##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088314_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1629568 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.95948742243343 31.0 31.0 33.0 28.0 34.0 2 31.28874094238473 31.0 31.0 34.0 28.0 34.0 3 31.350674534600582 31.0 31.0 34.0 28.0 34.0 4 35.23752000530202 35.0 35.0 37.0 33.0 37.0 5 34.96433349206661 35.0 35.0 37.0 32.0 37.0 6 35.058260226023094 36.0 35.0 37.0 32.0 37.0 7 34.871900405506246 35.0 35.0 37.0 32.0 37.0 8 34.93448999980363 36.0 35.0 37.0 32.0 37.0 9 36.410908903463984 38.0 35.0 39.0 32.0 39.0 10 36.19775609241222 38.0 35.0 39.0 32.0 39.0 11 36.323150061856886 38.0 35.0 39.0 32.0 39.0 12 36.067393321420155 38.0 35.0 39.0 31.0 39.0 13 36.1464461746917 38.0 35.0 39.0 31.0 39.0 14 36.91778864091587 39.0 36.0 40.0 31.0 41.0 15 37.073312067983665 39.0 36.0 40.0 31.0 41.0 16 37.06701346614563 39.0 36.0 40.0 31.0 41.0 17 37.17094039647318 39.0 36.0 40.0 31.0 41.0 18 37.17906770383316 39.0 36.0 40.0 31.0 41.0 19 37.27904328018223 39.0 36.0 40.0 31.0 41.0 20 37.26654058008012 39.0 36.0 40.0 31.0 41.0 21 37.18777921510486 39.0 36.0 40.0 31.0 41.0 22 37.11321712257482 39.0 36.0 40.0 31.0 41.0 23 36.99506004045244 39.0 36.0 40.0 31.0 41.0 24 36.908691137773936 39.0 35.0 40.0 31.0 41.0 25 36.791192512371374 38.0 35.0 40.0 30.0 41.0 26 36.56612979636321 38.0 35.0 40.0 30.0 41.0 27 36.438179321145235 38.0 35.0 40.0 30.0 41.0 28 36.266620355824365 38.0 35.0 40.0 30.0 41.0 29 36.03290688084204 38.0 35.0 40.0 29.0 41.0 30 35.80285695349933 38.0 34.0 40.0 29.0 41.0 31 35.56961170076978 38.0 34.0 40.0 28.0 41.0 32 35.444606177833634 38.0 34.0 40.0 27.0 41.0 33 35.25578558243657 38.0 34.0 40.0 27.0 41.0 34 35.38089297286152 38.0 34.0 40.0 27.0 41.0 35 35.28939817178541 38.0 34.0 40.0 27.0 41.0 36 35.2122360036525 38.0 34.0 40.0 26.0 41.0 37 35.0924981344749 38.0 34.0 40.0 26.0 41.0 38 35.04533901009347 38.0 33.0 40.0 25.0 41.0 39 34.92675727554788 38.0 33.0 40.0 25.0 41.0 40 34.726733711020344 38.0 33.0 40.0 24.0 41.0 41 34.59389175536093 38.0 33.0 40.0 23.0 41.0 42 34.4244124823266 38.0 33.0 40.0 23.0 41.0 43 34.03703865073443 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 2.0 15 10.0 16 15.0 17 42.0 18 107.0 19 265.0 20 595.0 21 1229.0 22 2203.0 23 3951.0 24 6411.0 25 10203.0 26 15761.0 27 22768.0 28 32389.0 29 43304.0 30 55752.0 31 68128.0 32 83477.0 33 101063.0 34 121628.0 35 145073.0 36 177991.0 37 225755.0 38 265952.0 39 245492.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.37542465242322 22.425759465085225 14.697699022072108 22.501116860419447 2 18.23820791768125 23.973654367292436 36.21831061974707 21.56982709527924 3 19.57396070615034 25.149242007697747 33.7310256460608 21.545771640091115 4 13.155940715576154 16.370841842746053 36.75753328489514 33.71568415678266 5 11.84939812269264 38.761193150577334 35.608762567748016 13.780646158982012 6 31.190106825858145 37.49687033618726 13.593418623831594 17.71960421412301 7 24.225991182939282 34.51515984604509 21.916360655093868 19.342488315921766 8 26.154355019244363 34.64163508365407 19.650299956798367 19.553709940303197 9 23.68676851779122 14.702240102898436 23.475485527452676 38.13550585185767 10 15.812718462807322 27.639288449454085 34.393041591391096 22.154951496347497 11 31.636789627680468 22.72890729322127 24.94839123006834 20.685911849029928 12 21.040852544968974 27.33012675752101 31.754428167465242 19.874592530044772 13 31.425383905427694 21.569213435708114 27.700777138480877 19.30462552038332 14 19.86906959390464 23.72745414735685 29.034811680150813 27.368664578587698 15 21.276068258581414 29.91375628387401 27.277658864189775 21.532516593354803 16 20.766853546461395 29.206820457937315 27.94096349461943 22.085362500981855 17 20.72168820202655 27.107245601288195 27.745635653130158 24.425430543555102 18 22.743696488885398 25.377216538370906 31.405255871494774 20.473831101248923 19 21.88365259995287 24.84419183489121 32.52782332495484 20.744332240201082 20 23.07525675516456 24.106450298484017 32.68412241772052 20.1341705286309 21 21.8481217107847 25.160533343806456 33.23641603173356 19.754928913675283 22 19.748853683921137 25.553950494855076 32.68375422197785 22.013441599245937 23 21.32393370512921 25.780452242557537 33.823688241300765 19.071925811012488 24 21.14198364229047 25.641151519912025 31.157153306888695 22.059711530908803 25 20.859147945958682 26.553233740476003 32.123728497368624 20.463889816196684 26 20.63362805357003 27.194446626345144 31.97037497054434 20.201550349540494 27 19.163361087110204 27.39437691461786 31.671093197706384 21.771168800565547 28 20.105512626659337 26.532430681014844 31.741664048385832 21.62039264393999 29 20.205539136752808 26.33925064802451 30.931756146414262 22.52345406880842 30 20.534153837090567 26.725181152305392 32.95493038645825 19.785734624145785 31 21.806515591862382 26.34047796716676 32.42386939360616 19.4291370473647 32 20.86172531615741 26.58882599560129 31.10450131568612 21.44494737255518 33 20.489724884141072 26.36796991595319 31.954051625952403 21.188253573953343 34 19.334510741497134 27.1771414264394 32.87840703793889 20.60994079412458 35 18.931152305396274 29.615517732306966 31.198575327939675 20.25475463435708 36 21.794549230225435 26.842635594218834 30.915800997564997 20.44701417799073 37 20.760164657136123 27.787303138009584 30.791289470583617 20.661242734270676 38 20.58674446233603 25.870905663341446 32.20933400754065 21.33301586678187 39 20.0173911122457 25.44600777629408 33.09914038567277 21.437460725787446 40 18.412732699709373 26.168285091508913 32.74585657057576 22.673125638205953 41 20.51531448825701 25.197782479773778 32.610237805357 21.676665226612208 42 18.889914382216634 27.726182644725473 31.952517477024582 21.431385496033304 43 19.299838975728537 27.951579805199906 30.73072127091352 22.01785994815804 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 246.0 1 254.0 2 262.0 3 721.0 4 1180.0 5 1180.0 6 1982.0 7 2784.0 8 3166.5 9 3549.0 10 5568.0 11 7587.0 12 7587.0 13 13784.5 14 19982.0 15 33252.0 16 46522.0 17 44881.5 18 43241.0 19 43241.0 20 45824.0 21 48407.0 22 40043.0 23 31679.0 24 34248.0 25 36817.0 26 36817.0 27 39417.0 28 42017.0 29 44146.0 30 46275.0 31 49279.5 32 52284.0 33 52284.0 34 56752.5 35 61221.0 36 67289.5 37 73358.0 38 76463.0 39 79568.0 40 79568.0 41 81696.5 42 83825.0 43 87768.5 44 91712.0 45 100225.0 46 108738.0 47 108738.0 48 150707.0 49 192676.0 50 175319.0 51 157962.0 52 140050.5 53 122139.0 54 122139.0 55 103697.0 56 85255.0 57 70053.5 58 54852.0 59 47768.0 60 40684.0 61 40684.0 62 35587.5 63 30491.0 64 26631.0 65 22771.0 66 18839.0 67 14907.0 68 14907.0 69 12617.5 70 10328.0 71 8593.5 72 6859.0 73 5590.0 74 4321.0 75 4321.0 76 3386.5 77 2452.0 78 1858.5 79 1265.0 80 989.5 81 714.0 82 714.0 83 525.0 84 336.0 85 244.5 86 153.0 87 115.0 88 77.0 89 77.0 90 61.0 91 45.0 92 32.0 93 19.0 94 11.0 95 3.0 96 3.0 97 3.5 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1629568.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.386236541600404 #Duplication Level Percentage of deduplicated Percentage of total 1 78.06613730201481 36.99260448082328 2 12.307658890938738 11.664272709587086 3 4.033734451697087 5.734304846223629 4 1.8026298652655943 3.4167938076971485 5 0.9380352758056959 2.2224980731847044 6 0.5601450636114429 1.5925899889140984 7 0.3774865367848845 1.2521366426350655 8 0.2746422188579326 1.0411408917689586 9 0.20011958689687787 0.853462267317253 >10 1.223463425275381 11.020860525422263 >50 0.12786840799576135 4.156284853905501 >100 0.07488029643579862 6.621974116337356 >500 0.005619239327342818 1.9429995925856134 >1k 0.006272639249126866 5.131668937042093 >5k 9.14759890497668E-4 2.6361805034248698 >10k+ 3.920399530704291E-4 3.720227763131143 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 21231 1.3028606354567591 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 20914 1.2834076270520776 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 17932 1.100414342942424 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7214 0.442694014610007 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6259 0.3840895255675124 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 6209 0.3810212277118844 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 5835 0.35807035975178697 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 5832 0.3578862618804493 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5792 0.35543162359594693 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5430 0.3332171471212002 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3909 0.2398795263529966 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3282 0.20140307124342158 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3219 0.19753701594533032 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3212 0.19710745424554235 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2885 0.1770407862697353 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2692 0.16519715654701123 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2635 0.16169929699159533 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 2272 0.13942345455973607 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2189 0.1343300801193936 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2154 0.132182271620454 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2104 0.129113973764826 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1976 0.12125913125441835 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1964 0.12052273976906763 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 1948 0.11954088445526667 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1948 0.11954088445526667 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 1857 0.11395658235802371 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 1715 0.10524261644804021 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 1696 0.10407666326290159 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 6.13659571125599E-5 0.0 7 0.0 0.0 0.0 6.13659571125599E-5 0.0 8 6.13659571125599E-5 0.0 0.0 6.13659571125599E-5 0.0 9 6.13659571125599E-5 0.0 0.0 6.13659571125599E-5 0.0 10 6.13659571125599E-5 0.0 0.0 2.454638284502396E-4 0.0 11 6.13659571125599E-5 0.0 0.0 6.750255282381588E-4 0.0 12 6.13659571125599E-5 0.0 0.0 0.0012886850993637578 0.0 13 6.13659571125599E-5 0.0 0.0 0.0014727829707014374 0.0 14 6.13659571125599E-5 0.0 0.0 0.0021478084989395964 0.0 15 6.13659571125599E-5 0.0 0.0 0.0026387361558400753 0.0 16 6.13659571125599E-5 0.0 0.0 0.0031910297698531146 0.0 17 6.13659571125599E-5 0.0 0.0 0.004234251040766633 0.0 18 6.13659571125599E-5 0.0 0.0 0.004541080826329432 0.0 19 6.13659571125599E-5 0.0 0.0 0.00558430209724295 0.0 20 6.13659571125599E-5 0.0 0.0 0.010002651009347262 0.0 21 6.13659571125599E-5 0.0 0.0 0.01791885947686749 0.0 22 6.13659571125599E-5 0.0 0.0 0.03025341685649203 0.0 23 6.13659571125599E-5 0.0 0.0 0.037740063624224336 0.0 24 6.13659571125599E-5 0.0 0.0 0.04731315293378368 0.0 25 6.13659571125599E-5 0.0 0.0 0.055229361401303904 0.0 26 6.13659571125599E-5 0.0 0.0 0.06768665069515356 0.0 27 6.13659571125599E-5 0.0 0.0 0.16390847144764747 0.0 28 6.13659571125599E-5 0.0 0.0 0.283326623988689 0.0 29 6.13659571125599E-5 0.0 0.0 0.4219523211059618 0.0 30 6.13659571125599E-5 0.0 0.0 0.6498654858220093 0.0 31 6.13659571125599E-5 0.0 0.0 0.9570021011703715 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5790 0.0 27.67012 1 ACGTTTA 95 1.0913936E-11 25.315786 26 GTATTGG 550 0.0 22.536362 1 ATTGGAC 610 0.0 21.229507 3 TTGGACC 1110 0.0 18.333334 4 GGACCCT 1110 0.0 17.666666 6 CGGCTTA 75 2.0679343E-4 17.266666 30 TGGACCC 1180 0.0 17.088984 5 AGGACGT 65 0.0015803174 17.076923 5 ACGACAT 65 0.0015803174 17.076923 27 TCACGTT 155 4.0199666E-10 16.709679 24 GTATCAA 9900 0.0 16.220203 2 TATACCG 115 1.2428973E-6 16.086956 5 GACCCTC 1200 0.0 16.033333 7 TATTGGA 805 0.0 15.857143 2 GCACTAG 70 0.0025931164 15.857143 1 TTAACGG 145 5.349284E-8 15.310345 35 AGACGGC 85 5.3658604E-4 15.235293 6 TAATACT 315 0.0 14.68254 4 CTTAACG 90 8.276629E-4 14.388889 30 >>END_MODULE