##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088325_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3285216 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.93533697632058 31.0 31.0 33.0 28.0 34.0 2 31.22848330216339 31.0 31.0 34.0 28.0 34.0 3 31.256633658182597 31.0 31.0 34.0 28.0 34.0 4 35.1523476690726 35.0 35.0 37.0 33.0 37.0 5 34.9012555034433 35.0 35.0 37.0 32.0 37.0 6 35.018865426200286 36.0 35.0 37.0 32.0 37.0 7 34.82350962615548 35.0 35.0 37.0 32.0 37.0 8 34.91363672890915 36.0 35.0 37.0 32.0 37.0 9 36.35807691183776 38.0 35.0 39.0 32.0 39.0 10 36.17404304618022 38.0 35.0 39.0 31.0 39.0 11 36.29340384315674 38.0 35.0 39.0 32.0 39.0 12 36.055215243076866 38.0 35.0 39.0 30.0 39.0 13 36.141724623282 38.0 35.0 39.0 31.0 39.0 14 36.88125499206141 39.0 36.0 40.0 31.0 41.0 15 36.9971971401576 38.0 36.0 40.0 31.0 41.0 16 36.958224664679584 38.0 36.0 40.0 31.0 41.0 17 37.1108249807623 39.0 36.0 40.0 31.0 41.0 18 37.11889629175068 39.0 36.0 40.0 31.0 41.0 19 37.23089166739721 39.0 36.0 40.0 31.0 41.0 20 37.22860505975863 39.0 36.0 40.0 31.0 41.0 21 37.15014903129657 39.0 36.0 40.0 31.0 41.0 22 37.06907186620301 39.0 36.0 40.0 31.0 41.0 23 36.94124221968966 39.0 35.0 40.0 31.0 41.0 24 36.84781761686294 39.0 35.0 40.0 31.0 41.0 25 36.70462642334629 38.0 35.0 40.0 30.0 41.0 26 36.44750725675268 38.0 35.0 40.0 30.0 41.0 27 36.30935073979915 38.0 35.0 40.0 30.0 41.0 28 36.121003002542295 38.0 35.0 40.0 30.0 41.0 29 35.8991892770521 38.0 34.0 40.0 29.0 41.0 30 35.61852188714532 38.0 34.0 40.0 28.0 41.0 31 35.31998687453123 37.0 34.0 40.0 27.0 41.0 32 35.189127290260366 37.0 34.0 40.0 27.0 41.0 33 34.9546288584982 37.0 33.0 40.0 26.0 41.0 34 35.0420979929478 37.0 33.0 40.0 26.0 41.0 35 34.901949521736164 37.0 33.0 40.0 25.0 41.0 36 34.7808025408375 37.0 33.0 40.0 25.0 41.0 37 34.61754600001948 37.0 33.0 40.0 24.0 41.0 38 34.49657404566397 37.0 33.0 40.0 24.0 41.0 39 34.31863445204212 37.0 33.0 40.0 23.0 41.0 40 34.05609007139866 37.0 33.0 40.0 21.0 41.0 41 33.857762168454066 37.0 33.0 40.0 20.0 41.0 42 33.61918303088747 37.0 33.0 40.0 18.0 41.0 43 33.22970209569173 37.0 32.0 40.0 16.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 3.0 14 6.0 15 15.0 16 42.0 17 144.0 18 372.0 19 717.0 20 1533.0 21 3140.0 22 5619.0 23 9602.0 24 15548.0 25 24342.0 26 36320.0 27 52611.0 28 72690.0 29 96578.0 30 121067.0 31 145511.0 32 172392.0 33 207981.0 34 248123.0 35 290895.0 36 357006.0 37 454701.0 38 512500.0 39 455756.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.894444687959634 21.841425343112903 14.570427028238022 21.69370294068944 2 18.79547646182169 23.88725733711269 35.61866251716782 21.6986036838978 3 20.141110965001996 25.02934358045255 34.06491384432561 20.764631610219844 4 12.842869388192435 15.91301759153736 36.07010924091445 35.17400377935576 5 11.505697037881223 38.90910064969853 35.26179100552292 14.323411306897324 6 31.43105354412008 36.29094707927881 12.605533395673222 19.67246598092789 7 24.21661163223362 35.08579040160525 21.3351268227112 19.362471143449927 8 27.159066557571858 33.50008036001286 18.899335690560378 20.441517391854905 9 23.423300020455276 14.196265938069216 23.892279837916288 38.48815420355922 10 16.08116483056213 27.28502478984639 33.906263697729464 22.727546681862016 11 30.82932750844998 21.837316024273594 25.714899720444564 21.618456746831868 12 21.945984678024217 27.18518356175058 31.72251078772294 19.146320972502266 13 32.66174887739497 20.56558838140323 28.37913854066217 18.39352420053963 14 20.038408433418077 23.55068890447386 29.925642636587668 26.48526002552039 15 21.34325414219339 28.888024409962693 28.74718131167022 21.021540136173694 16 20.315924432366092 28.474261661942474 29.195188383351358 22.014625522340083 17 20.75391694183883 25.90143235635039 28.06746953624967 25.277181165561107 18 23.2698854504544 23.360777495300155 32.52751112864421 20.84182592560124 19 22.21235985700788 22.817251590154193 34.510759718691254 20.459628834146674 20 23.648460253450608 21.578611573789974 34.693700505537535 20.07922766722188 21 21.933991554893197 22.97940226761345 35.93574973456845 19.15085644292491 22 19.35041714152129 23.458731480669766 35.19789870742137 21.992952670387577 23 21.3423409602291 23.66371039225427 36.81645286032943 18.177495787187205 24 20.941880229488717 23.55893798155129 33.29154003876762 22.207641750192376 25 20.95119468552448 24.57305699229518 34.481385698839894 19.994362623340443 26 20.453510514985926 25.467001256538385 34.19291151632039 19.886576712155303 27 18.427403251414823 25.958049638136426 33.88626501271149 21.728282097737257 28 19.659011766654004 24.778888207046357 33.7516315517762 21.81046847452344 29 19.75982705551172 24.842049959576478 32.56580389234681 22.832319092564994 30 20.451075363081152 25.13463346093529 35.24666262431451 19.167628551669054 31 22.031823782667562 24.71691359106981 34.43094761501222 18.8203150112504 32 21.248009263317847 24.860465795856346 32.817476841705385 21.074048099120425 33 20.545254862998355 24.816237349385855 33.83801856559812 20.80048922201767 34 18.860038426697056 26.027512346220156 34.86897056388378 20.24347866319901 35 18.365641711229948 29.45243174269211 32.711456415651206 19.470470130426737 36 22.109474689031103 25.977135141190104 31.928463760069352 19.984926409709438 37 21.09015054109075 27.4934737928952 31.513239920906265 19.903135745107782 38 20.8197269220654 25.202330683888064 33.09834117452247 20.879601219524073 39 20.110915081382778 24.75913303721886 33.91932219981882 21.210629681579537 40 18.179139514722927 25.738946845504223 33.21331078382669 22.868602855946154 41 21.011556013364114 24.721296864498406 32.99241206666472 21.27473505547276 42 18.995158918013306 28.050179957725764 31.84904736857485 21.10561375568608 43 19.93637556860797 28.39402340668011 30.061737188665827 21.607863836046093 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 135.0 1 295.0 2 455.0 3 1491.5 4 2528.0 5 2528.0 6 4761.0 7 6994.0 8 7764.0 9 8534.0 10 13783.5 11 19033.0 12 19033.0 13 35993.5 14 52954.0 15 84696.0 16 116438.0 17 113643.5 18 110849.0 19 110849.0 20 114485.0 21 118121.0 22 89646.5 23 61172.0 24 63387.0 25 65602.0 26 65602.0 27 68971.0 28 72340.0 29 73533.0 30 74726.0 31 78641.5 32 82557.0 33 82557.0 34 91201.5 35 99846.0 36 110854.5 37 121863.0 38 128534.5 39 135206.0 40 135206.0 41 139446.0 42 143686.0 43 152595.0 44 161504.0 45 187162.5 46 212821.0 47 212821.0 48 325376.5 49 437932.0 50 394470.0 51 351008.0 52 305054.5 53 259101.0 54 259101.0 55 217937.0 56 176773.0 57 142852.0 58 108931.0 59 97164.0 60 85397.0 61 85397.0 62 74640.5 63 63884.0 64 55482.0 65 47080.0 66 39548.5 67 32017.0 68 32017.0 69 27040.5 70 22064.0 71 18281.0 72 14498.0 73 11859.0 74 9220.0 75 9220.0 76 7027.0 77 4834.0 78 3639.0 79 2444.0 80 1925.0 81 1406.0 82 1406.0 83 1006.0 84 606.0 85 463.5 86 321.0 87 255.0 88 189.0 89 189.0 90 152.0 91 115.0 92 68.0 93 21.0 94 15.5 95 10.0 96 10.0 97 5.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3285216.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.53462678287672 #Duplication Level Percentage of deduplicated Percentage of total 1 72.84456054285607 25.15659711510202 2 13.31613755979188 9.197356816337185 3 5.170643138933074 5.356986930914876 4 2.55377460616403 3.5277461164585104 5 1.4459408058149346 2.4967513039475393 6 0.9016769009775032 1.8683445152399378 7 0.6420027168230511 1.5519926953353869 8 0.4334647405558843 1.197563443090716 9 0.3416897203307049 1.0620114270449776 >10 1.9692524680873027 13.041304907184426 >50 0.21574690799740567 5.172903117482337 >100 0.14324569014923183 9.22879283754137 >500 0.010132190947806 2.4414916758946887 >1k 0.009776675475950089 7.2362605138154095 >5k 0.0010665464155581916 2.648338443099918 >10k+ 8.887886796318262E-4 8.815558141510875 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 60480 1.84097484001052 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 54273 1.652037491598726 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 51772 1.575908555175672 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21746 0.6619351665156872 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 18958 0.57707012263425 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 17966 0.5468742390150297 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 17211 0.523892492913708 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 16595 0.5051418232469341 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 16581 0.5047156716635983 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 11626 0.35388845056154605 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 9500 0.28917428869212863 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 9084 0.27651149878729436 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 8524 0.2594654354538636 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 8483 0.258217420102666 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 7454 0.22689527872748702 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7188 0.21879839864410744 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 6680 0.20333518404878095 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 6630 0.20181321410829606 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 6486 0.1974299406796996 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5874 0.17880102860816457 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 5351 0.16288122303069266 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5028 0.15304929721516028 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 4865 0.14808767520917954 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 4828 0.14696141745322075 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4751 0.144617583744874 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 4745 0.1444349473520158 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 4631 0.14096485588771027 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 4164 0.12674965664358143 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 4088 0.12443626233404438 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 4067 0.12379703495904075 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 4065 0.12373615616142135 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCCT 4017 0.12227506501855585 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 3991 0.12148364064950372 No Hit CGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAG 3872 0.11786135219114968 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 3865 0.11764827639948179 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 3829 0.11655245804233269 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 3823 0.1163698216494745 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAAAAAAA 3704 0.11274753319112046 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAAAAAAA 3662 0.11146907844111316 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 3538 0.10769459298871063 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 3495 0.10638569883989363 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 3410 0.10379834994106933 No Hit GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 3385 0.10303736497082687 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 3316 0.10093704645295774 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.0878797619395495E-5 0.0 0.0 0.0 0.0 2 6.0878797619395495E-5 0.0 0.0 0.0 0.0 3 6.0878797619395495E-5 0.0 0.0 0.0 0.0 4 6.0878797619395495E-5 0.0 0.0 0.0 0.0 5 9.131819642909324E-5 0.0 0.0 3.0439398809697747E-5 0.0 6 1.2175759523879099E-4 0.0 0.0 3.0439398809697747E-5 0.0 7 1.2175759523879099E-4 0.0 0.0 3.0439398809697747E-5 0.0 8 1.8263639285818648E-4 0.0 0.0 9.131819642909324E-5 0.0 9 1.8263639285818648E-4 0.0 0.0 2.4351519047758198E-4 0.0 10 2.1307579166788423E-4 0.0 0.0 4.2615158333576846E-4 0.0 11 2.1307579166788423E-4 0.0 0.0 8.523031666715369E-4 0.0 12 2.1307579166788423E-4 0.0 0.0 0.0015219699404848874 0.0 13 2.1307579166788423E-4 0.0 0.0 0.0017959245297721673 0.0 14 2.4351519047758198E-4 0.0 0.0 0.0021003185178691446 0.0 15 2.4351519047758198E-4 0.0 0.0 0.003013500482160077 0.0 16 2.4351519047758198E-4 0.0 0.0 0.004565909821454662 0.0 17 2.4351519047758198E-4 0.0 0.0 0.0062705161547977365 0.0 18 2.4351519047758198E-4 0.0 0.0 0.007579410303614739 0.0 19 2.4351519047758198E-4 0.0 0.0 0.009344895434577208 0.0 20 2.4351519047758198E-4 0.0 0.0 0.015067502410800385 0.0 21 2.4351519047758198E-4 0.0 0.0 0.029526216845406815 0.0 22 2.4351519047758198E-4 0.0 0.0 0.04985973525028491 0.0 23 2.4351519047758198E-4 0.0 0.0 0.06197461597654462 3.0439398809697747E-5 24 2.4351519047758198E-4 0.0 0.0 0.07746826997068076 3.0439398809697747E-5 25 2.7395458928727975E-4 0.0 0.0 0.08599130163739614 3.0439398809697747E-5 26 2.7395458928727975E-4 0.0 0.0 0.09904980372675648 3.0439398809697747E-5 27 2.7395458928727975E-4 0.0 0.0 0.1758179675248142 3.0439398809697747E-5 28 2.7395458928727975E-4 0.0 0.0 0.27264569513846276 3.0439398809697747E-5 29 3.043939880969775E-4 0.0 0.0 0.3800663335378861 3.0439398809697747E-5 30 3.043939880969775E-4 0.0 0.0 0.571621470247314 3.0439398809697747E-5 31 3.043939880969775E-4 0.0 0.0 0.7879238381890262 3.0439398809697747E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 15665 0.0 28.674114 1 GTATTGG 1260 0.0 20.408731 1 ATTGGAC 1375 0.0 19.50909 3 TCTAACG 70 1.22007266E-4 18.5 2 TATTGGA 1480 0.0 17.0 2 TTGGACC 2220 0.0 16.916666 4 GTATCAA 26680 0.0 16.905172 2 TATACCG 230 0.0 16.891304 5 GACGATA 90 4.450004E-5 16.444445 16 GGACCCT 2190 0.0 16.219177 6 CAATGCG 150 4.6802597E-9 16.033333 19 TGGACCC 2290 0.0 15.914847 5 TTATGCG 270 0.0 15.759259 4 TATACTG 250 0.0 15.54 5 TTTTTAC 2935 0.0 15.064735 1 TCTATAC 185 3.0559022E-10 15.0 3 TCGCTTA 75 0.0041065654 14.8 29 TTAACGG 150 8.115421E-8 14.8 35 GATACTG 1305 0.0 14.743295 36 ACCGTCC 115 2.2122063E-5 14.478261 8 >>END_MODULE