##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088320_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2960687 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.93011723292601 31.0 31.0 33.0 28.0 34.0 2 31.242638617320914 31.0 31.0 34.0 28.0 34.0 3 31.301629993308985 31.0 31.0 34.0 28.0 34.0 4 35.194972315547034 35.0 35.0 37.0 33.0 37.0 5 34.91753197821992 35.0 35.0 37.0 32.0 37.0 6 35.002139030569595 36.0 35.0 37.0 32.0 37.0 7 34.82259353994529 35.0 35.0 37.0 32.0 37.0 8 34.889931965114855 35.0 35.0 37.0 32.0 37.0 9 36.36157418869337 38.0 35.0 39.0 32.0 39.0 10 36.1465686849032 38.0 35.0 39.0 31.0 39.0 11 36.264133628445016 38.0 35.0 39.0 32.0 39.0 12 36.00544164242961 38.0 35.0 39.0 30.0 39.0 13 36.11054934209526 38.0 35.0 39.0 31.0 39.0 14 36.886383802137814 39.0 36.0 40.0 31.0 41.0 15 37.02259610691708 38.0 36.0 40.0 31.0 41.0 16 37.00879593148482 38.0 36.0 40.0 31.0 41.0 17 37.10155751013194 39.0 36.0 40.0 31.0 41.0 18 37.10276635118809 39.0 36.0 40.0 31.0 41.0 19 37.199732697174674 39.0 36.0 40.0 31.0 41.0 20 37.183914071294936 39.0 36.0 40.0 31.0 41.0 21 37.11529013367505 39.0 36.0 40.0 31.0 41.0 22 37.03234350676043 39.0 36.0 40.0 31.0 41.0 23 36.923719731265074 39.0 35.0 40.0 31.0 41.0 24 36.840586998895866 39.0 35.0 40.0 31.0 41.0 25 36.71705080611358 38.0 35.0 40.0 30.0 41.0 26 36.4726281434005 38.0 35.0 40.0 30.0 41.0 27 36.338159690639365 38.0 35.0 40.0 30.0 41.0 28 36.16621851617547 38.0 35.0 40.0 30.0 41.0 29 35.95594434670061 38.0 34.0 40.0 29.0 41.0 30 35.70959037547704 38.0 34.0 40.0 28.0 41.0 31 35.4696301905605 38.0 34.0 40.0 27.0 41.0 32 35.35385638535921 38.0 34.0 40.0 27.0 41.0 33 35.16614826221076 37.0 33.0 40.0 27.0 41.0 34 35.297422186134504 38.0 34.0 40.0 27.0 41.0 35 35.21023026074691 38.0 34.0 40.0 27.0 41.0 36 35.12750587954755 38.0 33.0 40.0 26.0 41.0 37 35.0095156968636 38.0 33.0 40.0 25.0 41.0 38 34.95073440725075 38.0 33.0 40.0 25.0 41.0 39 34.829800988757 38.0 33.0 40.0 24.0 41.0 40 34.63093903543333 38.0 33.0 40.0 24.0 41.0 41 34.48524176990003 38.0 33.0 40.0 23.0 41.0 42 34.31268857532053 38.0 33.0 40.0 22.0 41.0 43 33.93429599278816 37.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 3.0 14 4.0 15 18.0 16 25.0 17 85.0 18 243.0 19 568.0 20 1189.0 21 2403.0 22 4481.0 23 7741.0 24 12767.0 25 19939.0 26 30087.0 27 43396.0 28 60889.0 29 81481.0 30 104142.0 31 126792.0 32 153368.0 33 185596.0 34 222617.0 35 264020.0 36 321969.0 37 403428.0 38 475900.0 39 437536.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.40085966534119 22.359810408867943 14.503795909530456 22.735534016260413 2 18.417211951145124 23.81832324727335 35.78335028322818 21.981114518353344 3 19.646858989146775 25.05198962267879 33.518267888500205 21.78288349967423 4 13.33258125563425 16.259165524758274 36.49264511919024 33.91560810041723 5 11.940269268585297 38.63160813689526 35.62075288607002 13.807369708449425 6 31.570915804338657 37.23281116848894 13.58083444822097 17.61543857895144 7 24.498840978462095 34.27380199257807 21.881847017263222 19.34551001169661 8 26.33696165788548 34.42028826417653 19.585049010584367 19.657701067353624 9 23.901716054415747 14.429792814978414 23.272571534917404 38.39591959568843 10 15.89063619355913 27.551645952442794 34.34979786785972 22.207919986138354 11 31.971768714490928 22.390039879257753 24.830149218745515 20.808042187505805 12 21.014852296105598 27.17004533069521 31.731858180212903 20.083244192986292 13 31.501573790137222 21.30350151839759 27.65983030289929 19.535094388565895 14 20.022109733315276 23.36038899079842 28.928724988490846 27.688776287395463 15 21.44414455158549 29.759782104626392 27.08064040541942 21.715432938368696 16 21.03126740516644 28.78764286802354 27.896025483274663 22.28506424353537 17 20.704518917399913 26.756965528608735 27.80233101303853 24.736184540952827 18 22.720267289314947 25.27305317988697 31.27375504401512 20.732924486782967 19 21.91156984848449 24.505697495209727 32.630534737376834 20.952197918928952 20 23.146452157894434 23.886179119913724 32.633135485108696 20.33423323708315 21 21.989930039886012 24.777323641438624 33.285484078526366 19.94726224014899 22 20.001303751460387 25.246606615288954 32.67900321783424 22.07308641541642 23 21.479609293383596 25.462570004867114 33.93087482736271 19.126945874386585 24 21.361731246835618 25.305072775338967 31.183438168235956 22.149757809589463 25 21.044744007049715 26.10829851314914 32.21650920884241 20.630448270958734 26 20.814358289140326 26.877545650722283 32.002606151882986 20.3054899082544 27 19.369997571509586 26.97667804803412 31.756818603249855 21.89650577720644 28 20.151100065626657 26.235262288786355 31.87858088342334 21.735056762163644 29 20.453732528970473 26.059222065689486 30.849360300497825 22.63768510484222 30 20.742719510708156 26.41741595785032 32.88230062819879 19.95756390324273 31 22.063291391491234 25.95438153374538 32.45902049085229 19.523306583911097 32 21.17917226643681 26.1553821798792 31.09251332545453 21.57293222822946 33 20.679727374085815 26.038652515446586 32.01503569948461 21.266584410982993 34 19.618284540040875 26.895818436734448 32.81228309510597 20.673613928118712 35 19.23928466602515 29.26246509678328 31.150844381726266 20.347405855465304 36 21.989018089382633 26.6114587594028 30.82642643413505 20.573096717079515 37 21.043190313599514 27.652332043204837 30.618940806643863 20.685536836551787 38 20.729242908824876 25.78800123079542 32.06103853598844 21.421717324391267 39 20.33176759312957 25.35506117330201 32.9114154924178 21.40175574115062 40 18.72045238149119 26.110223741989614 32.437809197662574 22.73151467885663 41 20.78976940149364 25.065263568894654 32.41224080762336 21.732726221988344 42 19.17842041391069 27.561035665033152 31.63184760834225 21.628696312713906 43 19.533540695115693 27.7422098317046 30.481405160356363 22.24284431282334 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 179.0 1 305.0 2 431.0 3 1229.0 4 2027.0 5 2027.0 6 3528.0 7 5029.0 8 5718.5 9 6408.0 10 9743.0 11 13078.0 12 13078.0 13 24334.0 14 35590.0 15 59720.5 16 83851.0 17 81207.5 18 78564.0 19 78564.0 20 82834.0 21 87104.0 22 70951.5 23 54799.0 24 59700.0 25 64601.0 26 64601.0 27 70145.5 28 75690.0 29 78949.5 30 82209.0 31 88441.0 32 94673.0 33 94673.0 34 103000.0 35 111327.0 36 120944.5 37 130562.0 38 136439.5 39 142317.0 40 142317.0 41 146861.5 42 151406.0 43 157284.5 44 163163.0 45 179074.0 46 194985.0 47 194985.0 48 267912.0 49 340839.0 50 311873.5 51 282908.0 52 251023.0 53 219138.0 54 219138.0 55 189222.0 56 159306.0 57 132140.5 58 104975.0 59 92749.0 60 80523.0 61 80523.0 62 70893.0 63 61263.0 64 52974.0 65 44685.0 66 37884.5 67 31084.0 68 31084.0 69 26402.5 70 21721.0 71 18212.0 72 14703.0 73 12099.0 74 9495.0 75 9495.0 76 7545.5 77 5596.0 78 4428.5 79 3261.0 80 2465.0 81 1669.0 82 1669.0 83 1218.5 84 768.0 85 586.5 86 405.0 87 318.0 88 231.0 89 231.0 90 155.0 91 79.0 92 54.5 93 30.0 94 22.5 95 15.0 96 15.0 97 7.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2960687.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.92849210371875 #Duplication Level Percentage of deduplicated Percentage of total 1 72.7595522060591 29.77938757935802 2 14.032852717362612 11.486870032704477 3 5.368375366191158 6.591585263548592 4 2.55086129074892 4.176116247843959 5 1.432840533356704 2.932200122768901 6 0.874348389385031 2.1471456690506665 7 0.5446011738621354 1.5602793390864655 8 0.3863380980192289 1.2649788635316583 9 0.2822633355467981 1.0397351430086796 >10 1.499695327516167 11.536750978205037 >50 0.146103217941599 4.199979971802041 >100 0.10672697527182072 8.202007484125199 >500 0.007720684369349051 2.1090522373201446 >1k 0.006558430808365878 5.805865296883887 >5k 4.981086689898135E-4 1.487287695250812 >10k+ 6.64144891986418E-4 5.680758075511469 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 39114 1.321112295896189 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 38983 1.3166876471575686 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 33342 1.1261575438403317 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13303 0.4493213906096794 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 10997 0.37143406243213145 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 10604 0.3581601162162701 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 10597 0.35792368460428275 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 10249 0.34616965589405435 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 9981 0.3371177027493957 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 9710 0.32796442177102814 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 6601 0.22295501010407381 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 6093 0.2057968302627059 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5792 0.19563027094724972 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 5595 0.18897640986703423 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4965 0.16769756478817247 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4874 0.16462395383233688 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4704 0.15888204325550118 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 4137 0.13973108268452558 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 4011 0.13547531366875323 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3842 0.12976717903648716 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3768 0.12726775913833513 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3621 0.12230269528660072 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3601 0.12162717639520827 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3498 0.11814825410453723 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 3418 0.11544617853896748 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 3305 0.11162949680260022 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 3.377594456962185E-5 0.0 0.0 0.0 0.0 3 6.75518891392437E-5 0.0 0.0 3.377594456962185E-5 0.0 4 6.75518891392437E-5 3.377594456962185E-5 0.0 1.0132783370886555E-4 0.0 5 6.75518891392437E-5 3.377594456962185E-5 0.0 1.0132783370886555E-4 0.0 6 1.351037782784874E-4 3.377594456962185E-5 0.0 1.0132783370886555E-4 0.0 7 1.351037782784874E-4 3.377594456962185E-5 0.0 1.351037782784874E-4 0.0 8 1.351037782784874E-4 3.377594456962185E-5 0.0 1.351037782784874E-4 0.0 9 1.351037782784874E-4 3.377594456962185E-5 0.0 2.3643161198735294E-4 0.0 10 1.351037782784874E-4 3.377594456962185E-5 0.0 3.039835011265966E-4 0.0 11 1.351037782784874E-4 3.377594456962185E-5 0.0 5.741910576835714E-4 0.0 12 1.351037782784874E-4 3.377594456962185E-5 0.0 0.0010132783370886554 0.0 13 1.351037782784874E-4 3.377594456962185E-5 0.0 0.0011821580599367647 0.0 14 2.026556674177311E-4 3.377594456962185E-5 0.0 0.0013510377827848738 0.0 15 2.026556674177311E-4 3.377594456962185E-5 0.0 0.0016887972284810925 0.0 16 2.026556674177311E-4 3.377594456962185E-5 0.0 0.00219543639702542 0.0 17 2.3643161198735294E-4 3.377594456962185E-5 0.0 0.002870955288417857 0.0 18 2.3643161198735294E-4 3.377594456962185E-5 0.0 0.003715353902658403 0.0 19 3.3775944569621846E-4 3.377594456962185E-5 0.0 0.004525976572329327 0.0 20 3.3775944569621846E-4 3.377594456962185E-5 0.0 0.0071267243041902096 0.0 21 3.715353902658403E-4 3.377594456962185E-5 0.0 0.012902410825595546 0.0 22 3.715353902658403E-4 3.377594456962185E-5 0.0 0.020873533744026302 0.0 23 3.715353902658403E-4 3.377594456962185E-5 0.0 0.02664922026543164 0.0 24 3.715353902658403E-4 3.377594456962185E-5 0.0 0.03384349645876109 0.0 25 3.715353902658403E-4 3.377594456962185E-5 0.0 0.03914631975619172 0.0 26 4.728632239747059E-4 6.75518891392437E-5 0.0 0.04981951824019223 0.0 27 4.728632239747059E-4 6.75518891392437E-5 0.0 0.13530643394590514 0.0 28 4.728632239747059E-4 6.75518891392437E-5 0.0 0.23264870619555528 0.0 29 4.728632239747059E-4 6.75518891392437E-5 0.0 0.34627098372776316 0.0 30 5.066391685443277E-4 6.75518891392437E-5 0.0 0.538321004550633 0.0 31 5.404151131139496E-4 6.75518891392437E-5 0.0 0.7867430768602017 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9535 0.0 29.918198 1 GTATTGG 925 0.0 22.4 1 ATTGGAC 985 0.0 20.47208 3 TTAACGG 125 4.129106E-10 19.240002 35 CGTTAGA 100 2.8787326E-7 18.5 2 CGTACAA 80 1.6180735E-5 18.5 33 ACGTATA 70 1.22002115E-4 18.5 29 TTGGACC 1610 0.0 18.385092 4 GGACCCT 1710 0.0 17.526316 6 CTGTGCG 235 0.0 17.319149 9 GTATCAA 16670 0.0 17.179363 2 ACGTTTA 205 0.0 17.146343 26 TATTGGA 1210 0.0 16.971073 2 TGGACCC 1835 0.0 16.43324 5 GATACTG 1110 0.0 16.166666 36 TCACGTT 195 1.8189894E-12 16.128206 24 TGATACT 1140 0.0 15.741228 35 AGCCGTC 260 0.0 15.653846 12 TATACTG 380 0.0 15.578948 5 GACCCTC 1795 0.0 15.45961 7 >>END_MODULE