##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088313_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1664002 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.98871515779428 31.0 31.0 33.0 28.0 34.0 2 31.310756838032646 31.0 31.0 34.0 30.0 34.0 3 31.37498813102388 31.0 31.0 34.0 28.0 34.0 4 35.25850089122489 35.0 35.0 37.0 33.0 37.0 5 34.981070335252 35.0 35.0 37.0 32.0 37.0 6 35.07332863782616 36.0 35.0 37.0 32.0 37.0 7 34.890310227992515 36.0 35.0 37.0 32.0 37.0 8 34.95093755896928 36.0 35.0 37.0 32.0 37.0 9 36.43823505019826 38.0 35.0 39.0 32.0 39.0 10 36.224110908520544 38.0 35.0 39.0 32.0 39.0 11 36.34407711048424 38.0 35.0 39.0 32.0 39.0 12 36.09133702964299 38.0 35.0 39.0 31.0 39.0 13 36.17252563398361 38.0 35.0 39.0 32.0 39.0 14 36.964073961449564 39.0 36.0 40.0 31.0 41.0 15 37.11370178641612 39.0 36.0 40.0 31.0 41.0 16 37.10532198879569 39.0 36.0 40.0 31.0 41.0 17 37.19455204981725 39.0 36.0 40.0 31.0 41.0 18 37.195770798352406 39.0 36.0 40.0 31.0 41.0 19 37.28521600334615 39.0 36.0 40.0 31.0 41.0 20 37.28977729594075 39.0 36.0 40.0 31.0 41.0 21 37.21485611195179 39.0 36.0 40.0 31.0 41.0 22 37.137349594531734 39.0 36.0 40.0 31.0 41.0 23 37.022142401271154 39.0 36.0 40.0 31.0 41.0 24 36.93239431202607 39.0 35.0 40.0 31.0 41.0 25 36.82881991728375 39.0 35.0 40.0 31.0 41.0 26 36.60783460596802 38.0 35.0 40.0 30.0 41.0 27 36.46774402915381 38.0 35.0 40.0 30.0 41.0 28 36.30844794657699 38.0 35.0 40.0 30.0 41.0 29 36.087197611541335 38.0 35.0 40.0 30.0 41.0 30 35.86833248998499 38.0 34.0 40.0 29.0 41.0 31 35.63299803726198 38.0 34.0 40.0 28.0 41.0 32 35.51451921331825 38.0 34.0 40.0 28.0 41.0 33 35.331775442577595 38.0 34.0 40.0 27.0 41.0 34 35.46696818874016 38.0 34.0 40.0 27.0 41.0 35 35.393319238798995 38.0 34.0 40.0 27.0 41.0 36 35.325054897770556 38.0 34.0 40.0 27.0 41.0 37 35.204913816209356 38.0 34.0 40.0 26.0 41.0 38 35.155541880358314 38.0 34.0 40.0 26.0 41.0 39 35.0507096746278 38.0 34.0 40.0 25.0 41.0 40 34.85001039662212 38.0 33.0 40.0 24.0 41.0 41 34.722538795025486 38.0 33.0 40.0 24.0 41.0 42 34.553157388031984 38.0 33.0 40.0 23.0 41.0 43 34.17435676159043 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 6.0 16 18.0 17 39.0 18 112.0 19 263.0 20 627.0 21 1178.0 22 2198.0 23 3967.0 24 6364.0 25 10262.0 26 15604.0 27 22875.0 28 31945.0 29 42851.0 30 55712.0 31 68326.0 32 83338.0 33 102342.0 34 123864.0 35 147740.0 36 181573.0 37 229836.0 38 274968.0 39 257993.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.29165830329531 22.43458841996584 14.499021034830486 22.774732241908364 2 18.42744179394015 23.794021882185238 35.78096660941513 21.997569714459477 3 19.43254875895582 24.989753618084592 33.62465910497704 21.953038517982552 4 13.432736258730458 16.31007655038876 36.463057135748635 33.79413005513214 5 12.048603306967179 38.562934419549975 35.5681663844154 13.820295889067442 6 31.629228811023065 37.268164341148626 13.698841708122947 17.40376513970536 7 24.5199825480979 34.345571700034014 21.844024225932422 19.290421525935667 8 26.24389874531401 34.543588288956386 19.60454374453877 19.607969221190842 9 23.79834880006154 14.527206097108056 23.374911809000228 38.29953329383017 10 15.854968924316196 27.71991860586706 34.376220701657815 22.04889176815893 11 32.00392787989437 22.606943982038484 24.686268405927397 20.702859732139743 12 21.005563695235942 27.256818200939666 31.55254621088196 20.185071892942435 13 31.564926003694705 21.514577506517423 27.29365709896983 19.62683939081804 14 19.9993750007512 23.619262476847986 28.760602451198974 27.62076007120184 15 21.555202457689354 29.977968776479834 26.777071181404832 21.68975758442598 16 21.203039419423774 28.93067436217024 27.498765025522804 22.36752119288318 17 20.808809124027494 26.94924645523263 27.62442593218037 24.617518488559508 18 22.90868640782884 25.40159206539415 30.91564793792315 20.77407358885386 19 21.879180433677366 24.925450810756235 32.2355982745213 20.959770481045094 20 23.187291842197304 24.30447799942548 32.1502618386276 20.357968319749617 21 22.087533548637563 25.142878434040345 32.67267707610929 20.096910941212812 22 20.200636778080796 25.60597883896774 32.077725868117945 22.115658514833516 23 21.660130216189643 25.8633102604444 33.19034472314336 19.286214800222595 24 21.383027183861557 25.7115676543658 30.77977069739099 22.12563446438165 25 21.05646507636409 26.40147067130929 31.842629996838944 20.699434255487674 26 20.812354792842797 27.12003951918327 31.545214488924895 20.52239119904904 27 19.46223622327377 27.203633168710134 31.298459977812527 22.03567063020357 28 20.287595808178118 26.539150794289913 31.30891669601359 21.86433670151839 29 20.373172628398283 26.436807167299076 30.458497045075667 22.73152315922697 30 20.73555200053846 26.779835601159135 32.43583841846344 20.048773979838966 31 21.95964908696023 26.268598234857894 32.078987885831864 19.692764792350008 32 21.125996242792976 26.53608589412753 30.76510725347686 21.572810609602634 33 20.770948592609866 26.341975550510156 31.56402456247048 21.323051294409503 34 19.566743309202753 27.186806265857854 32.411319217164404 20.83513120777499 35 19.282368650999217 29.52316163081535 30.909998906251314 20.28447081193412 36 21.95111544337086 26.89167440904518 30.456994643035284 20.700215504548673 37 20.98254689597729 27.972081764324802 30.325985185113964 20.719386154583948 38 20.741020743965453 26.195100727042398 31.712882556631545 21.350995972360607 39 20.198833895632337 25.703695067674197 32.61600647114607 21.481464565547398 40 18.737717863319876 26.293417916565005 32.32039384568047 22.648470374434645 41 20.695888586672375 25.300330167872392 32.21720887354703 21.786572371908207 42 19.118186156026255 27.750687799654088 31.528688066480687 21.60243797783897 43 19.463858817477384 27.903692423446607 30.350504386412997 22.281944372663013 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 86.0 1 149.5 2 213.0 3 633.0 4 1053.0 5 1053.0 6 1889.5 7 2726.0 8 3098.5 9 3471.0 10 5416.0 11 7361.0 12 7361.0 13 13375.0 14 19389.0 15 32071.5 16 44754.0 17 43522.5 18 42291.0 19 42291.0 20 45173.5 21 48056.0 22 39800.5 23 31545.0 24 34577.5 25 37610.0 26 37610.0 27 40629.5 28 43649.0 29 45153.0 30 46657.0 31 49990.0 32 53323.0 33 53323.0 34 58615.0 35 63907.0 36 69584.5 37 75262.0 38 77896.0 39 80530.0 40 80530.0 41 83030.5 42 85531.0 43 88472.5 44 91414.0 45 100198.0 46 108982.0 47 108982.0 48 150528.5 49 192075.0 50 174339.5 51 156604.0 52 138859.0 53 121114.0 54 121114.0 55 105141.0 56 89168.0 57 75048.5 58 60929.0 59 54276.0 60 47623.0 61 47623.0 62 41299.0 63 34975.0 64 30288.5 65 25602.0 66 21410.5 67 17219.0 68 17219.0 69 14368.0 70 11517.0 71 9673.0 72 7829.0 73 6482.5 74 5136.0 75 5136.0 76 4050.5 77 2965.0 78 2312.0 79 1659.0 80 1284.0 81 909.0 82 909.0 83 682.0 84 455.0 85 340.0 86 225.0 87 166.5 88 108.0 89 108.0 90 80.5 91 53.0 92 36.5 93 20.0 94 12.5 95 5.0 96 5.0 97 3.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1664002.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.51940174686761 #Duplication Level Percentage of deduplicated Percentage of total 1 76.72807104874985 36.46072033427746 2 13.024982021785176 12.378787068778752 3 4.45618496810714 6.352657312735068 4 1.9504486540351522 3.7073661271093434 5 0.9948145652527157 2.363649649493962 6 0.5918163501698441 1.687365534245142 7 0.37978881613836213 1.2633136133132243 8 0.2739654499070372 1.0414939423115066 9 0.20510805679439725 0.8771950937099069 >10 1.1852109599869347 10.752353015968765 >50 0.12441919149875798 4.108088971044387 >100 0.0723288059725999 6.315251275142122 >500 0.005602860499875734 1.8995945612135652 >1k 0.005984873715776351 4.842141750626952 >5k 8.913641704347758E-4 2.4361378980810415 >10k+ 3.820132159006182E-4 3.513883851948936 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 20479 1.2307076553994525 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 20239 1.2162845958117838 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 17353 1.042847304270067 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6931 0.41652594167555085 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 5967 0.3585933189984147 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 5747 0.3453721810430516 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 5565 0.3344346941890695 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 5529 0.3322712352509192 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5508 0.3310092175369982 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5013 0.30126165713743136 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3839 0.23070885732108495 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3274 0.19675457120844805 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3089 0.18563679610962006 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3034 0.1823315116207793 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2674 0.16069692223927615 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2618 0.1573315416688201 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2617 0.15727144558720482 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2137 0.1284253264118673 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2115 0.12710321261633098 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 2109 0.12674263612663927 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2032 0.1221152378422622 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 1995 0.1198916828224966 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1954 0.11742774347626986 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1924 0.11562486102781126 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1844 0.11081717449858833 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 1739 0.10450708592898326 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 1738 0.10444698984736797 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 6.009608161528652E-5 6.009608161528652E-5 6 6.009608161528652E-5 0.0 0.0 6.009608161528652E-5 6.009608161528652E-5 7 1.2019216323057304E-4 0.0 0.0 6.009608161528652E-5 6.009608161528652E-5 8 1.8028824484585956E-4 0.0 0.0 6.009608161528652E-5 6.009608161528652E-5 9 1.8028824484585956E-4 0.0 0.0 1.2019216323057304E-4 6.009608161528652E-5 10 1.8028824484585956E-4 0.0 0.0 1.8028824484585956E-4 6.009608161528652E-5 11 1.8028824484585956E-4 0.0 0.0 4.2067257130700564E-4 6.009608161528652E-5 12 1.8028824484585956E-4 0.0 0.0 6.610568977681517E-4 6.009608161528652E-5 13 2.4038432646114607E-4 0.0 0.0 8.413451426140113E-4 6.009608161528652E-5 14 2.4038432646114607E-4 0.0 0.0 0.001021633387459871 6.009608161528652E-5 15 2.4038432646114607E-4 0.0 0.0 0.0016826902852280225 6.009608161528652E-5 16 2.4038432646114607E-4 0.0 0.0 0.002283651101380888 1.2019216323057304E-4 17 2.4038432646114607E-4 0.0 0.0 0.0025841315094573204 1.2019216323057304E-4 18 2.4038432646114607E-4 0.0 0.0 0.003245188407225472 1.2019216323057304E-4 19 2.4038432646114607E-4 0.0 0.0 0.004206725713070057 1.2019216323057304E-4 20 2.4038432646114607E-4 0.0 0.0 0.006310088569605085 1.2019216323057304E-4 21 2.4038432646114607E-4 0.0 0.0 0.011959120241442018 1.8028824484585956E-4 22 3.605764896917191E-4 0.0 0.0 0.019471130443352833 1.8028824484585956E-4 23 3.605764896917191E-4 0.0 0.0 0.02536054644165091 1.8028824484585956E-4 24 3.605764896917191E-4 0.0 0.0 0.03179082717448657 1.8028824484585956E-4 25 3.605764896917191E-4 0.0 0.0 0.03731966668309293 1.8028824484585956E-4 26 3.605764896917191E-4 0.0 0.0 0.048978306516458514 1.8028824484585956E-4 27 3.605764896917191E-4 0.0 0.0 0.14603347832514624 1.8028824484585956E-4 28 3.605764896917191E-4 0.0 0.0 0.26225930016911037 1.8028824484585956E-4 29 3.605764896917191E-4 0.0 0.0 0.39212693253974457 1.8028824484585956E-4 30 3.605764896917191E-4 0.0 0.0 0.6067300399879327 1.8028824484585956E-4 31 3.605764896917191E-4 0.0 0.0 0.8835325919079424 1.8028824484585956E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5125 0.0 29.45561 1 ATTGGAC 490 0.0 21.142859 3 GTATTGG 520 0.0 20.278847 1 ATAGTCG 65 6.904506E-5 19.923077 30 TCTAGAC 145 7.2759576E-12 19.13793 3 ACGTTTA 150 1.2732926E-11 18.5 26 TAACGCG 50 0.007036174 18.5 20 ACTCACG 70 1.2196135E-4 18.5 6 TTGGACC 930 0.0 17.704302 4 TAAAGCG 65 0.0015803362 17.076923 4 GTATCAA 9080 0.0 16.747797 2 GACGTCG 90 4.4478824E-5 16.444445 36 GCGCATA 80 3.383705E-4 16.1875 26 TAGTCGC 80 3.383705E-4 16.1875 31 TATTGGA 635 0.0 16.023623 2 GCGATAT 70 0.0025931473 15.857143 15 TGGACCC 1075 0.0 15.832559 5 GGACCCT 1025 0.0 15.70244 6 GTCTAGA 195 4.1836756E-11 15.179487 1 TACCCGC 75 0.0041054334 14.8 18 >>END_MODULE