##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088319_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1166164 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.886912989939667 31.0 31.0 33.0 28.0 34.0 2 31.20860187760898 31.0 31.0 34.0 28.0 34.0 3 31.262042903056518 31.0 31.0 34.0 28.0 34.0 4 35.163984653959474 35.0 35.0 37.0 33.0 37.0 5 34.89393858839752 35.0 35.0 37.0 32.0 37.0 6 34.98151374935258 36.0 35.0 37.0 32.0 37.0 7 34.792886763782796 35.0 35.0 37.0 32.0 37.0 8 34.86832898288748 35.0 35.0 37.0 32.0 37.0 9 36.325805804329406 38.0 35.0 39.0 32.0 39.0 10 36.11101526028929 38.0 35.0 39.0 31.0 39.0 11 36.23497809913528 38.0 35.0 39.0 32.0 39.0 12 35.972983216768824 38.0 35.0 39.0 30.0 39.0 13 36.071964149124824 38.0 35.0 39.0 31.0 39.0 14 36.82352739408865 38.0 36.0 40.0 31.0 41.0 15 36.95881625568959 38.0 36.0 40.0 31.0 41.0 16 36.939999005285706 38.0 36.0 40.0 31.0 41.0 17 37.05290679527065 38.0 36.0 40.0 31.0 41.0 18 37.06555167197752 39.0 36.0 40.0 31.0 41.0 19 37.16425734287802 39.0 36.0 40.0 31.0 41.0 20 37.15653544441434 39.0 36.0 40.0 31.0 41.0 21 37.07131243975976 39.0 36.0 40.0 31.0 41.0 22 36.990968680219936 39.0 36.0 40.0 31.0 41.0 23 36.88109819888112 39.0 35.0 40.0 31.0 41.0 24 36.789966934324845 39.0 35.0 40.0 30.0 41.0 25 36.665126860372986 38.0 35.0 40.0 30.0 41.0 26 36.42225536030953 38.0 35.0 40.0 30.0 41.0 27 36.29613587797257 38.0 35.0 40.0 30.0 41.0 28 36.109974240329834 38.0 35.0 40.0 30.0 41.0 29 35.88621240237222 38.0 34.0 40.0 29.0 41.0 30 35.63256368744019 38.0 34.0 40.0 28.0 41.0 31 35.37388995029858 38.0 34.0 40.0 27.0 41.0 32 35.24993225652653 37.0 34.0 40.0 27.0 41.0 33 35.05858609938225 37.0 33.0 40.0 27.0 41.0 34 35.179683132046605 38.0 33.0 40.0 27.0 41.0 35 35.08477967078387 38.0 33.0 40.0 26.0 41.0 36 34.997690719315635 38.0 33.0 40.0 25.0 41.0 37 34.86080516977029 38.0 33.0 40.0 25.0 41.0 38 34.794606075989314 38.0 33.0 40.0 25.0 41.0 39 34.66129721034091 38.0 33.0 40.0 24.0 41.0 40 34.435236381846806 38.0 33.0 40.0 23.0 41.0 41 34.278851859601225 38.0 33.0 40.0 23.0 41.0 42 34.08266590290903 38.0 33.0 40.0 21.0 41.0 43 33.6995585526564 37.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 1.0 14 2.0 15 3.0 16 10.0 17 40.0 18 106.0 19 220.0 20 466.0 21 1010.0 22 1901.0 23 3133.0 24 5163.0 25 8027.0 26 12487.0 27 18086.0 28 24643.0 29 33251.0 30 41675.0 31 51143.0 32 61474.0 33 74196.0 34 88765.0 35 105358.0 36 127609.0 37 159648.0 38 183787.0 39 163959.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.05191379600125 22.752803207782097 14.885556405445547 22.30972659077111 2 18.398441385602712 24.07174291094563 36.01980510459935 21.510010598852304 3 19.572461506271846 25.212577304735866 33.94831258725188 21.266648601740407 4 13.198915418414561 16.585574584706784 36.6111456021623 33.60436439471635 5 11.65788002373594 38.88200973447988 35.64027015068206 13.819840091102108 6 31.07032973063823 37.558353713542864 13.568760483088141 17.802556072730766 7 23.92150675205203 34.78198606713978 21.97675455596297 19.31975262484522 8 26.07712122823205 34.62034499435757 19.566201666317944 19.736332111092437 9 23.645988042848177 14.63284752401892 23.553119458326616 38.168044974806286 10 15.87632614280667 27.760589419669962 34.47962722224318 21.883457215280185 11 31.523610744286394 22.722618774031783 25.055052291101422 20.698718190580397 12 21.122672282800703 27.531204873414033 31.644348479287647 19.701774364497616 13 31.571202678182487 21.436178787889183 27.921115726432987 19.071502807495342 14 19.882709464535004 23.73791336381504 29.19692255977718 27.182454611872775 15 21.17317975859313 30.14747496921531 27.390144096370665 21.289201175820896 16 20.594787697099207 29.10070967719806 28.37877005292566 21.925732572777072 17 20.650697500523084 27.01952727060688 27.929948103354246 24.399827125515795 18 22.613971962777104 25.316936554378287 31.577977025529858 20.49111445731475 19 21.710411228609356 24.744547079141526 33.0775088238018 20.467532868447318 20 22.84378526519426 23.93128239252798 33.20613567216961 20.01879667010815 21 21.67113716424105 24.929769740791173 33.909724532741535 19.48936856222624 22 19.62622752888959 25.306389152812127 33.25578563563958 21.8115976826587 23 21.262446791360393 25.62041016529408 34.447127505222255 18.670015538123284 24 21.00304931381864 25.542205041486447 31.637145375779053 21.817600268915864 25 20.62334285743686 26.395086797397276 32.676707564287696 20.30486278087816 26 20.31961199282434 27.216240597377382 32.461300468887735 20.00284694091054 27 18.850178877070466 27.27609495748454 32.24906616908085 21.624659996364148 28 19.810249673287807 26.50030355936215 32.26861745003276 21.42082931731729 29 20.011936571528533 26.41386631725898 31.175460741370852 22.398736369841636 30 20.30297625376877 26.706192267982892 33.422143026195286 19.568688452053056 31 21.686915390974168 26.204461808116182 32.90677812040159 19.20184468050806 32 20.905635913988082 26.43564713024926 31.470101975365385 21.18861498039727 33 20.331016906712946 26.365159617343704 32.27016097221317 21.03366250373018 34 19.15536751263116 27.260488233215913 33.332790242195784 20.25135401195715 35 18.751221955059492 29.806356567343872 31.60996223515732 19.832459242439313 36 21.63109133878254 26.877008722615344 31.193640002606838 20.29825993599528 37 20.680453178112167 28.06457753797922 30.96991503767909 20.28505424622952 38 20.46213054081587 26.074119935103468 32.46181497628121 21.001934547799454 39 19.99804487190481 25.71550828185401 33.251498074027324 21.03494877221386 40 18.265098219461414 26.54566596121986 32.816653575311875 22.372582244006846 41 20.555685135195393 25.441104338669344 32.74239300818753 21.260817517947732 42 18.80018590867151 28.132149508988448 31.865586658480282 21.202077923859765 43 19.247292833598017 28.398064080180834 30.52177909796564 21.83286398825551 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 73.0 1 127.5 2 182.0 3 489.0 4 796.0 5 796.0 6 1400.0 7 2004.0 8 2321.0 9 2638.0 10 4070.5 11 5503.0 12 5503.0 13 10278.5 14 15054.0 15 25589.5 16 36125.0 17 34594.0 18 33063.0 19 33063.0 20 34905.5 21 36748.0 22 29795.0 23 22842.0 24 25122.5 25 27403.0 26 27403.0 27 29203.5 28 31004.0 29 32124.0 30 33244.0 31 36050.5 32 38857.0 33 38857.0 34 41910.5 35 44964.0 36 48989.0 37 53014.0 38 54975.5 39 56937.0 40 56937.0 41 58304.0 42 59671.0 43 62227.5 44 64784.0 45 70664.0 46 76544.0 47 76544.0 48 107020.0 49 137496.0 50 123906.5 51 110317.0 52 97353.0 53 84389.0 54 84389.0 55 71686.0 56 58983.0 57 47747.5 58 36512.0 59 32077.0 60 27642.0 61 27642.0 62 24112.5 63 20583.0 64 18006.5 65 15430.0 66 13333.0 67 11236.0 68 11236.0 69 9598.5 70 7961.0 71 6864.5 72 5768.0 73 4788.0 74 3808.0 75 3808.0 76 3025.0 77 2242.0 78 1704.0 79 1166.0 80 887.5 81 609.0 82 609.0 83 455.0 84 301.0 85 225.5 86 150.0 87 112.5 88 75.0 89 75.0 90 54.5 91 34.0 92 20.5 93 7.0 94 5.5 95 4.0 96 4.0 97 2.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1166164.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.00000252296554 #Duplication Level Percentage of deduplicated Percentage of total 1 78.45068323989324 36.871823102033524 2 11.885177824083092 11.172067754355988 3 3.86385916143276 5.4480417100716965 4 1.691681508551194 3.1803614067984105 5 0.9847442598452577 2.3141491348601475 6 0.6097751137090729 1.7195659129660812 7 0.4116186322896248 1.3542253729278393 8 0.2848694201945059 1.0711090774286007 9 0.2226799763929734 0.9419363507055291 >10 1.384383498274289 12.232298259946788 >50 0.12665601194590603 4.1048960067941485 >100 0.06937280495975778 6.261150940555893 >500 0.006606933460955927 2.283141601328191 >1k 0.00715751124936892 6.5306182242683395 >5k 1.8352592947099797E-4 0.4766572401276808 >10k+ 5.505777884129939E-4 4.037957904831183 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16451 1.4106935216659062 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 16432 1.4090642482532474 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13930 1.1945146651757386 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5526 0.4738613093870159 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 4671 0.4005440058173636 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 4642 0.3980572200822526 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4602 0.39462717079244425 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 4371 0.3748186361438014 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 4240 0.36358522471967925 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3866 0.3315142638599717 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2914 0.24987909076253423 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2524 0.21643611018690337 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2468 0.2116340411811718 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 2318 0.1987713563443907 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2200 0.1886527109394562 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2111 0.18102085126963274 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1810 0.15520973036382532 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1715 0.14706336330053063 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1671 0.1432903090817415 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1670 0.1432045578494963 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1645 0.14106077704336611 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1545 0.1324856538188454 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 1463 0.12545405277473837 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 1454 0.1246822916845315 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1398 0.11988022267879989 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1388 0.11902271035634782 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 1298 0.11130509945427916 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 1252 0.10736054277099961 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 1225 0.10504525950037903 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 1185 0.10161521021057074 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1182 0.1013579565138351 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 8.575123224520736E-5 0.0 4 0.0 0.0 0.0 8.575123224520736E-5 0.0 5 8.575123224520736E-5 0.0 0.0 8.575123224520736E-5 0.0 6 8.575123224520736E-5 0.0 0.0 8.575123224520736E-5 0.0 7 8.575123224520736E-5 0.0 0.0 8.575123224520736E-5 0.0 8 8.575123224520736E-5 0.0 0.0 1.7150246449041472E-4 0.0 9 8.575123224520736E-5 0.0 0.0 1.7150246449041472E-4 0.0 10 8.575123224520736E-5 0.0 0.0 4.2875616122603683E-4 0.0 11 8.575123224520736E-5 0.0 0.0 0.0012862684836781105 0.0 12 8.575123224520736E-5 0.0 0.0 0.0013720197159233177 0.0 13 8.575123224520736E-5 0.0 0.0 0.0013720197159233177 0.0 14 8.575123224520736E-5 0.0 0.0 0.0015435221804137326 0.0 15 1.7150246449041472E-4 0.0 0.0 0.002401034502865806 0.0 16 2.572536967356221E-4 0.0 0.0 0.0031727955930726725 0.0 17 2.572536967356221E-4 0.0 0.0 0.00454481530899599 0.0 18 2.572536967356221E-4 0.0 0.0 0.005230825166957649 0.0 19 2.572536967356221E-4 0.0 0.0 0.0065170936506357595 0.0 20 3.4300492898082943E-4 0.0 0.0 0.010118645404934469 0.0 21 3.4300492898082943E-4 0.0 0.0 0.015692475500872948 0.0 22 3.4300492898082943E-4 0.0 0.0 0.025210862280090965 0.0 23 3.4300492898082943E-4 0.0 0.0 0.031127697305010273 0.0 24 3.4300492898082943E-4 0.0 0.0 0.03850230327809811 0.0 25 3.4300492898082943E-4 0.0 0.0 0.04433338707077221 0.0 26 3.4300492898082943E-4 0.0 0.0 0.055223793565913545 0.0 27 3.4300492898082943E-4 0.0 0.0 0.13943150363070717 0.0 28 3.4300492898082943E-4 0.0 0.0 0.244391011898841 0.0 29 3.4300492898082943E-4 0.0 0.0 0.3653860005968286 0.0 30 3.4300492898082943E-4 0.0 0.0 0.5709317042885906 0.0 31 4.2875616122603683E-4 0.0 0.0 0.8395903149128253 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4200 0.0 30.436907 1 TGCGTCG 35 8.869474E-4 26.42857 10 ACGTTTA 75 1.3737008E-8 24.666666 26 TCACGTT 85 1.9772415E-9 23.941175 24 GTATTGG 315 0.0 23.492064 1 CGTATTA 40 0.0019312042 23.125 35 ATTGGAC 335 0.0 22.641792 3 CCCTTCG 55 5.143155E-4 20.181818 14 TTACGTT 60 9.236925E-4 18.5 18 GCGCTAG 60 9.236925E-4 18.5 11 GTATCAA 7405 0.0 17.313301 2 TTGGACC 620 0.0 17.306452 4 CGAATTA 75 2.0672992E-4 17.266666 15 GCCGTCA 65 0.0015799527 17.076923 13 TATTGGA 480 0.0 16.572918 2 TTTTTAC 830 0.0 16.493977 1 ACTAGCC 80 3.382619E-4 16.1875 3 TACGTTA 80 3.382619E-4 16.1875 19 CGAACTA 70 0.002592524 15.857142 24 AATTACG 70 0.002592524 15.857142 16 >>END_MODULE