##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088321_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 868575 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.676907578505023 31.0 30.0 31.0 28.0 34.0 2 30.98341421293498 31.0 31.0 34.0 28.0 34.0 3 31.002943902368823 31.0 31.0 34.0 27.0 34.0 4 34.911066977520655 35.0 35.0 37.0 32.0 37.0 5 34.62709265175719 35.0 35.0 37.0 32.0 37.0 6 34.750530466568804 35.0 35.0 37.0 32.0 37.0 7 34.55494113922229 35.0 35.0 37.0 30.0 37.0 8 34.65031574705696 35.0 35.0 37.0 30.0 37.0 9 36.0515890970843 37.0 35.0 39.0 31.0 39.0 10 35.81508447744869 37.0 35.0 39.0 30.0 39.0 11 35.954008577267366 37.0 35.0 39.0 30.0 39.0 12 35.69398267276861 37.0 35.0 39.0 30.0 39.0 13 35.79547534755203 37.0 35.0 39.0 30.0 39.0 14 36.48853697147627 38.0 35.0 40.0 30.0 41.0 15 36.61967245200472 38.0 35.0 40.0 30.0 41.0 16 36.577994991796906 38.0 35.0 40.0 30.0 41.0 17 36.7190305960913 38.0 36.0 40.0 31.0 41.0 18 36.73380767348819 38.0 36.0 40.0 31.0 41.0 19 36.838944247762136 39.0 36.0 40.0 31.0 41.0 20 36.833213021328035 39.0 36.0 40.0 31.0 41.0 21 36.74848113289008 38.0 35.0 40.0 30.0 41.0 22 36.66588032121579 38.0 35.0 40.0 30.0 41.0 23 36.53120455919178 38.0 35.0 40.0 30.0 41.0 24 36.45604006562473 38.0 35.0 40.0 30.0 41.0 25 36.326942405664454 38.0 35.0 40.0 30.0 41.0 26 36.03362634199695 38.0 34.0 40.0 29.0 41.0 27 35.88875456926575 38.0 34.0 40.0 29.0 41.0 28 35.69741933626918 38.0 34.0 40.0 28.0 41.0 29 35.47655527732205 38.0 34.0 40.0 27.0 41.0 30 35.21246869873068 37.0 33.0 40.0 27.0 41.0 31 34.91906398411191 37.0 33.0 40.0 26.0 41.0 32 34.79858964395706 37.0 33.0 40.0 26.0 41.0 33 34.59425956307746 37.0 33.0 40.0 25.0 41.0 34 34.704585096278386 37.0 33.0 40.0 25.0 41.0 35 34.60279883717583 37.0 33.0 40.0 25.0 41.0 36 34.51104855654376 37.0 33.0 40.0 24.0 41.0 37 34.3643508044786 37.0 33.0 40.0 24.0 41.0 38 34.282653771982844 37.0 33.0 40.0 24.0 41.0 39 34.1220654520335 37.0 33.0 40.0 23.0 41.0 40 33.89111705955156 37.0 33.0 40.0 21.0 41.0 41 33.71823273752986 37.0 33.0 40.0 21.0 41.0 42 33.49971850444694 37.0 32.0 40.0 19.0 41.0 43 33.11069165011657 37.0 31.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 1.0 15 2.0 16 10.0 17 47.0 18 91.0 19 249.0 20 532.0 21 1014.0 22 1802.0 23 3153.0 24 5109.0 25 7472.0 26 11180.0 27 15836.0 28 21429.0 29 28087.0 30 34939.0 31 41615.0 32 49464.0 33 58684.0 34 68928.0 35 80204.0 36 97157.0 37 119441.0 38 132422.0 39 89706.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.405923495380364 23.677632904469963 15.370693377083153 21.545750223066516 2 19.298506173905537 24.77218432489998 35.01689548973894 20.912414011455546 3 20.50508016003224 25.378464726707538 33.841406902109775 20.275048211150448 4 14.107359755922054 17.06553838183231 35.866908441988315 32.96019342025732 5 11.302075238177475 39.826612555047056 35.38600581412083 13.485306392654635 6 31.14860547448407 37.724318567769046 13.068071266154332 18.059004691592552 7 23.496186282128775 35.232190657110785 21.82056817200587 19.45105488875457 8 26.43053276919092 34.98983967993553 19.26926287309674 19.310364677776818 9 23.379328209999137 14.51285150965662 23.773767377601242 38.334052902743 10 16.05468727513456 28.131364591428486 34.17275422387244 21.641193909564514 11 31.497107330973144 22.651239098523444 24.863137898281668 20.98851567222174 12 20.623434936533975 28.134127737961606 31.709639351811873 19.532797973692542 13 31.84722102293987 21.411852747316008 28.140690210977752 18.60023601876637 14 19.50309414846156 24.03649656045822 29.59122700975736 26.869182281322857 15 21.04585096278387 30.140172121002788 27.884984025559106 20.928992890654232 16 20.040641280257894 29.19563653109979 28.871081944564374 21.892640244077942 17 20.343436087845035 27.135480528451772 28.42057392856115 24.100509455142046 18 22.127737961603778 25.132659816365887 32.28886394381602 20.450738278214317 19 21.43844803269723 24.318222375730365 33.94514002820712 20.29818956336528 20 22.569726275796565 23.626169300290705 34.211208013124946 19.592896410787787 21 21.516967446679907 24.573468036726823 34.90809659499755 19.001467921595715 22 19.07054658492358 25.14705120455919 34.10885646029416 21.673545750223067 23 20.83849984169473 25.42785597098696 35.55306104826872 18.180583139049592 24 20.64174078231586 25.22948507613044 32.45062314710877 21.678150994444927 25 20.404800967101284 26.128083354920417 33.53676999683389 19.930345681144406 26 20.088420689059667 27.05442823014708 33.320668911723224 19.53648216907003 27 18.62970958178626 27.09288201939959 32.98932158996057 21.28808680885358 28 19.50125205077282 26.264628846098493 33.25389287050629 20.9802262326224 29 19.773652246495697 25.935584146446764 31.971677748035574 22.31908585902196 30 20.07184180986098 26.259908470771094 34.42201306738048 19.24623665198745 31 21.347609590421094 25.825979333966554 33.90265665026048 18.92375442535187 32 20.45258037590306 26.121981406326455 32.4077943758455 21.017643841924993 33 20.018190714676336 26.114152491149294 33.24122844889618 20.626428345278185 34 18.80609043548341 27.014017212100278 34.14880695391878 20.031085398497538 35 18.3615692369686 29.640157729614597 32.43542584117664 19.562847192240163 36 21.58650663442996 26.49512131940247 31.90904642661831 20.009325619549262 37 20.36531099789886 27.793224534438593 31.82108626198083 20.020378205681723 38 20.44486659183145 25.583858619002385 33.383760757562676 20.587514031603487 39 19.615807500791526 25.525372017384797 34.04000805917739 20.81881242264629 40 17.949515010217887 26.265780157153962 33.3682180583139 22.41648677431425 41 20.26491667386236 25.18101488069539 33.301442017096974 21.252626428345277 42 18.657571309328496 28.00126644216101 32.318567769047 21.02259447946349 43 19.24520047203753 28.21564056068848 30.862734939412256 21.676424027861728 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 62.0 1 87.0 2 112.0 3 283.5 4 455.0 5 455.0 6 947.0 7 1439.0 8 1675.5 9 1912.0 10 3010.5 11 4109.0 12 4109.0 13 8140.5 14 12172.0 15 20768.5 16 29365.0 17 28034.5 18 26704.0 19 26704.0 20 28640.5 21 30577.0 22 24315.5 23 18054.0 24 19057.5 25 20061.0 26 20061.0 27 21365.5 28 22670.0 29 23348.0 30 24026.0 31 25839.0 32 27652.0 33 27652.0 34 30238.0 35 32824.0 36 35754.5 37 38685.0 38 40465.5 39 42246.0 40 42246.0 41 43297.5 42 44349.0 43 46070.5 44 47792.0 45 52555.0 46 57318.0 47 57318.0 48 81691.0 49 106064.0 50 95181.0 51 84298.0 52 73672.0 53 63046.0 54 63046.0 55 53000.0 56 42954.0 57 34449.5 58 25945.0 59 22391.0 60 18837.0 61 18837.0 62 16580.5 63 14324.0 64 12298.0 65 10272.0 66 8712.0 67 7152.0 68 7152.0 69 6049.0 70 4946.0 71 4141.5 72 3337.0 73 2774.0 74 2211.0 75 2211.0 76 1735.5 77 1260.0 78 950.0 79 640.0 80 489.5 81 339.0 82 339.0 83 260.0 84 181.0 85 134.0 86 87.0 87 70.0 88 53.0 89 53.0 90 43.0 91 33.0 92 21.5 93 10.0 94 6.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 868575.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.60507678684614 #Duplication Level Percentage of deduplicated Percentage of total 1 82.52827138244795 41.76349510394456 2 9.885100636533672 10.004725535149761 3 2.9557337970644695 4.487254072857713 4 1.2688313997436336 2.568372416543522 5 0.7198032057453414 1.8212848249080502 6 0.4838404266875215 1.4690869167061453 7 0.31940507222670944 1.1314462744298537 8 0.2503289011328944 1.0134330611037548 9 0.1937736629172923 0.8825337982078215 >10 1.2095704679820938 11.63786495489179 >50 0.10847606054061212 3.7765436297437076 >100 0.06140102510248937 5.646939739007891 >500 0.009323859366009445 3.3970941763855387 >1k 0.005457868897176261 5.872844947637346 >5k 0.0 0.0 >10k+ 6.822336121470326E-4 4.5270805484824805 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 14207 1.6356676164982875 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 13973 1.6087269378004203 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 11158 1.2846328756871888 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4769 0.5490602423509772 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3873 0.445902771781366 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 3801 0.4376133321820223 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3705 0.42656074604956395 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3617 0.41642920876147715 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3374 0.38845235011369195 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 3236 0.3725642575482831 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2073 0.23866678179777223 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1811 0.20850243214460468 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1794 0.20654520335031518 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1772 0.20401231902829348 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1733 0.19952220591198228 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1707 0.19652879716777477 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1688 0.19434130616239242 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1373 0.15807500791526352 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1344 0.15473620585441672 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1293 0.14886451947154822 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1263 0.145410586305155 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1247 0.14356848861641194 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 1232 0.14184152203321532 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1164 0.13401260685605734 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1093 0.12583829836226001 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 1044 0.1201968741904844 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 1026 0.11812451429064849 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 959 0.11041073021903693 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 938 0.10799297700256168 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 938 0.10799297700256168 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 918 0.10569035489163285 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 899 0.10350286388625046 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 884 0.10177589730305384 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 870 0.10016406182540367 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.15131105546441E-4 0.0 5 1.15131105546441E-4 0.0 0.0 1.15131105546441E-4 0.0 6 2.30262211092882E-4 0.0 0.0 1.15131105546441E-4 0.0 7 2.30262211092882E-4 0.0 0.0 1.15131105546441E-4 0.0 8 2.30262211092882E-4 0.0 0.0 1.15131105546441E-4 0.0 9 2.30262211092882E-4 0.0 0.0 1.15131105546441E-4 0.0 10 2.30262211092882E-4 0.0 0.0 5.75655527732205E-4 0.0 11 2.30262211092882E-4 0.0 0.0 0.001036179949917969 0.0 12 2.30262211092882E-4 0.0 0.0 0.0016118354776501742 0.0 13 2.30262211092882E-4 0.0 0.0 0.00230262211092882 0.0 14 2.30262211092882E-4 0.0 0.0 0.0027631465331145843 0.0 15 2.30262211092882E-4 0.0 0.0 0.003914457588578994 0.0 16 2.30262211092882E-4 0.0 0.0 0.004950637538496963 0.0 17 2.30262211092882E-4 0.0 0.0 0.007022997438332902 0.0 18 2.30262211092882E-4 0.0 0.0 0.008174308493797312 0.0 19 2.30262211092882E-4 0.0 0.0 0.009901275076993926 0.0 20 2.30262211092882E-4 0.0 0.0 0.015542699248769536 0.0 21 2.30262211092882E-4 0.0 0.0 0.02740120312005296 0.0 22 2.30262211092882E-4 0.0 0.0 0.04248337794663673 0.0 23 2.30262211092882E-4 0.0 0.0 0.05031229312379472 0.0 24 2.30262211092882E-4 0.0 0.0 0.06228592810062459 0.0 25 2.30262211092882E-4 0.0 0.0 0.06838787669458596 0.0 26 2.30262211092882E-4 0.0 0.0 0.07967072503813719 0.0 27 2.30262211092882E-4 0.0 0.0 0.16152894108165675 0.0 28 2.30262211092882E-4 0.0 0.0 0.2703278358230435 0.0 29 2.30262211092882E-4 0.0 0.0 0.38453789252511295 0.0 30 2.30262211092882E-4 0.0 0.0 0.5958034712028323 0.0 31 2.30262211092882E-4 0.0 0.0 0.8588780473764499 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCTAG 20 0.0018416884 37.0 11 GGTATCA 3340 0.0 31.627245 1 TGCGGTC 40 0.0019308093 23.125 12 GTATTGG 300 0.0 22.816668 1 GTGTACC 45 0.003825067 20.555555 11 GGACCCT 490 0.0 19.632652 6 ACGATCT 85 1.2445907E-6 19.588236 30 GATACTG 380 0.0 18.986843 36 GTATCAA 5585 0.0 18.94718 2 TACCCCG 80 1.6159294E-5 18.5 5 CGATCTG 80 1.6159294E-5 18.5 31 TGTGTAC 50 0.0070335334 18.499998 10 TATTGGA 410 0.0 18.04878 2 TTGGACC 565 0.0 18.00885 4 TGGACCC 550 0.0 17.827272 5 TATACTG 115 6.3995685E-8 17.695652 5 CTTACCC 105 4.7939284E-7 17.619047 3 GACCCTC 555 0.0 17.333334 7 ATTGGAC 410 0.0 17.146341 3 GGTGTAT 65 0.0015795135 17.076923 1 >>END_MODULE