##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088330_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3171679 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.933405303626248 31.0 31.0 33.0 28.0 34.0 2 31.250846633596904 31.0 31.0 34.0 28.0 34.0 3 31.316012433792952 31.0 31.0 34.0 28.0 34.0 4 35.20717796473098 35.0 35.0 37.0 33.0 37.0 5 34.96192300671033 35.0 35.0 37.0 32.0 37.0 6 35.00634238206325 36.0 35.0 37.0 32.0 37.0 7 34.818183365971144 35.0 35.0 37.0 32.0 37.0 8 34.8841452744745 36.0 35.0 37.0 32.0 37.0 9 36.357614373964076 38.0 35.0 39.0 32.0 39.0 10 36.1596290166817 38.0 35.0 39.0 31.0 39.0 11 36.25897166768768 38.0 35.0 39.0 32.0 39.0 12 36.01376652555319 38.0 35.0 39.0 30.0 39.0 13 36.09725637430522 38.0 35.0 39.0 31.0 39.0 14 36.921598308025494 39.0 36.0 40.0 31.0 41.0 15 37.056409239396544 39.0 36.0 40.0 31.0 41.0 16 37.030870084898254 39.0 36.0 40.0 31.0 41.0 17 37.10280012573782 39.0 36.0 40.0 31.0 41.0 18 37.11825913025877 39.0 36.0 40.0 31.0 41.0 19 37.20694401924028 39.0 36.0 40.0 31.0 41.0 20 37.192242342305136 39.0 36.0 40.0 31.0 41.0 21 37.12969786665044 39.0 36.0 40.0 31.0 41.0 22 37.055153752949145 39.0 36.0 40.0 31.0 41.0 23 36.93849818976006 39.0 35.0 40.0 31.0 41.0 24 36.852595108143035 39.0 35.0 40.0 31.0 41.0 25 36.7191812286174 38.0 35.0 40.0 30.0 41.0 26 36.487491010281936 38.0 35.0 40.0 30.0 41.0 27 36.35665116173484 38.0 35.0 40.0 30.0 41.0 28 36.19218306770641 38.0 35.0 40.0 30.0 41.0 29 35.97093306100649 38.0 34.0 40.0 29.0 41.0 30 35.76204401517304 38.0 34.0 40.0 29.0 41.0 31 35.522110528839775 38.0 34.0 40.0 27.0 41.0 32 35.409016170930286 38.0 34.0 40.0 27.0 41.0 33 35.226376944198954 38.0 34.0 40.0 27.0 41.0 34 35.37755050243105 38.0 34.0 40.0 27.0 41.0 35 35.2925945532319 38.0 34.0 40.0 27.0 41.0 36 35.222924829404235 38.0 34.0 40.0 26.0 41.0 37 35.111024161020076 38.0 34.0 40.0 26.0 41.0 38 35.06722401604954 38.0 33.0 40.0 25.0 41.0 39 34.958149610978914 38.0 33.0 40.0 25.0 41.0 40 34.75560137075662 38.0 33.0 40.0 24.0 41.0 41 34.63177673402636 38.0 33.0 40.0 23.0 41.0 42 34.47382537766275 38.0 33.0 40.0 23.0 41.0 43 34.10306875317458 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 4.0 14 8.0 15 15.0 16 37.0 17 88.0 18 261.0 19 586.0 20 1303.0 21 2684.0 22 4709.0 23 8145.0 24 13668.0 25 21348.0 26 32298.0 27 46938.0 28 64833.0 29 85802.0 30 109449.0 31 133875.0 32 162537.0 33 195788.0 34 235236.0 35 278486.0 36 339558.0 37 428436.0 38 515512.0 39 490073.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.99916132748616 22.81441469959602 14.493553729743772 22.692870243174042 2 18.190050128023675 24.071919005674914 35.93752709527036 21.800503771031053 3 19.397517844649474 25.353290796451972 33.74367330363508 21.505518055263472 4 13.27650118438846 16.768216455700593 36.961054381606715 32.99422797830424 5 11.933805407167624 38.8880463628255 35.724926765917985 13.453221464088895 6 31.00461931992487 37.881576288142654 14.024149354332515 17.08965503759996 7 24.16726282830009 34.5909532458991 22.342456471793014 18.899327454007796 8 25.956189135155228 34.868724104803796 19.927804799918277 19.2472819601227 9 23.833181100609487 14.682538806732964 23.515841294153663 37.96843879850388 10 15.691405088598184 27.890022918460538 34.80273382016276 21.615838172778517 11 31.68987151600146 22.854645757026486 25.046702393274984 20.408780333697074 12 20.601958773255426 27.53576260397096 31.86580356965506 19.996475053118555 13 30.965744011294966 21.727545568135994 27.836612721526986 19.470097699042054 14 19.734058837606202 23.839613025151664 29.09276127880533 27.333566858436807 15 21.30890295014092 30.097087378640776 27.188722440070386 21.405287231147916 16 20.722494300337456 29.260054374985618 28.15196619834479 21.86548512633214 17 20.4577134066846 27.336152239870426 28.179900929444624 24.02623342400035 18 22.20019743486021 25.920718963047644 31.394696625982643 20.4843869761095 19 21.50715756544089 25.209360720299877 32.71563736431083 20.567844349948402 20 22.65314365041355 24.701459384761193 32.67912673382142 19.96627023100383 21 21.567378035419097 25.5594276722203 33.20373846155301 19.669455830807596 22 19.858535494922407 25.911386366653122 32.69151764727767 21.538560491146804 23 21.26006446427901 26.083282702946924 33.753951771285806 18.90270106148825 24 21.028704355011968 25.842558468243475 31.345921198204486 21.782815978540075 25 20.797596478079907 26.57759502143817 32.27079411251895 20.35401438796297 26 20.45597930938156 27.499062799230312 31.95938176593533 20.085576125452796 27 19.15840159108157 27.546324832998547 31.757028375191815 21.538245200728067 28 20.02472507463712 26.91092005212381 31.7508802120265 21.313474661212563 29 20.15263839751753 26.68164085962041 31.03715729113823 22.128563451723835 30 20.487130002752487 27.01096170198813 32.8368350012722 19.66507329398719 31 21.539254130068016 26.623438248322103 32.45287432933787 19.38443329227201 32 20.918384237496923 26.75144615832813 31.21747188161223 21.112697722562718 33 20.39988914388877 26.69598657367281 31.96458405784444 20.939540224593976 34 19.509067594797582 27.487996105532748 32.624329259045446 20.378607040624225 35 19.101901548044427 29.653568346607585 31.26728776777221 19.977242337575777 36 21.58481359557509 27.177340455954084 30.837673043205193 20.400172905265634 37 20.803492408910234 27.89881952114322 30.77597070825894 20.52171736168761 38 20.42385121571256 26.28137967303753 32.16870307493287 21.12606603631704 39 19.978503499250714 25.9858579635581 32.95084401668643 21.084794520504754 40 18.62010625917692 26.42370176805408 32.56899579055762 22.387196182211376 41 20.521370542227004 25.494225613626092 32.50927978524939 21.47512405889751 42 18.96421422218327 27.853386171803642 31.77200467008168 21.41039493593141 43 19.32664055851806 28.01235560092935 30.797032108230372 21.86397173232222 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 211.0 1 368.5 2 526.0 3 1412.5 4 2299.0 5 2299.0 6 3846.5 7 5394.0 8 6012.5 9 6631.0 10 10245.5 11 13860.0 12 13860.0 13 25722.5 14 37585.0 15 60866.5 16 84148.0 17 82529.0 18 80910.0 19 80910.0 20 88141.5 21 95373.0 22 80751.5 23 66130.0 24 72884.0 25 79638.0 26 79638.0 27 84490.0 28 89342.0 29 92745.5 30 96149.0 31 104849.0 32 113549.0 33 113549.0 34 122700.0 35 131851.0 36 141620.0 37 151389.0 38 156700.5 39 162012.0 40 162012.0 41 167296.0 42 172580.0 43 177961.0 44 183342.0 45 195345.5 46 207349.0 47 207349.0 48 278669.0 49 349989.0 50 318981.5 51 287974.0 52 255690.5 53 223407.0 54 223407.0 55 192579.5 56 161752.0 57 133800.5 58 105849.0 59 91953.5 60 78058.0 61 78058.0 62 67914.0 63 57770.0 64 50370.5 65 42971.0 66 36622.0 67 30273.0 68 30273.0 69 25500.5 70 20728.0 71 17128.5 72 13529.0 73 11107.0 74 8685.0 75 8685.0 76 6835.5 77 4986.0 78 3868.0 79 2750.0 80 2105.5 81 1461.0 82 1461.0 83 1051.5 84 642.0 85 492.5 86 343.0 87 239.5 88 136.0 89 136.0 90 114.0 91 92.0 92 51.5 93 11.0 94 6.5 95 2.0 96 2.0 97 2.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3171679.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.61369310612021 #Duplication Level Percentage of deduplicated Percentage of total 1 71.14653703920652 27.47230546795135 2 14.015301084516329 10.823650697347746 3 5.830374780860067 6.753969074453805 4 2.940992673786079 4.542503541316942 5 1.5914370221251823 3.0725630385029814 6 0.9775554821067924 2.2648216428166243 7 0.6456466614212241 1.7451561427377174 8 0.46088924924930497 1.4237308821138246 9 0.33207752366209786 1.1540465627515755 >10 1.758186603387989 12.662597825427776 >50 0.16015268729504595 4.281824009003995 >100 0.12316591497181849 9.044844971479495 >500 0.009211753814405275 2.3856025703310793 >1k 0.007320054370354596 5.7624961176414935 >5k 4.934868114845795E-4 1.3404484755010857 >10k+ 6.579824153127727E-4 5.269438980622649 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 39402 1.2423073078959126 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 37924 1.1957073840070196 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 32683 1.030463675548503 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13592 0.4285427371433238 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 10763 0.3393470776834604 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 10654 0.3359104121192592 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 10593 0.3339871405649815 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 10309 0.3250328926729344 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 9614 0.30312020857091776 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 9376 0.29561629660504735 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 6511 0.2052855916377414 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5765 0.1817649264001811 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 5489 0.17306291084312125 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5452 0.17189633629380527 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4902 0.1545553632634324 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4794 0.15115022674110462 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4780 0.15070882015487697 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 3979 0.12545405761427939 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3974 0.12529641240491235 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3833 0.12085081750076222 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3796 0.11968424295144622 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3758 0.11848613936025683 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3462 0.10915354296572888 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3406 0.10738791662081817 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 3261 0.10281620554917442 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.1529041873405225E-5 0.0 3 0.0 0.0 0.0 3.1529041873405225E-5 0.0 4 0.0 0.0 0.0 3.1529041873405225E-5 0.0 5 0.0 3.1529041873405225E-5 0.0 6.305808374681045E-5 0.0 6 3.1529041873405225E-5 3.1529041873405225E-5 0.0 6.305808374681045E-5 0.0 7 3.1529041873405225E-5 3.1529041873405225E-5 0.0 9.458712562021567E-5 0.0 8 6.305808374681045E-5 3.1529041873405225E-5 0.0 9.458712562021567E-5 0.0 9 6.305808374681045E-5 3.1529041873405225E-5 0.0 1.5764520936702612E-4 0.0 10 6.305808374681045E-5 3.1529041873405225E-5 0.0 2.2070329311383655E-4 0.0 11 6.305808374681045E-5 6.305808374681045E-5 0.0 3.4681946060745745E-4 0.0 12 6.305808374681045E-5 6.305808374681045E-5 0.0 5.990517955946992E-4 0.0 13 6.305808374681045E-5 6.305808374681045E-5 0.0 6.621098793415097E-4 0.0 14 6.305808374681045E-5 6.305808374681045E-5 0.0 7.882260468351306E-4 0.0 15 6.305808374681045E-5 6.305808374681045E-5 0.0 0.0011035164655691827 0.0 16 6.305808374681045E-5 6.305808374681045E-5 0.0 0.0014503359261766402 0.0 17 9.458712562021567E-5 6.305808374681045E-5 0.0 0.0022070329311383655 0.0 18 9.458712562021567E-5 6.305808374681045E-5 0.0 0.0026484395173660387 0.0 19 9.458712562021567E-5 6.305808374681045E-5 0.0 0.003247491312960738 0.0 20 9.458712562021567E-5 6.305808374681045E-5 0.0 0.00488700149037781 0.0 21 9.458712562021567E-5 6.305808374681045E-5 0.0 0.008134492803338547 0.0 22 9.458712562021567E-5 6.305808374681045E-5 0.0 0.012895378126222736 0.0 23 9.458712562021567E-5 6.305808374681045E-5 0.0 0.0163005146485505 0.0 24 9.458712562021567E-5 6.305808374681045E-5 0.0 0.021818096976396414 0.0 25 9.458712562021567E-5 6.305808374681045E-5 0.0 0.026515924215533792 0.0 26 9.458712562021567E-5 6.305808374681045E-5 0.0 0.03632145623816282 0.0 27 9.458712562021567E-5 6.305808374681045E-5 0.0 0.11917977828147173 0.0 28 1.261161674936209E-4 6.305808374681045E-5 0.0 0.21773956317773646 0.0 29 1.261161674936209E-4 1.261161674936209E-4 0.0 0.32642017051536426 0.0 30 1.261161674936209E-4 1.261161674936209E-4 0.0 0.5043385538069899 0.0 31 1.261161674936209E-4 1.261161674936209E-4 0.0 0.7485309831165133 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9595 0.0 30.57947 1 ATTGGAC 755 0.0 22.298014 3 GTATTGG 870 0.0 19.775862 1 GTATCAA 16645 0.0 17.705317 2 CGAATTA 305 0.0 17.590164 15 TTGGACC 1540 0.0 16.457792 4 GGACCCT 1575 0.0 15.622222 6 GATACTG 1145 0.0 15.349344 36 GACCCTC 1630 0.0 15.208589 7 GACCGTC 160 1.0984877E-8 15.03125 22 TGATACT 1140 0.0 14.929824 35 ACCGTCG 175 2.242814E-9 14.8 23 AATGCGT 300 0.0 14.799999 35 GCTAGCG 75 0.0041065244 14.799999 20 TGGACCC 1685 0.0 14.712166 5 TATACCG 190 4.5656634E-10 14.605264 5 ACGTTTA 230 1.8189894E-12 14.478261 26 CGAACTA 180 3.3378456E-9 14.388888 24 TATTGGA 1260 0.0 14.242064 2 TACGTTA 315 0.0 14.095239 19 >>END_MODULE