##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088317_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1347669 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.94132758117906 31.0 31.0 33.0 28.0 34.0 2 31.269414819217477 31.0 31.0 34.0 28.0 34.0 3 31.321547056435964 31.0 31.0 34.0 28.0 34.0 4 35.214594236418584 35.0 35.0 37.0 33.0 37.0 5 34.94955363668675 35.0 35.0 37.0 32.0 37.0 6 35.04277905034545 36.0 35.0 37.0 32.0 37.0 7 34.83877346737218 35.0 35.0 37.0 32.0 37.0 8 34.91417180331372 36.0 35.0 37.0 32.0 37.0 9 36.37131224358504 38.0 35.0 39.0 32.0 39.0 10 36.16503829946374 38.0 35.0 39.0 31.0 39.0 11 36.28142667079231 38.0 35.0 39.0 32.0 39.0 12 36.03729847610949 38.0 35.0 39.0 30.0 39.0 13 36.10589840680464 38.0 35.0 39.0 31.0 39.0 14 36.85553425952515 39.0 36.0 40.0 31.0 41.0 15 37.00315804548446 38.0 36.0 40.0 31.0 41.0 16 36.995007676217234 38.0 36.0 40.0 31.0 41.0 17 37.11806088883843 39.0 36.0 40.0 31.0 41.0 18 37.13485952411163 39.0 36.0 40.0 31.0 41.0 19 37.234307533971624 39.0 36.0 40.0 31.0 41.0 20 37.23502952134389 39.0 36.0 40.0 31.0 41.0 21 37.15311697456868 39.0 36.0 40.0 31.0 41.0 22 37.08290463014286 39.0 36.0 40.0 31.0 41.0 23 36.95725285659906 39.0 35.0 40.0 31.0 41.0 24 36.86407196425829 39.0 35.0 40.0 31.0 41.0 25 36.74398387141056 38.0 35.0 40.0 30.0 41.0 26 36.4980970846699 38.0 35.0 40.0 30.0 41.0 27 36.37505351833425 38.0 35.0 40.0 30.0 41.0 28 36.18567689840755 38.0 35.0 40.0 30.0 41.0 29 35.9695214477739 38.0 34.0 40.0 29.0 41.0 30 35.70428272817732 38.0 34.0 40.0 29.0 41.0 31 35.429145435563186 38.0 34.0 40.0 27.0 41.0 32 35.310250514035715 37.0 34.0 40.0 27.0 41.0 33 35.11503047113201 37.0 33.0 40.0 27.0 41.0 34 35.214804228634776 38.0 33.0 40.0 27.0 41.0 35 35.100822234539784 38.0 33.0 40.0 26.0 41.0 36 35.00914467870078 38.0 33.0 40.0 25.0 41.0 37 34.8640437674236 38.0 33.0 40.0 25.0 41.0 38 34.79007604983123 38.0 33.0 40.0 24.0 41.0 39 34.65932435931968 38.0 33.0 40.0 24.0 41.0 40 34.43606775847778 38.0 33.0 40.0 23.0 41.0 41 34.28020233454951 38.0 33.0 40.0 22.0 41.0 42 34.07319082059467 38.0 33.0 40.0 21.0 41.0 43 33.68654840320583 37.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 4.0 16 15.0 17 45.0 18 101.0 19 264.0 20 562.0 21 1094.0 22 2097.0 23 3586.0 24 6010.0 25 9528.0 26 14056.0 27 20381.0 28 27976.0 29 37757.0 30 48186.0 31 57804.0 32 69920.0 33 84300.0 34 101056.0 35 120058.0 36 146278.0 37 185324.0 38 212933.0 39 198334.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.15192157718253 22.68056919020917 15.008433079636024 22.15907615297228 2 18.12477692964667 24.013685853128624 36.41643459929701 21.4451026179277 3 19.21332315279197 25.3681727486497 34.4211375345133 20.997366564045027 4 12.78800655056991 16.42717907735505 37.12165227515065 33.663162096924395 5 11.275765785218773 38.97655878409313 36.06219331304645 13.685482117641644 6 30.74389928090651 37.82063696649548 13.461391484110713 17.974072268487294 7 23.60527696340867 35.15240018135017 21.966150441985384 19.276172413255775 8 26.198050114679493 34.43197105520718 19.725615117658712 19.644363712454616 9 23.412128645832173 14.517362942977838 23.97287464503524 38.09763376615475 10 15.752903717455844 27.765348909858428 34.49140701463045 21.99034035805528 11 31.162028658372343 22.573421218414907 25.57126416056168 20.693285962651068 12 21.124178117920646 27.64113443286148 31.685673559308704 19.54901388990917 13 31.658886566360138 21.699616152037333 28.130720525589 18.51077675601353 14 19.68176161950746 23.846805113124958 29.529580334637068 26.941852932730516 15 20.76080996149648 30.130618126557785 28.012071213332057 21.096500698613678 16 20.345203458712785 29.201235614976675 28.527999085828938 21.925561840481603 17 20.449086533859575 26.789738429837 27.94944455945785 24.811730476845575 18 22.600727626739207 25.26740616575732 32.06974412856569 20.06212207893778 19 21.53229019885447 24.437454597530998 33.4988784337994 20.53137676981514 20 22.87208505946193 23.617075112657485 33.74485871530769 19.765981112572895 21 21.507358260819238 24.7476197790407 34.47983147197123 19.26519048816883 22 19.11945737417719 25.267554570150384 33.75754729091491 21.85544076475752 23 21.090119309711806 25.58276550102436 35.16249168007871 18.16462350918512 24 20.82870497132456 25.314821369342177 31.986118253072526 21.870355406260735 25 20.246959750502537 26.250882078611294 33.341124563969345 20.16103360691683 26 20.06100904598978 27.28459287851839 33.080749056333566 19.573649019158264 27 18.225766119128657 27.43678158360844 32.581368273663635 21.756084023599268 28 19.514658272914197 26.44922454994513 32.741570815979294 21.294546361161384 29 19.71366856401683 26.452192637806466 31.480059272714588 22.35407952546211 30 20.07354921720393 26.429931978846437 34.173376400288205 19.323142403661432 31 21.474635092148 26.14113702993836 33.55171039773119 18.83251748018245 32 20.50948712183778 26.346454507746337 31.91199025873564 21.232068111680242 33 19.977679979282748 26.14113702993836 33.00951494766148 20.87166804311741 34 18.733902760989533 27.362356780485413 33.97206584109303 19.931674617432023 35 18.3710540199411 30.156588895344484 31.848547380699564 19.623809704014857 36 21.694867211459194 26.955951350071867 31.36816236034219 19.98101907812675 37 20.432984657211822 28.388869967328773 31.17456882958649 20.00357654587291 38 20.20177061281368 25.917640013979693 32.891310848583736 20.989278524622886 39 19.627445611644994 25.681009209234613 33.768084002822654 20.923461176297742 40 17.817950846980974 26.483209155957432 33.235905849284954 22.462934147776643 41 20.305134272584738 25.290779857665346 33.15910657587286 21.244979293877055 42 18.520497243759408 28.175909663277853 32.26630574718273 21.03728734578001 43 19.039838417296828 28.44415060374617 30.791017675705234 21.724993303251765 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 123.0 1 153.0 2 183.0 3 524.0 4 865.0 5 865.0 6 1569.5 7 2274.0 8 2592.5 9 2911.0 10 4638.0 11 6365.0 12 6365.0 13 12010.0 14 17655.0 15 30225.5 16 42796.0 17 41725.0 18 40654.0 19 40654.0 20 42500.5 21 44347.0 22 36302.5 23 28258.0 24 30310.5 25 32363.0 26 32363.0 27 34595.5 28 36828.0 29 37242.0 30 37656.0 31 40920.0 32 44184.0 33 44184.0 34 48032.0 35 51880.0 36 55611.0 37 59342.0 38 62299.5 39 65257.0 40 65257.0 41 66976.5 42 68696.0 43 71008.0 44 73320.0 45 80503.0 46 87686.0 47 87686.0 48 127990.5 49 168295.0 50 151724.5 51 135154.0 52 117511.0 53 99868.0 54 99868.0 55 84132.0 56 68396.0 57 53493.5 58 38591.0 59 33061.5 60 27532.0 61 27532.0 62 23839.0 63 20146.0 64 17404.0 65 14662.0 66 12482.5 67 10303.0 68 10303.0 69 8990.0 70 7677.0 71 6612.0 72 5547.0 73 4536.5 74 3526.0 75 3526.0 76 2824.5 77 2123.0 78 1611.0 79 1099.0 80 824.5 81 550.0 82 550.0 83 421.5 84 293.0 85 216.5 86 140.0 87 111.0 88 82.0 89 82.0 90 57.5 91 33.0 92 20.0 93 7.0 94 4.5 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1347669.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.43526102059989 #Duplication Level Percentage of deduplicated Percentage of total 1 76.7632409314803 31.807049247830836 2 12.189872971350004 10.10181136751686 3 4.212598647627816 5.23650373618454 4 1.947154605399171 3.2272343728871133 5 1.0942477258009053 2.267022006987917 6 0.6854438771470766 1.7040927578736673 7 0.4772593144935708 1.3842754989387573 8 0.3336723799357615 1.1060641726402445 9 0.2625469240187889 0.9790830294186712 >10 1.7398744149745748 13.872494070838872 >50 0.17708889833831296 5.050011357967399 >100 0.09891595616202432 7.574257966963957 >500 0.007775841906818562 2.284655452348555 >1k 0.008499176037685406 6.033795205512187 >5k 0.0012658347290169752 3.0053960248499734 >10k+ 5.425005981501323E-4 4.366253731240531 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 20333 1.5087532621140651 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 20098 1.491315745928711 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 17841 1.323841388352778 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6374 0.47296480070403046 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 5965 0.4426161023218609 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 5784 0.4291855047493116 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5580 0.4140482566564936 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 5562 0.412712617118892 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 5519 0.40952192266795484 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5326 0.3952008987370044 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 4115 0.30534203873503063 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3218 0.2387826684445513 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3205 0.2378180398896168 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3076 0.2282459565368054 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2842 0.2108826425479847 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2505 0.18587650231622158 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2498 0.1853570869404876 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2222 0.16487728069726318 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2127 0.15782807202658813 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 2041 0.15144668312471385 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 2038 0.1512240765351136 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2015 0.14951742601484488 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2004 0.14870120185297725 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1964 0.14573311399164038 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1820 0.13504799769082765 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 1768 0.13118948347108972 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 1757 0.13037325930922206 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 1678 0.12451128578308175 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCCT 1620 0.12020755838414328 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 1596 0.11842670566734115 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 1580 0.11723947052280641 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 1562 0.11590383098520482 No Hit ACGCACATGCGAGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAA 1536 0.11397457387533586 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 1481 0.10989345306599767 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 1459 0.10826100474226238 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 1453 0.10781579156306186 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 1439 0.10677696081159395 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 1436 0.10655435422199369 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1376 0.10210222242998837 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 1361 0.10098918948198705 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 1350 0.1001729653201194 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 7.420219653342179E-5 0.0 0.0 0.0 3 0.0 7.420219653342179E-5 0.0 0.0 0.0 4 0.0 7.420219653342179E-5 0.0 0.0 0.0 5 0.0 7.420219653342179E-5 0.0 0.0 0.0 6 7.420219653342179E-5 7.420219653342179E-5 0.0 0.0 0.0 7 7.420219653342179E-5 7.420219653342179E-5 0.0 0.0 0.0 8 7.420219653342179E-5 7.420219653342179E-5 0.0 0.0 0.0 9 7.420219653342179E-5 7.420219653342179E-5 0.0 0.0 0.0 10 7.420219653342179E-5 7.420219653342179E-5 0.0 7.420219653342179E-5 0.0 11 7.420219653342179E-5 7.420219653342179E-5 0.0 1.4840439306684357E-4 0.0 12 7.420219653342179E-5 7.420219653342179E-5 0.0 2.9680878613368714E-4 0.0 13 7.420219653342179E-5 7.420219653342179E-5 0.0 4.452131792005307E-4 0.0 14 7.420219653342179E-5 7.420219653342179E-5 0.0 5.936175722673743E-4 0.0 15 7.420219653342179E-5 7.420219653342179E-5 0.0 8.904263584010614E-4 0.0 16 1.4840439306684357E-4 7.420219653342179E-5 0.0 0.0019292571098689663 0.0 17 1.4840439306684357E-4 7.420219653342179E-5 0.0 0.003042290057870293 0.0 18 1.4840439306684357E-4 7.420219653342179E-5 0.0 0.003784312023204511 0.0 19 1.4840439306684357E-4 7.420219653342179E-5 0.0 0.004600536185072151 0.0 20 1.4840439306684357E-4 7.420219653342179E-5 0.0 0.007123410867208491 0.0 21 1.4840439306684357E-4 7.420219653342179E-5 0.0 0.012688575607215124 0.0 22 1.4840439306684357E-4 7.420219653342179E-5 0.0 0.020479806243224413 0.0 23 1.4840439306684357E-4 7.420219653342179E-5 0.0 0.02619337537629789 0.0 24 1.4840439306684357E-4 7.420219653342179E-5 0.0 0.03279737086777243 0.0 25 1.4840439306684357E-4 7.420219653342179E-5 0.0 0.03888195098351301 0.0 26 1.4840439306684357E-4 7.420219653342179E-5 0.0 0.0497154716773926 0.0 27 1.4840439306684357E-4 7.420219653342179E-5 0.0 0.13883230971403215 0.0 28 1.4840439306684357E-4 7.420219653342179E-5 0.0 0.2482805496008293 0.0 29 1.4840439306684357E-4 7.420219653342179E-5 0.0 0.37516630567298054 0.0 30 1.4840439306684357E-4 7.420219653342179E-5 0.0 0.5933207634812405 0.0 31 1.4840439306684357E-4 7.420219653342179E-5 0.0 0.8622295237183611 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4780 0.0 31.078451 1 AATCGAC 35 8.8701915E-4 26.428572 6 TGGACCG 40 0.0019313595 23.125 5 GTATTGG 460 0.0 22.119566 1 ATTGGAC 530 0.0 20.943396 3 ATCGACC 45 0.003826145 20.555557 7 TGCGCTA 50 0.007035498 18.499998 5 CAATGCG 50 0.007035498 18.499998 19 TCGACCC 50 0.007035498 18.499998 8 GGACCCT 915 0.0 18.398907 6 TTGGACC 1040 0.0 17.966347 4 TATTGGA 550 0.0 17.827272 2 TGGACCC 955 0.0 17.628273 5 GTATCAA 8540 0.0 17.525175 2 AAATTCG 85 2.723679E-5 17.411766 26 CTAATAC 225 0.0 17.266666 3 TATACTG 145 2.9813236E-9 16.586206 5 GTATTAG 180 1.0913936E-11 16.444445 1 TTTTTAC 1105 0.0 16.40724 1 CACTTAC 105 9.345407E-6 15.857144 1 >>END_MODULE