##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088318_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 764498 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.901749906474574 31.0 31.0 33.0 28.0 34.0 2 31.240683428864433 31.0 31.0 34.0 28.0 34.0 3 31.300351341664726 31.0 31.0 34.0 28.0 34.0 4 35.200310530570384 35.0 35.0 37.0 33.0 37.0 5 34.9295917059299 35.0 35.0 37.0 32.0 37.0 6 35.02438332081967 36.0 35.0 37.0 32.0 37.0 7 34.8182205839649 35.0 35.0 37.0 32.0 37.0 8 34.902618450277174 35.0 35.0 37.0 32.0 37.0 9 36.34991196837663 38.0 35.0 39.0 32.0 39.0 10 36.14180024015759 38.0 35.0 39.0 31.0 39.0 11 36.27342909987992 38.0 35.0 39.0 32.0 39.0 12 36.0132295964149 38.0 35.0 39.0 30.0 39.0 13 36.0848530669799 38.0 35.0 39.0 31.0 39.0 14 36.803597916541314 38.0 36.0 40.0 31.0 41.0 15 36.96166111618343 38.0 36.0 40.0 31.0 41.0 16 36.94696519807769 38.0 36.0 40.0 31.0 41.0 17 37.08191649945454 39.0 36.0 40.0 31.0 41.0 18 37.09808658753849 39.0 36.0 40.0 31.0 41.0 19 37.21195869707965 39.0 36.0 40.0 31.0 41.0 20 37.21264411417688 39.0 36.0 40.0 31.0 41.0 21 37.1266870547732 39.0 36.0 40.0 31.0 41.0 22 37.049230998642244 39.0 36.0 40.0 31.0 41.0 23 36.92135100418837 39.0 35.0 40.0 31.0 41.0 24 36.82685893226667 39.0 35.0 40.0 31.0 41.0 25 36.70411171775466 38.0 35.0 40.0 30.0 41.0 26 36.455207207867126 38.0 35.0 40.0 30.0 41.0 27 36.326649644603386 38.0 35.0 40.0 30.0 41.0 28 36.14627638005593 38.0 35.0 40.0 30.0 41.0 29 35.90435292178658 38.0 34.0 40.0 29.0 41.0 30 35.63569819672517 38.0 34.0 40.0 28.0 41.0 31 35.351596734066014 38.0 34.0 40.0 27.0 41.0 32 35.24410135801533 37.0 34.0 40.0 27.0 41.0 33 35.02662400686464 37.0 33.0 40.0 27.0 41.0 34 35.12420830401126 37.0 33.0 40.0 27.0 41.0 35 35.01095359307676 37.0 33.0 40.0 26.0 41.0 36 34.918562246075204 38.0 33.0 40.0 25.0 41.0 37 34.765278653443175 37.0 33.0 40.0 25.0 41.0 38 34.696984164772175 38.0 33.0 40.0 24.0 41.0 39 34.55365220052897 38.0 33.0 40.0 24.0 41.0 40 34.31411462162099 38.0 33.0 40.0 23.0 41.0 41 34.14991536930116 38.0 33.0 40.0 22.0 41.0 42 33.93444848776583 37.0 33.0 40.0 21.0 41.0 43 33.53383527491243 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 2.0 15 1.0 16 9.0 17 30.0 18 63.0 19 150.0 20 349.0 21 650.0 22 1160.0 23 2022.0 24 3388.0 25 5418.0 26 8122.0 27 11700.0 28 16306.0 29 21755.0 30 27561.0 31 33499.0 32 40498.0 33 48572.0 34 58140.0 35 68882.0 36 83903.0 37 106364.0 38 119950.0 39 106003.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.526332312183946 22.348129099095093 15.051837938097941 22.073700650623024 2 18.393638701474693 24.041004685427563 36.312325212099964 21.25303140099778 3 19.581476995361662 25.200719949561673 34.22625042838568 20.99155262669098 4 13.029726696472718 16.182906953321 36.56582489424432 34.221541455961955 5 11.530834613040192 38.916648572004114 35.65607758293678 13.89643923201892 6 31.234090867471203 37.23816151252194 13.146535373539237 18.381212246467616 7 23.645320197044335 35.016311357256654 21.635242996057542 19.703125449641465 8 26.354156583797472 34.416048178020084 19.390894416989973 19.838900821192468 9 23.257091581665353 14.568775850296534 23.786589369756364 38.38754319828175 10 15.913318282062217 27.45827981237361 34.2645762317233 22.36382567384087 11 31.309957645409142 22.431059335668635 25.284304210082958 20.974678808839265 12 21.299336296497835 27.359391391475192 31.69046877820478 19.650803533822195 13 32.04089480940434 21.521835243519277 28.016554654165216 18.420715292911165 14 19.8691167275781 23.766183822586846 29.128395365324693 27.23630408451036 15 20.737529725388427 30.087063667923264 27.738856085954446 21.436550520733867 16 20.546816342227185 29.051612953859916 28.216162763015728 22.185407940897164 17 20.574285348032305 26.524333614999644 27.592747136029132 25.308633900938915 18 23.050158404600143 24.880902239116388 31.828075416809458 20.240863939474007 19 21.720527718842952 24.16082187265369 33.29492032680268 20.823730081700674 20 23.217196120853163 23.389858443056752 33.421800972664414 19.971144463425674 21 21.951790586764126 24.357290666555045 34.28681304594649 19.404105700734338 22 19.329808580270974 24.84793943215025 33.538871259310035 22.283380728268746 23 21.195869707965226 25.483389099775277 35.04260311995584 18.27813807230366 24 20.994691941640134 25.106148086718346 31.791580880525522 22.107579091116 25 20.509798586785053 26.0476809618861 33.031217871073565 20.411302580255278 26 20.31673071741195 27.125512427763056 32.801786270206065 19.755970584618925 27 18.36446923340545 27.43905150831003 32.299234268761985 21.897244989522534 28 19.605021857480335 26.28116751122959 32.35979688632279 21.754013744967285 29 19.995343349492085 26.09555551486073 31.1987735742932 22.71032756135399 30 20.18396385602055 26.402031136772102 33.864182770916344 19.549822236291003 31 21.64348369779908 25.815894874806737 33.56097726874368 18.979644158650512 32 20.827654225387114 26.100002877705368 31.56384974192215 21.508493154985363 33 20.129941477937155 25.993266169434058 32.77680255540237 21.099989797226414 34 18.787099508435603 27.094119278271496 33.868106914602784 20.25067429869012 35 18.30102891047459 30.20125624919882 31.61839533916374 19.879319501162854 36 21.70574677762401 26.811973347216085 31.342789647585732 20.13949022757417 37 20.619543805215972 28.231990142551062 30.947759183150254 20.20070686908272 38 20.268986969226866 25.954286342148702 32.70996130794325 21.06676538068118 39 19.717906390860406 25.42164923910854 33.84639331953779 21.014051050493265 40 17.840596051265013 26.21171016797951 33.20636548427857 22.741328296476905 41 20.486776943824577 25.082080005441483 33.030694651915375 21.400448398818572 42 18.64896965067273 28.13663345097044 32.191712731753384 21.022684166603444 43 19.136217491739675 28.55102302425906 30.414991275320535 21.89776820868073 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 64.0 1 87.5 2 111.0 3 316.0 4 521.0 5 521.0 6 919.5 7 1318.0 8 1550.0 9 1782.0 10 2763.0 11 3744.0 12 3744.0 13 7158.0 14 10572.0 15 17764.0 16 24956.0 17 24074.5 18 23193.0 19 23193.0 20 24005.5 21 24818.0 22 19761.0 23 14704.0 24 15618.5 25 16533.0 26 16533.0 27 17571.5 28 18610.0 29 19067.0 30 19524.0 31 21218.0 32 22912.0 33 22912.0 34 24897.5 35 26883.0 36 29334.5 37 31786.0 38 33329.0 39 34872.0 40 34872.0 41 36398.5 42 37925.0 43 39377.0 44 40829.0 45 45922.5 46 51016.0 47 51016.0 48 75449.0 49 99882.0 50 90230.0 51 80578.0 52 69884.5 53 59191.0 54 59191.0 55 49515.5 56 39840.0 57 31223.5 58 22607.0 59 19460.5 60 16314.0 61 16314.0 62 14241.5 63 12169.0 64 10442.5 65 8716.0 66 7453.5 67 6191.0 68 6191.0 69 5302.0 70 4413.0 71 3753.0 72 3093.0 73 2604.0 74 2115.0 75 2115.0 76 1707.5 77 1300.0 78 990.5 79 681.0 80 533.0 81 385.0 82 385.0 83 278.0 84 171.0 85 141.5 86 112.0 87 76.5 88 41.0 89 41.0 90 30.5 91 20.0 92 11.0 93 2.0 94 2.0 95 2.0 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 764498.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.39137693559062 #Duplication Level Percentage of deduplicated Percentage of total 1 81.8162940857361 40.41019420661726 2 10.126705263981357 10.00343833617866 3 3.0493010868791686 4.518275381164655 4 1.395887974218504 2.7577931637793656 5 0.7662079908445999 1.89220338434336 6 0.4868408883480983 1.4427445094435225 7 0.3719177721119576 1.2858671609998753 8 0.2809198780408694 1.110001566801338 9 0.20518693665639984 0.912101879758986 >10 1.3287930243646306 12.283544842457697 >50 0.09431815313160066 3.2144975928987596 >100 0.05987607414743056 5.5761971748654116 >500 0.010862473628480071 3.8923329727094345 >1k 0.0060935827671961375 6.330193563786144 >5k 0.0 0.0 >10k+ 7.948151435473224E-4 4.370614264195498 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 11633 1.5216521168139092 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11609 1.5185128018647531 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10158 1.3287150522303524 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3899 0.5100078744483308 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 3694 0.48319289259095516 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3614 0.47272850942710115 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3421 0.44748318504430357 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3370 0.4408121407773467 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3369 0.4406813359877985 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 3348 0.4379344354072868 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2314 0.30268228301447486 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1978 0.25873187372628836 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1938 0.2534996821443614 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1917 0.2507527815638498 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1642 0.21478146443810187 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1589 0.20784881059204863 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1471 0.1924138454253641 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1307 0.17096185993946356 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1304 0.17056944557081902 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1274 0.1666453018843738 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1245 0.16285196298747676 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1236 0.16167471988154317 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1211 0.15840460014283883 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 1188 0.15539608998323085 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1041 0.13616778591964923 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 1005 0.13145881349591498 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 976 0.12766547459901792 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 973 0.12727306023037338 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 973 0.12727306023037338 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 968 0.12661903628263255 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 898 0.11746270101426035 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 891 0.11654706748742312 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCCT 889 0.11628545790832677 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 889 0.11628545790832677 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 858 0.11223050943233337 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 850 0.11118407111594798 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 842 0.1101376327995626 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 836 0.10935280406227355 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 822 0.10752153700859912 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 798 0.10438222205944292 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 795 0.10398980769079841 No Hit GCCGAGGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAA 783 0.10242015021622031 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 780 0.1020277358475758 No Hit CGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAG 773 0.10111210232073857 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 1.308047895481741E-4 0.0 6 0.0 0.0 0.0 1.308047895481741E-4 0.0 7 0.0 0.0 0.0 1.308047895481741E-4 0.0 8 0.0 0.0 0.0 1.308047895481741E-4 0.0 9 0.0 0.0 0.0 1.308047895481741E-4 0.0 10 0.0 0.0 0.0 2.616095790963482E-4 0.0 11 0.0 0.0 0.0 9.156335268372187E-4 0.0 12 0.0 0.0 0.0 0.001177243105933567 0.0 13 0.0 0.0 0.0 0.001177243105933567 0.0 14 0.0 0.0 0.0 0.001308047895481741 0.0 15 0.0 0.0 0.0 0.001438852685029915 0.0 16 0.0 0.0 0.0 0.0024852910014153077 0.0 17 0.0 0.0 0.0 0.004054948475993397 0.0 18 0.0 0.0 0.0 0.005493801161023312 0.0 19 0.0 0.0 0.0 0.007848287372890447 0.0 20 0.0 0.0 0.0 0.010725992742950276 0.0 21 0.0 0.0 0.0 0.020928766327707855 0.0 22 0.0 0.0 0.0 0.034140050072073436 0.0 23 0.0 0.0 0.0 0.0434271901299938 0.0 24 0.0 0.0 0.0 0.05336835413565503 0.0 25 0.0 0.0 0.0 0.06095503192944913 0.0 26 0.0 0.0 0.0 0.07377390130517018 0.0 27 0.0 0.0 0.0 0.17684807546913137 0.0 28 0.0 0.0 0.0 0.302028259066734 0.0 29 0.0 0.0 0.0 0.44525950362198463 0.0 30 0.0 0.0 0.0 0.6928729702366782 0.0 31 0.0 0.0 0.0 0.9976481298839238 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2965 0.0 29.575043 1 GGTCTAC 40 0.0019305985 23.125002 1 ATTGGAC 280 0.0 23.125 3 GTATTGG 275 0.0 22.2 1 CACGGGC 50 0.0070327776 18.5 19 TAGAACA 60 9.23296E-4 18.5 4 TCCTAGG 70 1.21851954E-4 18.5 2 CGTCACA 50 0.0070327776 18.5 17 TTGGACC 495 0.0 17.939394 4 TGGACCC 475 0.0 17.915789 5 TATTGGA 335 0.0 17.671642 2 GTCACCC 85 2.7211834E-5 17.411764 11 GGACCCT 500 0.0 17.02 6 TCGAACC 155 4.0017767E-10 16.709677 31 GTATCAA 5325 0.0 16.57183 2 TAAGGTC 80 3.3807114E-4 16.1875 5 TTGCAAC 80 3.3807114E-4 16.1875 11 GACTGTT 80 3.3807114E-4 16.1875 7 TTAGGTT 70 0.0025914288 15.857142 4 GCCGAGT 70 0.0025914288 15.857142 12 >>END_MODULE