##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088328_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 539688 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.920050103022486 31.0 31.0 33.0 28.0 34.0 2 31.273713701249612 31.0 31.0 34.0 28.0 34.0 3 31.366183795081604 31.0 31.0 34.0 28.0 34.0 4 35.25912749588651 35.0 35.0 37.0 33.0 37.0 5 34.93932049628674 35.0 35.0 37.0 32.0 37.0 6 35.00675946102192 36.0 35.0 37.0 32.0 37.0 7 34.84692266642949 35.0 35.0 37.0 32.0 37.0 8 34.8821318984302 35.0 35.0 37.0 32.0 37.0 9 36.391394657654054 38.0 35.0 39.0 32.0 39.0 10 36.154300262373816 38.0 35.0 39.0 32.0 39.0 11 36.27795318776775 38.0 35.0 39.0 32.0 39.0 12 36.025635181808745 38.0 35.0 39.0 30.0 39.0 13 36.11907064822638 38.0 35.0 39.0 31.0 39.0 14 36.96165747617142 39.0 36.0 40.0 31.0 41.0 15 37.103811832021464 39.0 36.0 40.0 31.0 41.0 16 37.09962793317621 39.0 36.0 40.0 31.0 41.0 17 37.13658261810527 39.0 36.0 40.0 31.0 41.0 18 37.123862305628435 39.0 36.0 40.0 31.0 41.0 19 37.201490490802094 39.0 36.0 40.0 31.0 41.0 20 37.18189954195758 39.0 36.0 40.0 31.0 41.0 21 37.114701457138196 39.0 36.0 40.0 31.0 41.0 22 37.022411096781845 39.0 36.0 40.0 31.0 41.0 23 36.91722439631787 39.0 36.0 40.0 31.0 41.0 24 36.84998369428262 39.0 35.0 40.0 31.0 41.0 25 36.73567690962186 38.0 35.0 40.0 30.0 41.0 26 36.515735017269236 38.0 35.0 40.0 30.0 41.0 27 36.388541157112996 38.0 35.0 40.0 30.0 41.0 28 36.24033886245386 38.0 35.0 40.0 30.0 41.0 29 36.048476156594184 38.0 34.0 40.0 29.0 41.0 30 35.86466625161204 38.0 34.0 40.0 29.0 41.0 31 35.69537214094069 38.0 34.0 40.0 28.0 41.0 32 35.56288448140407 38.0 34.0 40.0 27.0 41.0 33 35.394589095922086 38.0 34.0 40.0 27.0 41.0 34 35.59940187663984 38.0 34.0 40.0 28.0 41.0 35 35.57505447591942 38.0 34.0 40.0 27.0 41.0 36 35.53163123878982 38.0 34.0 40.0 27.0 41.0 37 35.452346540964406 38.0 34.0 40.0 27.0 41.0 38 35.46328990083159 38.0 34.0 40.0 27.0 41.0 39 35.38593038941018 38.0 34.0 40.0 26.0 41.0 40 35.253750314996815 38.0 34.0 40.0 26.0 41.0 41 35.17063006774284 38.0 34.0 40.0 25.0 41.0 42 35.090572701264435 38.0 34.0 40.0 25.0 41.0 43 34.73692022057189 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 1.0 16 1.0 17 12.0 18 47.0 19 82.0 20 185.0 21 406.0 22 718.0 23 1205.0 24 2051.0 25 3282.0 26 4969.0 27 7131.0 28 10190.0 29 13661.0 30 17784.0 31 21991.0 32 27159.0 33 33038.0 34 39558.0 35 47727.0 36 58318.0 37 72508.0 38 90904.0 39 86759.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.40035724344436 22.97327344688042 13.990861386578912 23.63550792309631 2 17.894598360534232 23.776515319962645 35.748988304353624 22.579898015149492 3 18.990231392952968 25.702628185173655 32.72186893167904 22.585271490194334 4 13.634914987918945 17.216799335912604 37.66546597293251 31.482819703235943 5 12.550028905589897 38.41330546538 35.862943033752835 13.17372259527727 6 30.968077852388788 38.60508293680793 15.295874653503505 15.130964557299773 7 24.74985547205052 33.49639050710781 23.512103289307895 18.241650731533777 8 25.146936748639952 35.40730940839893 20.65860274825455 18.787151094706573 9 24.369635789567308 14.789470953588 23.01904063088303 37.82185262596167 10 15.445405493544417 28.046204473695912 35.582039993477714 20.926350039281953 11 32.298846741080034 23.51803264108151 24.254569306710543 19.92855131112791 12 19.76845881324024 27.3322734617038 32.26030595455152 20.63896177050444 13 29.362891151924813 22.23043684499192 27.112516861594106 21.294155141489156 14 19.88611938749796 23.413157231585657 28.928566134507346 27.772157246409034 15 22.04477401758053 30.445183142852905 25.77970975823068 21.730333081335885 16 21.331398882317192 29.17278131068321 27.386193504395134 22.109626302604468 17 20.686952461422155 28.235387853722894 28.32191933116912 22.755740353685834 18 21.49723543973555 27.339685151420824 30.188738678643958 20.97434073019967 19 21.507426513096455 26.893130845970266 31.163746460918162 20.43569618001512 20 22.041624049450796 26.695979899497484 30.78426794740665 20.47812810364507 21 21.42163620462193 27.132899008315913 30.882843420643034 20.562621366419116 22 20.857791909399506 27.38786113458146 30.585078786261693 21.16926816975734 23 21.35215161352485 27.420472569336358 30.844673218600377 20.382702598538415 24 21.308793228680276 27.43344302634115 29.817783608307018 21.439980136671558 25 21.32676657624405 27.461422155022902 30.538570433287383 20.673240835445664 26 20.86557418360238 28.206482263826505 30.080713301018363 20.847230251552748 27 20.433102088614163 28.17220319888528 30.079972132046663 21.314722580453893 28 20.668793821615452 28.048427980611017 30.035872578230382 21.246905619543142 29 20.650449889565824 28.014148915669796 29.835756955870803 21.499644238893584 30 21.030298987563185 28.169238522998473 30.52207942366701 20.278383065771337 31 21.58339633269593 27.716384281288448 30.348090007559925 20.3521293784557 32 20.980455374216213 27.98746683268852 29.988623056284368 21.043454736810897 33 20.85834778612828 27.731578245208343 30.259149730955663 21.150924237707713 34 20.469604660470495 27.800877544062498 30.84986140140229 20.879656394064718 35 20.343050058552347 28.793302797171698 30.15316256800225 20.7104845762737 36 21.471850402454752 27.711010806243607 29.848912705118515 20.96822608618313 37 20.871132950890146 27.75900149716132 30.177991728554275 21.191873823394257 38 20.702702302070826 27.110849231407773 30.813544121788883 21.37290434473251 39 20.344347104252826 26.8970219830717 31.49708720594121 21.261543706734262 40 19.70675649634604 27.06248795600421 31.338847630482796 21.891907917166957 41 20.424022768710813 26.41155630660678 31.420932094098813 21.743488830583598 42 19.589651798817094 27.647270274677222 30.859681890277347 21.90339603622834 43 19.80107024799514 27.332458753946725 30.54487036954685 22.321600628511288 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 55.0 1 79.0 2 103.0 3 272.5 4 442.0 5 442.0 6 670.0 7 898.0 8 973.5 9 1049.0 10 1591.0 11 2133.0 12 2133.0 13 3555.5 14 4978.0 15 7496.0 16 10014.0 17 9999.5 18 9985.0 19 9985.0 20 11154.5 21 12324.0 22 11490.5 23 10657.0 24 12151.0 25 13645.0 26 13645.0 27 15273.0 28 16901.0 29 18009.0 30 19117.0 31 21005.5 32 22894.0 33 22894.0 34 24985.5 35 27077.0 36 28652.0 37 30227.0 38 31449.5 39 32672.0 40 32672.0 41 33476.0 42 34280.0 43 35012.0 44 35744.0 45 36035.0 46 36326.0 47 36326.0 48 41347.0 49 46368.0 50 42833.5 51 39299.0 52 35511.5 53 31724.0 54 31724.0 55 28744.5 56 25765.0 57 22837.5 58 19910.0 59 18078.0 60 16246.0 61 16246.0 62 14157.0 63 12068.0 64 10481.5 65 8895.0 66 7517.0 67 6139.0 68 6139.0 69 5260.0 70 4381.0 71 3686.5 72 2992.0 73 2452.5 74 1913.0 75 1913.0 76 1514.5 77 1116.0 78 883.0 79 650.0 80 506.5 81 363.0 82 363.0 83 270.5 84 178.0 85 135.5 86 93.0 87 71.0 88 49.0 89 49.0 90 32.0 91 15.0 92 9.0 93 3.0 94 1.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 539688.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.17781408707137 #Duplication Level Percentage of deduplicated Percentage of total 1 83.5260444279664 52.769929062985256 2 9.955956673512866 12.579911595562669 3 2.8148518018166966 5.335085514534994 4 1.1450801468524332 2.8937464253055767 5 0.6109493967347309 1.9299223701757622 6 0.35896956732561325 1.3607347552448426 7 0.26490984898404607 1.171549763226375 8 0.19040630261896832 0.9623563190294266 9 0.1381472149714098 0.7855055157699371 >10 0.8937001540795216 10.600861157530183 >50 0.06751868514395512 2.8997370193536476 >100 0.03023662578353232 3.5002707249449503 >500 0.0020549163153856342 0.875206779580086 >1k 0.0011742378945060767 2.335182996756275 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3946 0.7311631905841893 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 3931 0.7283838069403062 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3196 0.5921940083900328 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1518 0.281273624760973 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 864 0.1600924978876684 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 744 0.13785742873660337 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 712 0.13192807696298603 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 687 0.12729577088984748 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 632 0.11710469752894265 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 551 0.10209602585197373 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.8529224292554216E-4 0.0 3 0.0 0.0 0.0 3.7058448585108433E-4 0.0 4 0.0 0.0 0.0 3.7058448585108433E-4 0.0 5 0.0 0.0 0.0 3.7058448585108433E-4 0.0 6 0.0 0.0 0.0 3.7058448585108433E-4 0.0 7 0.0 0.0 0.0 3.7058448585108433E-4 0.0 8 0.0 0.0 0.0 3.7058448585108433E-4 0.0 9 0.0 0.0 0.0 3.7058448585108433E-4 0.0 10 0.0 0.0 0.0 3.7058448585108433E-4 0.0 11 0.0 0.0 0.0 3.7058448585108433E-4 0.0 12 0.0 0.0 0.0 5.558767287766265E-4 0.0 13 0.0 0.0 0.0 5.558767287766265E-4 0.0 14 0.0 0.0 0.0 5.558767287766265E-4 0.0 15 0.0 0.0 0.0 5.558767287766265E-4 0.0 16 0.0 0.0 0.0 0.001111753457553253 0.0 17 0.0 0.0 0.0 0.0016676301863298795 0.0 18 0.0 1.8529224292554216E-4 0.0 0.0016676301863298795 0.0 19 0.0 1.8529224292554216E-4 0.0 0.0020382146721809637 0.0 20 0.0 1.8529224292554216E-4 0.0 0.002223506915106506 0.0 21 0.0 1.8529224292554216E-4 0.0 0.0038911371014363856 0.0 22 0.0 1.8529224292554216E-4 0.0 0.007782274202872771 0.0 23 0.0 1.8529224292554216E-4 0.0 0.009820488875053735 0.0 24 0.0 1.8529224292554216E-4 0.0 0.013341041490639036 0.0 25 0.0 1.8529224292554216E-4 0.0 0.01723217859207542 0.0 26 0.0 1.8529224292554216E-4 0.0 0.02482916055202265 0.0 27 0.0 1.8529224292554216E-4 0.0 0.08819910763255807 0.0 28 0.0 1.8529224292554216E-4 0.0 0.15898074443011517 0.0 29 0.0 1.8529224292554216E-4 0.0 0.24884748224900313 0.0 30 0.0 1.8529224292554216E-4 0.0 0.3687315634218289 0.0 31 0.0 1.8529224292554216E-4 0.0 0.5823735195149791 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGACAG 25 0.0054937922 29.599998 22 CTTCCGT 35 8.8632735E-4 26.42857 35 GGTATCA 1055 0.0 26.12796 1 ACGTTTA 55 1.9002344E-5 23.545454 26 TAAGCCG 55 1.9002344E-5 23.545454 36 CGTTTAT 55 1.9002344E-5 23.545454 27 GACCGTG 40 0.0019298673 23.125 7 GTAATAC 40 0.0019298673 23.125 3 CCCGTAT 40 0.0019298673 23.125 1 TTACCCC 80 2.7190254E-8 23.125 4 TCACGTT 65 2.6784674E-6 22.76923 24 CAATGCG 45 0.0038232172 20.555557 19 TAATACT 125 4.110916E-10 19.24 4 GAGTAAT 70 1.2176769E-4 18.5 1 AAGCCGT 80 1.6140824E-5 18.5 37 CACGTTT 70 1.2176769E-4 18.5 25 TACCCCA 100 2.8679096E-7 18.499998 5 CGACGAG 50 0.0070301653 18.499998 24 CGTTTAG 50 0.0070301653 18.499998 26 CTAATAC 120 1.0381518E-7 16.958332 3 >>END_MODULE