##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088323_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1762120 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.61953896442921 31.0 30.0 31.0 27.0 34.0 2 30.913803259709894 31.0 31.0 34.0 27.0 34.0 3 30.937870860100332 31.0 31.0 34.0 27.0 34.0 4 34.85008512473611 35.0 35.0 37.0 32.0 37.0 5 34.54037920232447 35.0 35.0 37.0 30.0 37.0 6 34.65982339454748 35.0 35.0 37.0 31.0 37.0 7 34.46897316868318 35.0 35.0 37.0 30.0 37.0 8 34.554329444078725 35.0 35.0 37.0 30.0 37.0 9 35.97354833950015 37.0 35.0 39.0 30.0 39.0 10 35.714390052890835 37.0 35.0 39.0 30.0 39.0 11 35.86353483304202 37.0 35.0 39.0 30.0 39.0 12 35.60043810864186 37.0 35.0 39.0 30.0 39.0 13 35.710574194719996 37.0 35.0 39.0 30.0 39.0 14 36.418805756702156 38.0 35.0 40.0 30.0 41.0 15 36.55318082763944 38.0 35.0 40.0 30.0 41.0 16 36.50368249608426 38.0 35.0 40.0 30.0 41.0 17 36.59790536399337 38.0 35.0 40.0 30.0 41.0 18 36.59881336117858 38.0 35.0 40.0 30.0 41.0 19 36.69734467573151 38.0 35.0 40.0 30.0 41.0 20 36.69361621228974 38.0 35.0 40.0 30.0 41.0 21 36.60037681883186 38.0 35.0 40.0 30.0 41.0 22 36.51134826232039 38.0 35.0 40.0 30.0 41.0 23 36.40689510362518 38.0 35.0 40.0 30.0 41.0 24 36.314478015118155 38.0 35.0 40.0 30.0 41.0 25 36.20346230676685 38.0 34.0 40.0 30.0 41.0 26 35.91198726533948 38.0 34.0 40.0 29.0 41.0 27 35.757432524459176 38.0 34.0 40.0 28.0 41.0 28 35.581530769754615 38.0 34.0 40.0 27.0 41.0 29 35.36672303815858 38.0 34.0 40.0 27.0 41.0 30 35.13413104669375 37.0 33.0 40.0 27.0 41.0 31 34.88592434113454 37.0 33.0 40.0 26.0 41.0 32 34.76925351281411 37.0 33.0 40.0 26.0 41.0 33 34.59360599732141 37.0 33.0 40.0 25.0 41.0 34 34.72840782693574 37.0 33.0 40.0 25.0 41.0 35 34.64867148661839 37.0 33.0 40.0 25.0 41.0 36 34.57238667060132 37.0 33.0 40.0 25.0 41.0 37 34.44805688602365 37.0 33.0 40.0 24.0 41.0 38 34.39570006582979 37.0 33.0 40.0 24.0 41.0 39 34.2728486141693 37.0 33.0 40.0 23.0 41.0 40 34.070269902163304 37.0 33.0 40.0 23.0 41.0 41 33.92634553832883 37.0 33.0 40.0 22.0 41.0 42 33.733708828002634 37.0 32.0 40.0 21.0 41.0 43 33.35268483417701 37.0 32.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 3.0 15 10.0 16 26.0 17 100.0 18 230.0 19 544.0 20 1067.0 21 2000.0 22 3831.0 23 6484.0 24 10323.0 25 15855.0 26 23472.0 27 32385.0 28 44326.0 29 57425.0 30 71643.0 31 86339.0 32 101568.0 33 119773.0 34 139570.0 35 163406.0 36 196934.0 37 237977.0 38 272957.0 39 173872.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.25771230109187 23.9596622250471 14.891267337071254 21.891358136789776 2 19.201586725081153 24.911356774793997 34.62641590811069 21.260640592014166 3 20.880076271763556 25.647855991646423 33.098540394524775 20.37352734206524 4 14.47092139014369 17.184300728667743 36.08034640092615 32.26443148026241 5 11.815767371121149 39.634360883481264 35.328978730165936 13.220893015231653 6 31.5193062901505 37.837150704832816 13.552822736249517 17.090720268767168 7 24.340680543890315 34.51688874764488 22.071992826822235 19.070437881642565 8 26.263705082514242 35.10129843597485 19.5423694186548 19.092627062856103 9 23.83078337457154 14.554400381358818 23.253070165482487 38.36174607858715 10 15.792057294622385 28.13735727419245 34.653996322611405 21.416589108573763 11 32.00928427121876 22.651011281865028 24.73543232015981 20.604272126756406 12 20.49531246453136 27.483485801194018 32.044469162145596 19.976732572129027 13 31.468515197602887 21.231073933670803 27.94310262638186 19.35730824234445 14 19.803759108346764 23.521156334415362 29.095691553356183 27.579393003881687 15 21.416191859805235 30.26048169250675 27.03334619662679 21.289980251061223 16 20.59649740085806 29.15278187637618 28.32412094522507 21.92659977754069 17 20.700122579620004 27.19133770685311 28.287347059224118 23.821192654302774 18 22.18662747145484 25.513188659115155 31.459718974871176 20.840464894558828 19 21.53803373209543 24.793771139309467 32.96205706762309 20.70613806097201 20 22.6276303543459 24.358329739177808 33.04088257326402 19.973157333212267 21 21.856967743399995 25.047499602751234 33.56417270106463 19.531359952784147 22 19.891494336367558 25.516196399791163 33.024084625337665 21.568224638503622 23 21.487129139899665 25.766009125371713 33.849737815812766 18.897123918915852 24 21.06286745511089 25.534469843143487 31.59137856672644 21.811284135019182 25 21.005720382266816 26.37323224298005 32.25024402424352 20.370803350509615 26 20.7465439357138 26.981420107597664 32.2526275168547 20.019408439833835 27 19.428415771911105 27.193437450343904 31.98834358613488 21.389803191610106 28 20.40360474882528 26.465734456223185 31.994813066079498 21.13584772887204 29 20.32040950673053 26.17648060291013 31.31460967471001 22.18850021564933 30 20.61176310353438 26.6884775157197 32.98776473792932 19.711994642816606 31 21.791308196944588 26.198215785531065 32.61145665448437 19.399019363039972 32 21.068088438925837 26.36262002587792 31.40274215149933 21.16654938369691 33 20.728837990602226 26.475779175084558 31.865763966131706 20.92961886818151 34 19.742185549224796 27.353017955644336 32.64811704083717 20.256679454293693 35 19.289265203277868 29.65229382788913 31.258030100106687 19.800410868726306 36 21.91933580005902 26.94600821737453 30.933591355866795 20.201064626699658 37 20.941366081765146 28.00615168092979 30.775259346696025 20.27722289060904 38 20.86935055501328 26.276190043810864 31.98578984405148 20.868669557124374 39 20.425850679862894 26.061505459333077 32.69680838989399 20.81583547091004 40 18.935146301046466 26.89538737429914 31.94311397634667 22.22635234830772 41 20.935407350237213 25.954645540598825 31.970240392254784 21.139706716909178 42 19.488230086486734 28.250516423399084 31.095725603250628 21.16552788686355 43 19.929630218146325 28.36254057612421 29.904887294849384 21.802941910880076 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 127.0 1 174.0 2 221.0 3 554.0 4 887.0 5 887.0 6 1729.5 7 2572.0 8 2994.5 9 3417.0 10 5264.5 11 7112.0 12 7112.0 13 14258.5 14 21405.0 15 35241.0 16 49077.0 17 47230.5 18 45384.0 19 45384.0 20 49301.0 21 53218.0 22 44140.5 23 35063.0 24 38494.0 25 41925.0 26 41925.0 27 44985.0 28 48045.0 29 50751.0 30 53457.0 31 57612.0 32 61767.0 33 61767.0 34 67407.0 35 73047.0 36 79053.5 37 85060.0 38 87551.5 39 90043.0 40 90043.0 41 92507.5 42 94972.0 43 97789.5 44 100607.0 45 107626.0 46 114645.0 47 114645.0 48 153596.5 49 192548.0 50 176192.0 51 159836.0 52 142630.5 53 125425.0 54 125425.0 55 107291.0 56 89157.0 57 74147.0 58 59137.0 59 52303.5 60 45470.0 61 45470.0 62 39744.5 63 34019.0 64 29524.0 65 25029.0 66 21246.5 67 17464.0 68 17464.0 69 14786.0 70 12108.0 71 10167.5 72 8227.0 73 6768.5 74 5310.0 75 5310.0 76 4184.0 77 3058.0 78 2301.5 79 1545.0 80 1209.0 81 873.0 82 873.0 83 649.5 84 426.0 85 327.5 86 229.0 87 167.5 88 106.0 89 106.0 90 92.5 91 79.0 92 46.5 93 14.0 94 10.5 95 7.0 96 7.0 97 4.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1762120.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.020629113495005 #Duplication Level Percentage of deduplicated Percentage of total 1 79.14431730993688 39.58848542601116 2 12.111529246457984 12.11652624868645 3 3.745175845474743 5.620081557939367 4 1.5992580360840936 3.199835723189555 5 0.8351289169010576 2.08868369071313 6 0.485853962012492 1.4581632502289372 7 0.32840662297788203 1.1498974120474417 8 0.24121342962287062 0.9652518000287794 9 0.18118513773620917 0.8156695118022386 >10 1.1419275517745515 10.870676653084642 >50 0.11285485716256156 3.8938129756706306 >100 0.0623082354412252 5.820616925636086 >500 0.004222225173131967 1.518744526772588 >1k 0.005477481305684714 4.600813558346455 >5k 7.987993570790206E-4 2.5805585489105094 >10k+ 3.423425816052946E-4 3.7121821909320287 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 23767 1.3487730688034867 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 23094 1.3105804372006447 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 18173 1.031314552924886 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8366 0.4747690282160126 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6962 0.39509227521394685 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 6694 0.37988332236170064 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 6249 0.354629650648083 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 6140 0.34844391982384854 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5634 0.31972850884162257 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5164 0.2930560915261163 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3456 0.1961273920050848 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3093 0.1755272058656618 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2917 0.16553923682836583 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 2855 0.162020747735682 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2785 0.15804826005039385 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2638 0.14970603591128867 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2557 0.1451093001611695 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2527 0.14340680543890313 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2293 0.13012734660522554 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2167 0.1229768687717068 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 2161 0.12263636982725354 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 2156 0.12235262070687582 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2069 0.11741538601230336 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1958 0.11111615553991783 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1879 0.10663291943794975 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 5.6749824075545367E-5 0.0 0.0 0.0 0.0 3 5.6749824075545367E-5 0.0 0.0 0.0 0.0 4 5.6749824075545367E-5 0.0 0.0 0.0 0.0 5 5.6749824075545367E-5 0.0 0.0 0.0 0.0 6 1.1349964815109073E-4 0.0 0.0 0.0 0.0 7 1.1349964815109073E-4 0.0 0.0 5.6749824075545367E-5 0.0 8 1.702494722266361E-4 0.0 0.0 5.6749824075545367E-5 0.0 9 1.702494722266361E-4 0.0 0.0 5.6749824075545367E-5 0.0 10 1.702494722266361E-4 0.0 0.0 5.6749824075545367E-5 0.0 11 1.702494722266361E-4 0.0 0.0 2.2699929630218147E-4 0.0 12 1.702494722266361E-4 5.6749824075545367E-5 0.0 3.972487685288176E-4 0.0 13 1.702494722266361E-4 5.6749824075545367E-5 0.0 4.5399859260436293E-4 0.0 14 1.702494722266361E-4 5.6749824075545367E-5 0.0 5.107484166799082E-4 0.0 15 1.702494722266361E-4 5.6749824075545367E-5 0.0 7.944975370576351E-4 0.0 16 1.702494722266361E-4 5.6749824075545367E-5 0.0 0.001702494722266361 0.0 17 1.702494722266361E-4 5.6749824075545367E-5 0.0 0.0024402424352484506 0.0 18 1.702494722266361E-4 5.6749824075545367E-5 0.0 0.002780741379701723 0.0 19 1.702494722266361E-4 5.6749824075545367E-5 0.0 0.003858988037137085 0.0 20 1.702494722266361E-4 5.6749824075545367E-5 0.0 0.005674982407554536 0.0 21 1.702494722266361E-4 5.6749824075545367E-5 0.0 0.01089596622250471 0.0 22 1.702494722266361E-4 5.6749824075545367E-5 0.0 0.0171384468708147 0.0 23 1.702494722266361E-4 5.6749824075545367E-5 0.0 0.02031643701904524 0.0 24 1.702494722266361E-4 5.6749824075545367E-5 0.0 0.025934669602524232 0.0 25 1.702494722266361E-4 5.6749824075545367E-5 0.0 0.030417905704492317 0.0 26 1.702494722266361E-4 5.6749824075545367E-5 0.0 0.036206387760197946 0.0 27 1.702494722266361E-4 5.6749824075545367E-5 0.0 0.0845572378725626 0.0 28 1.702494722266361E-4 5.6749824075545367E-5 0.0 0.14794679136494676 0.0 29 1.702494722266361E-4 5.6749824075545367E-5 0.0 0.2222890609039112 0.0 30 1.702494722266361E-4 5.6749824075545367E-5 0.0 0.352132658388759 0.0 31 1.702494722266361E-4 5.6749824075545367E-5 0.0 0.5146074047170454 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5800 0.0 29.823277 1 GTATCAA 9440 0.0 18.323624 2 TATACCG 195 0.0 18.025642 5 GTATTGG 545 0.0 17.651377 1 ATTGGAC 560 0.0 17.50893 3 GGACCCT 925 0.0 16.6 6 CGGTTTA 90 4.448121E-5 16.444445 15 TTGGACC 980 0.0 16.42347 4 TGGACCC 1015 0.0 15.128079 5 GACCCTC 1015 0.0 15.128079 7 CGTTTAG 160 1.0973963E-8 15.031251 26 CGCCGGA 185 3.0559022E-10 15.0 14 TTATGCG 175 2.240995E-9 14.8 4 TATGCGG 200 6.184564E-11 14.8 5 GCATACG 75 0.0041055614 14.799999 1 CGACCGC 205 9.276846E-11 14.439025 10 ACCGCCG 270 0.0 14.388889 12 TTGATAC 1475 0.0 14.172881 34 CGGTCGA 80 0.006300378 13.875001 29 TCGGTCG 80 0.006300378 13.875001 28 >>END_MODULE