.0 16 2.0 17 11.0 18 26.0 19 91.0 20 154.0 21 332.0 22 617.0 23 1081.0 24 1785.0 25 2810.0 26 4459.0 27 6052.0 28 8753.0 29 11758.0 30 15246.0 31 18801.0 32 23032.0 33 28066.0 34 33725.0 35 40599.0 36 49745.0 37 62037.0 38 78563.0 39 77683.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.406915310754975 22.993956139578152 13.761438322758906 23.837690226907963 2 18.06712487994998 23.807180871063593 35.577131733812315 22.54856251517411 3 18.936426666895844 25.820583502173257 32.48236580717657 22.76062402375433 4 13.652721885736016 17.32995868345684 37.64166976415409 31.37564966665306 5 12.578663647243093 38.448234002462236 35.88286985611186 13.09023249418281 6 30.980532023006635 38.77373874967503 15.407439556024416 14.83828967129392 7 24.84320984206037 33.51667594122437 23.504665568043386 18.135448648671876 8 24.96137988230264 35.58851902859929 20.78568036937806 18.664420719720002 9 24.5651879655631 14.876104084171446 22.6110852091932 37.94762274107225 10 15.25790074146329 28.197735002610486 35.575198042244715 20.96916621368151 11 32.38954861193174 23.60736607574485 24.233452434410257 19.76963287791316 12 19.75008110761853 27.396756984386517 32.183503032672945 20.669658875322014 13 29.253745453139135 22.353904230702295 27.06695514480127 21.3253951713573 14 20.061620304620877 23.338582947848337 28.609181597272205 27.99061515025858 15 22.11627502250602 30.422984287681743 25.708859100489654 21.751881589322586 16 21.382546499910834 29.337753609020456 27.34648100362889 21.933218887439814 17 20.878927273860143 28.035949474787884 28.408292528860347 22.676830722491626 18 21.423583732067698 27.59893518051011 29.880046666423166 21.097434420999033 19 21.68097956517722 26.775612281949417 30.936057116951815 20.607351035921546 20 22.011640823236956 26.902806216173826 30.346066334214957 20.739486626374266 21 21.330121972966992 27.283743454991182 30.69112285172238 20.695011720319446 22 20.89804933491753 27.47453435632779 30.40901873747129 21.21839757128339 23 21.427880824440145 27.436719943450267 30.54502171105921 20.59037752105038 24 21.287580758479773 27.6315930825407 29.666481175512587 21.414344983466936 25 21.381472226817724 27.803476777438547 30.106933143688323 20.70811785205541 26 21.069933029815374 28.147673876471487 29.947725871289194 20.834667222423946 27 20.65612303434881 28.085580891689638 29.961046857643776 21.29724921631778 28 20.79771222802091 27.928951874713974 29.93633857650221 21.336997320762908 29 20.883439220851212 27.86256179755968 29.78013926876379 21.473859712825316 30 21.11934959209851 28.052708135040426 30.378294527008297 20.44964774585277 31 21.536167552225784 27.816797763793126 30.208989087533922 20.438045596447164 32 21.032548326175093 27.88275813171018 29.786370052703838 21.29832348941089 33 20.90084244495962 27.896723681920626 30.071052422378397 21.131381450741358 34 20.681905588583486 27.78156160633907 30.64428454486272 20.89224826021473 35 20.642802047994223 28.5320487891868 30.005736618317215 20.819412544501763 36 21.53466356989543 27.882543277091553 29.65853155462356 20.92426159838945 37 21.071651866764356 27.65501223597053 29.91764622468207 21.355689672583047 38 20.826502746916297 27.149029609114994 30.571233974531133 21.453233669437573 39 20.591666648762118 26.864132384821808 31.21021161031388 21.333989356102194 40 19.866102601674577 26.91634205714703 31.207848209509038 22.009707131669355 41 20.56309098448535 26.22279134823422 31.293575202339337 21.920542464941096 42 19.550266312299783 27.50611798526527 30.934553134621456 22.00906256781349 43 20.074941290975463 27.123891618736184 30.441891494120505 22.35927559616785 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 53.0 1 76.5 2 100.0 3 251.5 4 403.0 5 403.0 6 582.5 7 762.0 8 819.0 9 876.0 10 1238.0 11 1600.0 12 1600.0 13 2787.0 14 3974.0 15 6149.5 16 8325.0 17 8197.0 18 8069.0 19 8069.0 20 8995.5 21 9922.0 22 9346.0 23 8770.0 24 10297.0 25 11824.0 26 11824.0 27 13210.5 28 14597.0 29 15745.5 30 16894.0 31 18490.0 32 20086.0 33 20086.0 34 21748.5 35 23411.0 36 25182.0 37 26953.0 38 28017.0 39 29081.0 40 29081.0 41 29610.5 42 30140.0 43 30587.0 44 31034.0 45 31043.0 46 31052.0 47 31052.0 48 35100.5 49 39149.0 50 36023.0 51 32897.0 52 29950.0 53 27003.0 54 27003.0 55 24590.5 56 22178.0 57 19815.5 58 17453.0 59 15870.5 60 14288.0 61 14288.0 62 12473.0 63 10658.0 64 9317.0 65 7976.0 66 6751.0 67 5526.0 68 5526.0 69 4708.5 70 3891.0 71 3280.5 72 2670.0 73 2204.5 74 1739.0 75 1739.0 76 1386.0 77 1033.0 78 773.5 79 514.0 80 392.0 81 270.0 82 270.0 83 207.5 84 145.0 85 98.5 86 52.0 87 48.5 88 45.0 89 45.0 90 29.0 91 13.0 92 8.5 93 4.0 94 2.5 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 465431.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.03617699765095 #Duplication Level Percentage of deduplicated Percentage of total 1 85.04270191836424 56.15894916239571 2 9.234043141136638 12.195618145440879 3 2.3795867803592823 4.714164414272278 4 1.0212580096531036 2.6975989874288433 5 0.5405991133882155 1.7849549368238689 6 0.3269655765299617 1.2954934010322925 7 0.23014466897731778 1.0638511866956362 8 0.18345777336674338 0.9691879994912962 9 0.13757897656618362 0.8176670682912158 >10 0.8215029900505039 10.222028252554685 >50 0.053143854967621064 2.3327934522689278 >100 0.026408909301765857 3.0079794279837615 >500 0.0013041436692230051 0.5233983243453242 >1k 0.0013041436692230051 2.2163152409752227 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3262 0.7008557659459727 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 3233 0.6946249820059257 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2573 0.5528209337152017 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1226 0.2634117624309511 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 650 0.139655502104501 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 636 0.13664753744378866 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 607 0.13041675350374168 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 538 0.11559178481880235 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 487 0.10463419926906459 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 2.1485461862230922E-4 0.0 11 0.0 0.0 0.0 2.1485461862230922E-4 0.0 12 0.0 0.0 0.0 2.1485461862230922E-4 0.0 13 0.0 0.0 0.0 2.1485461862230922E-4 0.0 14 0.0 0.0 0.0 2.1485461862230922E-4 0.0 15 0.0 0.0 0.0 2.1485461862230922E-4 0.0 16 0.0 0.0 0.0 2.1485461862230922E-4 0.0 17 0.0 0.0 0.0 4.2970923724461844E-4 0.0 18 0.0 0.0 0.0 4.2970923724461844E-4 0.0 19 0.0 0.0 0.0 8.594184744892369E-4 0.0 20 0.0 0.0 0.0 0.0017188369489784738 0.0 21 0.0 0.0 0.0 0.0036525285165792567 0.0 22 0.0 0.0 0.0 0.0051565108469354215 0.0 23 0.0 0.0 0.0 0.00816447550764775 0.0 24 0.0 0.0 0.0 0.011817004024227007 0.0 25 0.0 0.0 0.0 0.01675866025254012 0.0 26 0.0 0.0 0.0 0.027716245802277887 0.0 27 0.0 0.0 0.0 0.0816447550764775 0.0 28 0.0 0.0 0.0 0.1516873607473503 0.0 29 0.0 0.0 0.0 0.2262419134092916 0.0 30 0.0 0.0 0.0 0.3426931167025832 0.0 31 0.0 0.0 0.0 0.5465901497751546 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAATCGT 25 0.0054930253 29.599998 14 GGTATCA 875 0.0 24.525715 1 GCTCCGT 40 0.0019294699 23.125002 29 GTCTTAT 60 3.720157E-5 21.583332 1 AGCGAAC 45 0.003822439 20.555555 22 ACGGGAT 55 5.1367766E-4 20.181818 5 ATTGGAC 55 5.1367766E-4 20.181818 3 CGAACTA 50 0.0070287473 18.499998 24 TAGTCCC 50 0.0070287473 18.499998 5 GATACCC 125 8.540155E-9 17.76 36 ACGTCTT 65 0.0015780252 17.076921 7 ATAGTAT 145 2.9631337E-9 16.586206 6 TAGGAGT 80 3.3771576E-4 16.1875 4 CTATAGT 70 0.002589386 15.857143 4 GCTTTAG 70 0.002589386 15.857143 1 GTATTGG 95 7.0452545E-5 15.578948 1 TTATGCG 85 5.3556374E-4 15.235294 4 GTTATAT 85 5.3556374E-4 15.235294 1 GTATCAA 1460 0.0 15.20548 1 GGCATAT 75 0.004099527 14.8 1 >>END_MODULE