##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088326_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3006183 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.8818109210251 31.0 31.0 33.0 28.0 34.0 2 31.20139791888917 31.0 31.0 34.0 28.0 34.0 3 31.25469973052206 31.0 31.0 34.0 28.0 34.0 4 35.156770562537275 35.0 35.0 37.0 33.0 37.0 5 34.877665464810356 35.0 35.0 37.0 32.0 37.0 6 34.962343277172415 36.0 35.0 37.0 32.0 37.0 7 34.77249721656998 35.0 35.0 37.0 32.0 37.0 8 34.84046713057722 35.0 35.0 37.0 32.0 37.0 9 36.295522261951454 38.0 35.0 39.0 32.0 39.0 10 36.08675918931083 38.0 35.0 39.0 31.0 39.0 11 36.20823715655368 38.0 35.0 39.0 32.0 39.0 12 35.962112752284206 38.0 35.0 39.0 30.0 39.0 13 36.050393472386745 38.0 35.0 39.0 30.0 39.0 14 36.80147083527516 38.0 36.0 40.0 31.0 41.0 15 36.93866707382751 38.0 36.0 40.0 31.0 41.0 16 36.912781756799234 38.0 36.0 40.0 31.0 41.0 17 37.020546985995196 38.0 36.0 40.0 31.0 41.0 18 37.02820819624088 39.0 36.0 40.0 31.0 41.0 19 37.124897918722844 39.0 36.0 40.0 31.0 41.0 20 37.11997173824747 39.0 36.0 40.0 31.0 41.0 21 37.04404588809131 39.0 36.0 40.0 31.0 41.0 22 36.96593919931022 39.0 36.0 40.0 31.0 41.0 23 36.85565316549258 39.0 35.0 40.0 31.0 41.0 24 36.76459051228751 39.0 35.0 40.0 30.0 41.0 25 36.64214254421637 38.0 35.0 40.0 30.0 41.0 26 36.39773959203415 38.0 35.0 40.0 30.0 41.0 27 36.25905542011248 38.0 35.0 40.0 30.0 41.0 28 36.079959869375884 38.0 34.0 40.0 30.0 41.0 29 35.85566081639075 38.0 34.0 40.0 29.0 41.0 30 35.61685665842698 38.0 34.0 40.0 28.0 41.0 31 35.35732488674176 38.0 34.0 40.0 27.0 41.0 32 35.23492049552539 37.0 34.0 40.0 27.0 41.0 33 35.03690127979567 37.0 33.0 40.0 27.0 41.0 34 35.16419226640561 38.0 33.0 40.0 27.0 41.0 35 35.08022199579999 38.0 33.0 40.0 26.0 41.0 36 34.99189570295621 38.0 33.0 40.0 25.0 41.0 37 34.86627061625989 38.0 33.0 40.0 25.0 41.0 38 34.80194319507495 38.0 33.0 40.0 25.0 41.0 39 34.669304895942794 38.0 33.0 40.0 24.0 41.0 40 34.46400402104596 38.0 33.0 40.0 23.0 41.0 41 34.30118658777593 38.0 33.0 40.0 23.0 41.0 42 34.124295493654245 38.0 33.0 40.0 21.0 41.0 43 33.74114017676236 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 1.0 14 5.0 15 13.0 16 29.0 17 95.0 18 280.0 19 642.0 20 1443.0 21 2638.0 22 4993.0 23 8514.0 24 14196.0 25 21948.0 26 32604.0 27 47236.0 28 64606.0 29 86366.0 30 109167.0 31 132354.0 32 159135.0 33 190505.0 34 226572.0 35 267227.0 36 324117.0 37 406519.0 38 474721.0 39 430255.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.57434294585526 22.238433255726616 14.634870864481636 22.55235293393649 2 18.527548056788294 23.82087184978426 35.77556655732535 21.876013536102093 3 19.62788027209255 25.061082442419508 33.620042425893566 21.690994859594376 4 13.476491617443118 16.162222991747342 36.18209536811299 34.17919002269655 5 11.872830097169732 38.73410234839329 35.47232487177261 13.920742682664361 6 31.737788418070355 36.990096743944065 13.387375286201806 17.884739551783774 7 24.33827215442307 34.53369272595847 21.743719527387388 19.384315592231076 8 26.410567819723553 34.44530821975908 19.479752230652625 19.664371729864747 9 23.749818291168566 14.470842260767224 23.32243246668616 38.45690698137805 10 15.915032451450891 27.539241623014966 34.35256602808279 22.193159897451352 11 31.846198318598702 22.354959761265366 24.815222493108372 20.983619427027563 12 21.073401053761533 27.272291806586622 31.605394615031752 20.048912524620093 13 31.680805859124344 21.325148868182676 27.71853875828584 19.27550651440714 14 19.979821587707736 23.48905572282193 28.915771262095486 27.615351427374847 15 21.416893116619978 29.76408954478154 27.17229789404038 21.646719444558098 16 20.95594313453306 28.7866374069709 27.9091791817065 22.348240276789536 17 20.70196658021152 26.726516649186028 27.76471026547619 24.806806505126268 18 22.805131956371252 25.037697305852635 31.343101867052003 20.814068870724103 19 21.917960416914074 24.359262227216373 32.76264285973276 20.960134496136796 20 23.214255419580248 23.620351788297654 32.84933086242587 20.31606192969623 21 22.035917307762034 24.63003749272749 33.4769373654232 19.85710783408728 22 19.830828662127356 25.089789942927627 32.91173557963704 22.167645815307985 23 21.433026532316894 25.39822093332309 34.12047769546964 19.048274838890382 24 21.29324794930981 25.156552345615683 31.407203087769442 22.142996617305066 25 20.98451757594265 25.980620607594414 32.493497568178654 20.541364248284285 26 20.772720755855513 26.830202951716515 32.16377712201819 20.233299170409786 27 19.14657224793035 26.949091256254192 31.925734394745763 21.978602101069693 28 20.049511290563483 26.095483874401527 32.067375805132286 21.787629029902703 29 20.29530471032535 25.98288261226945 31.044583779497124 22.677228897908076 30 20.721526267695612 26.28845283204648 33.076595802717264 19.913425097540635 31 21.91164010973384 25.75192528199381 32.807683364585586 19.528751243686763 32 21.077193238069672 26.01455067771989 31.336216058703016 21.57204002550743 33 20.626821454315987 25.91828241993252 32.24999941786644 21.204896707885048 34 19.397821090732002 26.855118267916488 33.11691270957224 20.63014793177927 35 19.02442399547865 29.35543178841741 31.37164304368696 20.248501172416983 36 21.869892817569657 26.53517766549808 31.025323474984724 20.569606041947548 37 20.91373013552402 27.63321461135267 30.817784546050593 20.635270707072724 38 20.64242263361878 25.73605798449396 32.33312808967385 21.288391292213415 39 20.166536767721727 25.349354979387485 33.142825969011206 21.34128228387959 40 18.638818727935057 25.972504002584007 32.61102201695639 22.777655252524546 41 20.71853243797866 25.05130259867746 32.55686696385416 21.67329799948972 42 19.05855365425192 27.55268059196662 31.80391879004039 21.584846963741064 43 19.46717814584142 27.810981566990435 30.489128572678375 22.23271171448977 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 208.0 1 333.0 2 458.0 3 1277.5 4 2097.0 5 2097.0 6 3704.0 7 5311.0 8 6052.5 9 6794.0 10 10563.5 11 14333.0 12 14333.0 13 26556.5 14 38780.0 15 63881.0 16 88982.0 17 86134.5 18 83287.0 19 83287.0 20 87492.0 21 91697.0 22 73488.0 23 55279.0 24 59941.5 25 64604.0 26 64604.0 27 68989.0 28 73374.0 29 77031.0 30 80688.0 31 86489.5 32 92291.0 33 92291.0 34 101186.5 35 110082.0 36 119577.5 37 129073.0 38 135751.0 39 142429.0 40 142429.0 41 147224.5 42 152020.0 43 157650.0 44 163280.0 45 179941.5 46 196603.0 47 196603.0 48 275750.0 49 354897.0 50 322755.5 51 290614.0 52 257305.5 53 223997.0 54 223997.0 55 192294.5 56 160592.0 57 132198.0 58 103804.0 59 92593.5 60 81383.0 61 81383.0 62 72116.5 63 62850.0 64 55258.0 65 47666.0 66 39966.0 67 32266.0 68 32266.0 69 27112.0 70 21958.0 71 18216.5 72 14475.0 73 11868.0 74 9261.0 75 9261.0 76 7241.5 77 5222.0 78 3977.5 79 2733.0 80 2078.5 81 1424.0 82 1424.0 83 1080.5 84 737.0 85 549.0 86 361.0 87 266.0 88 171.0 89 171.0 90 117.5 91 64.0 92 47.5 93 31.0 94 17.0 95 3.0 96 3.0 97 3.0 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3006183.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.44817204987325 #Duplication Level Percentage of deduplicated Percentage of total 1 73.4959068805038 30.462709933445844 2 13.60418828289564 11.277374730966566 3 5.30605218511544 6.597784916228119 4 2.4902362791798307 4.128629669771273 5 1.3025080181411002 2.6993288216125877 6 0.8538957602461804 2.12354510300046 7 0.5554553320915093 1.6115825719383854 8 0.37372165247199435 1.2392063480337727 9 0.26786860310498595 0.9992397553429203 >10 1.4942679309125089 11.677366619825937 >50 0.14763517733570095 4.271972118496533 >100 0.09372899072215056 7.2417900560417285 >500 0.006702207245455174 1.8710613419720232 >1k 0.006459958790793331 5.703249603888797 >5k 5.652463941944165E-4 1.3926193363274646 >10k+ 8.074948488491664E-4 6.702539073107696 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 41558 1.38241750419053 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 41173 1.3696105659568962 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 35759 1.1895150760948352 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14382 0.47841398876914676 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 11847 0.3940877850749605 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 11595 0.3857050618674911 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 11250 0.3742287146191699 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 11182 0.37196670994413844 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 10791 0.35896018306270777 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 10723 0.3566981783876763 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 7091 0.23588051692129186 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 6496 0.2160879760147669 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 6430 0.2138925008890011 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 6000 0.1995886477968906 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5308 0.17656942375098256 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5262 0.17503924411787306 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 5022 0.16705569820599744 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4349 0.14466850487811286 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 4316 0.14357076731522997 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 4243 0.14114243876703447 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3962 0.13179503709521342 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3957 0.13162871322204936 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3904 0.12986568016651015 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3860 0.1284020300826663 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 3635 0.12091745579028289 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 3575 0.11892156931231398 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3312 0.11017293358388362 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 3182 0.10584851288161766 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 3058 0.1017236808271486 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 3.32647746328151E-5 4 0.0 0.0 0.0 3.32647746328151E-5 3.32647746328151E-5 5 0.0 0.0 0.0 3.32647746328151E-5 3.32647746328151E-5 6 0.0 0.0 0.0 3.32647746328151E-5 3.32647746328151E-5 7 0.0 0.0 0.0 6.65295492656302E-5 3.32647746328151E-5 8 0.0 0.0 0.0 6.65295492656302E-5 3.32647746328151E-5 9 0.0 0.0 0.0 9.979432389844531E-5 3.32647746328151E-5 10 0.0 0.0 0.0 2.328534224297057E-4 3.32647746328151E-5 11 0.0 0.0 0.0 8.316193658203775E-4 3.32647746328151E-5 12 0.0 0.0 0.0 0.0011310023375157134 3.32647746328151E-5 13 0.0 0.0 0.0 0.0014303853092110493 3.32647746328151E-5 14 0.0 0.0 0.0 0.0018628273794376456 3.32647746328151E-5 15 0.0 0.0 0.0 0.0024615933228283177 3.32647746328151E-5 16 0.0 0.0 0.0 0.0033930070125471404 3.32647746328151E-5 17 0.0 0.0 0.0 0.004756862772492559 3.32647746328151E-5 18 0.0 0.0 0.0 0.005455423039781676 3.32647746328151E-5 19 0.0 0.0 0.0 0.00651989582803176 3.32647746328151E-5 20 0.0 0.0 0.0 0.009746578967414824 3.32647746328151E-5 21 0.0 0.0 0.0 0.017098094161266963 3.32647746328151E-5 22 0.0 0.0 0.0 0.02594652421359578 3.32647746328151E-5 23 0.0 0.0 0.0 0.032033977971400944 3.32647746328151E-5 24 0.0 0.0 0.0 0.04091567279836258 3.32647746328151E-5 25 0.0 0.0 0.0 0.04620477196498018 3.32647746328151E-5 26 0.0 0.0 0.0 0.05788070786109828 3.32647746328151E-5 27 0.0 0.0 0.0 0.14277241272404242 3.32647746328151E-5 28 3.32647746328151E-5 0.0 0.0 0.2548414384619965 3.32647746328151E-5 29 6.65295492656302E-5 0.0 0.0 0.3825781730520065 3.32647746328151E-5 30 6.65295492656302E-5 0.0 0.0 0.5936099033225855 3.32647746328151E-5 31 6.65295492656302E-5 0.0 0.0 0.8733333932099276 3.32647746328151E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10265 0.0 29.412565 1 GTATTGG 1045 0.0 21.77512 1 ATTGGAC 1065 0.0 20.671362 3 CTAACGG 85 1.246679E-6 19.588234 27 CGTATAC 225 0.0 18.088888 3 TTGGACC 1855 0.0 17.851751 4 ACGTTTA 220 0.0 17.65909 26 TATTGGA 1280 0.0 17.488281 2 TATACCG 180 0.0 17.472221 5 GGACCCT 1920 0.0 17.247396 6 TATACTG 405 0.0 16.901234 5 TGGACCC 1975 0.0 16.579748 5 GTATCAA 18430 0.0 16.442215 2 CCCGTAT 170 8.54925E-11 16.323528 1 CCGTATA 240 0.0 16.1875 2 GACCCTC 2020 0.0 15.84406 7 GTCTAGA 155 7.221388E-9 15.5161295 1 GTATACT 250 0.0 14.799999 4 CGTGTCT 330 0.0 14.575757 35 TCTAACG 155 1.21212E-7 14.322581 2 >>END_MODULE