##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088332_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1013574 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.682222511627174 31.0 30.0 31.0 28.0 34.0 2 30.981877001580546 31.0 31.0 34.0 28.0 34.0 3 31.009367840927254 31.0 31.0 34.0 27.0 34.0 4 34.91566871289121 35.0 35.0 37.0 32.0 37.0 5 34.66607075556397 35.0 35.0 37.0 32.0 37.0 6 34.75036159175354 35.0 35.0 37.0 32.0 37.0 7 34.545560560945724 35.0 35.0 37.0 30.0 37.0 8 34.640825435538005 35.0 35.0 37.0 30.0 37.0 9 36.05124144857702 38.0 35.0 39.0 31.0 39.0 10 35.83080367097025 37.0 35.0 39.0 30.0 39.0 11 35.950226623808426 37.0 35.0 39.0 30.0 39.0 12 35.690413329465834 37.0 35.0 39.0 30.0 39.0 13 35.781751505070176 37.0 35.0 39.0 30.0 39.0 14 36.51438572812641 38.0 35.0 40.0 30.0 41.0 15 36.642198793576 38.0 35.0 40.0 30.0 41.0 16 36.590633737645206 38.0 35.0 40.0 30.0 41.0 17 36.69381909954281 38.0 36.0 40.0 31.0 41.0 18 36.71502426068545 38.0 36.0 40.0 31.0 41.0 19 36.81823823420885 39.0 36.0 40.0 31.0 41.0 20 36.80143235718359 39.0 36.0 40.0 30.0 41.0 21 36.713754496464986 38.0 35.0 40.0 30.0 41.0 22 36.64550787608996 38.0 35.0 40.0 30.0 41.0 23 36.505596039361706 38.0 35.0 40.0 30.0 41.0 24 36.416912825309254 38.0 35.0 40.0 30.0 41.0 25 36.278577587822895 38.0 35.0 40.0 30.0 41.0 26 36.002541501656516 38.0 34.0 40.0 29.0 41.0 27 35.847980512523016 38.0 34.0 40.0 29.0 41.0 28 35.659498961102 38.0 34.0 40.0 27.0 41.0 29 35.43880762529425 38.0 34.0 40.0 27.0 41.0 30 35.20049646103787 37.0 33.0 40.0 27.0 41.0 31 34.91020882540397 37.0 33.0 40.0 26.0 41.0 32 34.7921651502505 37.0 33.0 40.0 26.0 41.0 33 34.592379046818486 37.0 33.0 40.0 25.0 41.0 34 34.725450731767 37.0 33.0 40.0 25.0 41.0 35 34.62272118266649 37.0 33.0 40.0 25.0 41.0 36 34.54900678194192 37.0 33.0 40.0 25.0 41.0 37 34.407651538022876 37.0 33.0 40.0 24.0 41.0 38 34.34771807485196 37.0 33.0 40.0 24.0 41.0 39 34.20297876622723 37.0 33.0 40.0 23.0 41.0 40 33.984519137231224 37.0 33.0 40.0 22.0 41.0 41 33.83845086791887 37.0 33.0 40.0 21.0 41.0 42 33.633371613715425 37.0 32.0 40.0 20.0 41.0 43 33.23355670133606 37.0 31.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 0.0 14 2.0 15 7.0 16 12.0 17 43.0 18 135.0 19 286.0 20 629.0 21 1167.0 22 2159.0 23 3728.0 24 5781.0 25 8819.0 26 13126.0 27 18517.0 28 24847.0 29 32640.0 30 40816.0 31 48359.0 32 57548.0 33 67976.0 34 79819.0 35 93390.0 36 112979.0 37 139341.0 38 157397.0 39 104049.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.773021012772624 23.59393591390466 15.0211035405407 21.611939532782017 2 19.413678724987026 24.727153616805484 34.84826958860429 21.010898069603208 3 20.665585344533305 25.606517136390632 33.38118381095016 20.3467137081259 4 14.335805772444834 17.17417771174083 35.839415770333495 32.650600745480844 5 11.729483984395811 39.59908206011599 35.251792173043114 13.41964178244509 6 31.624232665794505 37.58393565738663 13.240671130080289 17.55116054673857 7 23.986704473477023 35.02201121970374 21.76920481385671 19.222079492962525 8 26.46378064157131 35.02161657658937 19.321233575446882 19.19336920639243 9 23.734626184175994 14.545065283837195 23.352710310248685 38.36759822173813 10 16.1477109712759 27.959379384238346 34.197108449901044 21.695801194584707 11 31.82411940322068 22.620351350764718 24.70584288862974 20.849686357384858 12 20.678707228085962 27.741043081215576 31.83970780623812 19.740541884460335 13 31.84365423738178 21.311418801192612 28.045707565505822 18.799219395919785 14 19.82687006572781 23.74626815604978 29.07256894908512 27.35429282913729 15 21.296126380510945 30.10179819135061 27.32587852490297 21.27619690323548 16 20.453661992118978 29.21858690140039 28.463042658947447 21.864708447533186 17 20.615367008230283 27.07291228859462 28.148808079133836 24.16291262404126 18 22.497420020639836 25.119231550927708 31.661427779323464 20.721920649108995 19 21.623384183098622 24.316034152415117 33.37881595226397 20.681765712222294 20 22.8339519364151 23.831905711867115 33.43317804126783 19.900964310449954 21 21.861847284954035 24.698541991013975 34.051287819142956 19.388322904889037 22 19.682726668205774 25.16589809920144 33.39923873343239 21.752136499160397 23 21.287641553552085 25.601288115125286 34.62598685443786 18.485083476884768 24 21.06121506668482 25.201317318715756 31.873548453294976 21.863919161304455 25 20.72024341587294 26.19611394925284 32.73860615998437 20.345036474889845 26 20.54048347727941 26.940016219832003 32.68315880241601 19.836341500472585 27 19.183305806976104 26.955012658177896 32.41785996878373 21.443821566062272 28 20.08269746461531 26.3468676189405 32.47488589880956 21.095549017634628 29 20.227235505251713 25.88513517513275 31.449701748466317 22.43792757114922 30 20.441625377130826 26.382385499233408 33.498886119809704 19.677103003826065 31 21.833136998383935 25.79446591960725 33.15436268096853 19.218034401040278 32 21.07315302089438 26.0922241493961 31.74519078034756 21.08943204936196 33 20.518383462874937 26.24396442686967 32.37306797530323 20.86458413495216 34 19.4196970324811 27.095505606892047 33.36184629834625 20.122951062280602 35 18.930043588331984 29.542391576737366 31.78090598219765 19.746658852733002 36 21.866780323883603 26.464964570914407 31.3397936411155 20.328461464086487 37 20.772829610862157 27.789978827396915 31.2193288304554 20.21786273128553 38 20.771152377626105 25.671731911039547 32.6843427317591 20.872772979575245 39 20.112493019749913 25.5196956512302 33.50608835664687 20.86172297237301 40 18.419375398342893 26.31845331470618 32.780438330107124 22.481732956843803 41 20.638946934313626 25.286658892197313 32.75606911779505 21.31832505569401 42 19.123320053592536 27.91221953207166 31.808826982539017 21.15563343179679 43 19.490239489173952 28.256841631691422 30.487857817978757 21.765061061155873 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 62.0 1 103.5 2 145.0 3 352.5 4 560.0 5 560.0 6 1104.5 7 1649.0 8 1860.0 9 2071.0 10 3349.5 11 4628.0 12 4628.0 13 8976.5 14 13325.0 15 22253.0 16 31181.0 17 29968.5 18 28756.0 19 28756.0 20 30877.0 21 32998.0 22 26331.0 23 19664.0 24 21314.0 25 22964.0 26 22964.0 27 24574.5 28 26185.0 29 26985.0 30 27785.0 31 30102.5 32 32420.0 33 32420.0 34 35320.0 35 38220.0 36 41580.5 37 44941.0 38 46946.0 39 48951.0 40 48951.0 41 50623.0 42 52295.0 43 54186.5 44 56078.0 45 62005.5 46 67933.0 47 67933.0 48 94452.0 49 120971.0 50 109778.5 51 98586.0 52 86893.0 53 75200.0 54 75200.0 55 63508.5 56 51817.0 57 42149.5 58 32482.0 59 28450.0 60 24418.0 61 24418.0 62 21315.0 63 18212.0 64 15721.0 65 13230.0 66 11105.0 67 8980.0 68 8980.0 69 7650.0 70 6320.0 71 5337.0 72 4354.0 73 3589.0 74 2824.0 75 2824.0 76 2238.0 77 1652.0 78 1273.0 79 894.0 80 667.5 81 441.0 82 441.0 83 316.5 84 192.0 85 145.5 86 99.0 87 77.0 88 55.0 89 55.0 90 39.5 91 24.0 92 16.0 93 8.0 94 5.5 95 3.0 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1013574.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.39398286348171 #Duplication Level Percentage of deduplicated Percentage of total 1 82.09501069850815 42.19189573016476 2 10.309798380903347 10.597232026281963 3 3.010442402328983 4.641558757103835 4 1.3127683068945812 2.6987356747304805 5 0.7157645579497933 1.8392995712779618 6 0.44026565024467185 1.3576203170432577 7 0.3149556303910429 1.133077698975204 8 0.24419610141162032 1.0040168201022288 9 0.1824400331170205 0.8438687942066269 >10 1.2053479732230663 11.694687161914095 >50 0.09785058087268819 3.4647530877817427 >100 0.057237137351217736 5.383010575409044 >500 0.008121485635567784 3.1148635607833244 >1k 0.005027586345827675 5.31463719183137 >5k 1.9336870560875675E-4 0.5155828144511976 >10k+ 5.801061168262702E-4 4.20516021794294 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 15425 1.5218425097723502 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14646 1.4449857632496492 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12243 1.2079039122945143 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5188 0.5118521193321849 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4287 0.42295875782133324 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 4206 0.4149672347554298 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 4161 0.4105274997188168 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3920 0.3867502520782893 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3874 0.3822118562630849 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 3536 0.3488645130991916 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2133 0.2104434407354569 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2103 0.2074836173777149 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1912 0.18863940866675744 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1885 0.18597556764478962 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1874 0.18489029908028423 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1836 0.181141189493811 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1741 0.17176841552762798 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1452 0.14325545051471328 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1384 0.13654651757049807 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1369 0.13506660589162706 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1326 0.13082419241219684 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1298 0.1280616906116376 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 1283 0.12658177893276662 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1276 0.12589115348262683 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1256 0.12391793791079883 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 1165 0.11493980705898138 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 1102 0.10872417800772316 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1076 0.10615899776434676 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 1014 0.10004202949167995 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 9.866077859140033E-5 0.0 0.0 0.0 0.0 7 9.866077859140033E-5 0.0 0.0 0.0 0.0 8 9.866077859140033E-5 0.0 0.0 0.0 0.0 9 9.866077859140033E-5 0.0 0.0 0.0 0.0 10 9.866077859140033E-5 0.0 0.0 2.95982335774201E-4 0.0 11 9.866077859140033E-5 0.0 0.0 8.87947007322603E-4 0.0 12 9.866077859140033E-5 0.0 0.0 0.001775894014645206 0.0 13 9.866077859140033E-5 0.0 0.0 0.0019732155718280068 0.0 14 1.9732155718280066E-4 0.0 0.0 0.0022691979076022075 0.0 15 1.9732155718280066E-4 0.0 0.0 0.0027625018005592093 0.0 16 1.9732155718280066E-4 0.0 0.0 0.004341074258021615 0.0 17 3.946431143656013E-4 0.0 0.0 0.005130360486752817 0.0 18 5.91964671548402E-4 0.0 0.0 0.006215629051258221 0.0 19 5.91964671548402E-4 0.0 0.0 0.007300897615763625 0.0 20 5.91964671548402E-4 0.0 0.0 0.010260720973505635 0.0 21 6.906254501398023E-4 0.0 0.0 0.01805492248222626 0.0 22 6.906254501398023E-4 0.0 0.0 0.0292035904630545 0.0 23 8.87947007322603E-4 0.0 0.0 0.03660314885740952 0.0 24 8.87947007322603E-4 0.0 0.0 0.04706119138809796 0.0 25 8.87947007322603E-4 0.0 0.0 0.05238887343203358 0.0 26 8.87947007322603E-4 0.0 0.0 0.06097236116948541 0.0 27 8.87947007322603E-4 0.0 0.0 0.12894963761896022 0.0 28 8.87947007322603E-4 0.0 0.0 0.22238139494501635 0.0 29 8.87947007322603E-4 0.0 0.0 0.3297243220524599 0.0 30 9.866077859140034E-4 0.0 0.0 0.5171798013761205 0.0 31 9.866077859140034E-4 0.0 0.0 0.7650156771977181 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3455 0.0 30.413895 1 GTATTGG 340 0.0 24.485294 1 GGTCTAG 40 0.0019310308 23.125 1 ATTGGAC 385 0.0 19.701298 3 GCGAACT 100 2.8740942E-7 18.5 23 CGCTAGA 50 0.007034322 18.5 1 GTATCAA 5905 0.0 17.920406 2 CGAACTA 95 3.6055353E-6 17.526316 24 CGCCGGA 85 2.7226011E-5 17.411764 14 TTGGACC 605 0.0 17.123966 4 GGGTCGG 65 0.0015797601 17.076923 24 GCGTGCG 65 0.0015797601 17.076923 9 TGGACCC 640 0.0 17.054688 5 GGACCCT 655 0.0 16.664122 6 TATTGGA 475 0.0 16.357895 2 GTCGTAA 70 0.00259221 15.857143 1 TGCGTTA 70 0.00259221 15.857143 37 TACTCCG 105 9.340842E-6 15.857142 5 GACCCTC 630 0.0 15.563493 7 CGTGTCT 110 1.4514524E-5 15.136364 35 >>END_MODULE